Carnation DB

Dca6.1

Annotation

13-exons
f-1
sp|F6I2Z5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0048g02400#GO:0005524;GO:0004674#2F0P0C
sp|B9RMV5_RICCO#Serine/threonine-protein kinase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1340560#GO:0005524;GO:0004683#2F0P0C
Repeat List (scaffold1)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6.1	8	648	655	56.18	641	54	0
Target_name	Start	End	Length	Cov(%)
sp\|F6I2Z5_VITVI	7	686	686	99.12

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6.1	8	640	655	48.7	633	49	4e-169
Target_name	Start	End	Length	Cov(%)
AT3G61960.1	2	625	626	99.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1	Augus-PASA	mRNA	73864	78384	.	+	.	ID=Dca6.1;Parent=Dca6
scaffold1	Augus-PASA	exon	73864	74100	.	+	.	ID=Dca6.1.exon1;Parent=Dca6.1
scaffold1	Augus-PASA	exon	74513	74630	.	+	.	ID=Dca6.1.exon2;Parent=Dca6.1
scaffold1	Augus-PASA	exon	75015	75073	.	+	.	ID=Dca6.1.exon3;Parent=Dca6.1
scaffold1	Augus-PASA	exon	75367	75431	.	+	.	ID=Dca6.1.exon4;Parent=Dca6.1
scaffold1	Augus-PASA	exon	75968	76061	.	+	.	ID=Dca6.1.exon5;Parent=Dca6.1
scaffold1	Augus-PASA	exon	76140	76220	.	+	.	ID=Dca6.1.exon6;Parent=Dca6.1
scaffold1	Augustus	exon	76301	76412	.	+	.	ID=Dca6.1.exon7;Parent=Dca6.1
scaffold1	Augustus	exon	76565	76619	.	+	.	ID=Dca6.1.exon8;Parent=Dca6.1
scaffold1	Augustus	exon	76736	76980	.	+	.	ID=Dca6.1.exon9;Parent=Dca6.1
scaffold1	Augustus	exon	77054	77358	.	+	.	ID=Dca6.1.exon10;Parent=Dca6.1
scaffold1	Augus-PASA	exon	77593	77887	.	+	.	ID=Dca6.1.exon11;Parent=Dca6.1
scaffold1	Augus-PASA	exon	77973	78043	.	+	.	ID=Dca6.1.exon12;Parent=Dca6.1
scaffold1	Augus-PASA	exon	78154	78384	.	+	.	ID=Dca6.1.exon13;Parent=Dca6.1