Carnation DB

Dca59262.1

Annotation

9-exons
f-1
sp|F6HUF2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g04050#unknown#0F0P0C
AT4G11740.1 | Symbols: SAY1 | Ubiquitin-like superfamily protein | chr4:7071955-7075256 FORWARD LENGTH=564
Repeat List (scaffold882)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59262.1	6	543	543	59.85	538	56	4e-138
Target_name	Start	End	Length	Cov(%)
sp\|F6HUF2_VITVI	53	624	624	91.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59262.1	27	543	543	50.09	517	51	4e-103
Target_name	Start	End	Length	Cov(%)
AT4G11740.1	71	564	564	87.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold882	Augustus	mRNA	1362	5647	.	+	.	ID=Dca59262.1;Parent=Dca59262
scaffold882	Augustus	exon	1362	1910	.	+	.	ID=Dca59262.1.exon1;Parent=Dca59262.1
scaffold882	Augustus	exon	2037	2120	.	+	.	ID=Dca59262.1.exon2;Parent=Dca59262.1
scaffold882	Augus-PASA	exon	2203	2321	.	+	.	ID=Dca59262.1.exon3;Parent=Dca59262.1
scaffold882	Augus-PASA	exon	3139	3367	.	+	.	ID=Dca59262.1.exon4;Parent=Dca59262.1
scaffold882	Augus-PASA	exon	4051	4248	.	+	.	ID=Dca59262.1.exon5;Parent=Dca59262.1
scaffold882	Augus-PASA	exon	4571	4714	.	+	.	ID=Dca59262.1.exon6;Parent=Dca59262.1
scaffold882	Augus-PASA	exon	4854	4997	.	+	.	ID=Dca59262.1.exon7;Parent=Dca59262.1
scaffold882	Augus-PASA	exon	5084	5140	.	+	.	ID=Dca59262.1.exon8;Parent=Dca59262.1
scaffold882	Augus-PASA	exon	5540	5647	.	+	.	ID=Dca59262.1.exon9;Parent=Dca59262.1