Carnation DB

Dca60134.1

Annotation

9-exons
f-1
sp|F6GXS9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0058g00620#unknown#0F0P0C
AT5G01660.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). | chr5:244504-248442 REVERSE LENGTH=656
Repeat List (scaffold91)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60134.1	25	640	641	45.24	616	45	2e-149
Target_name	Start	End	Length	Cov(%)
sp\|F6GXS9_VITVI	23	663	664	96.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60134.1	25	641	641	40.09	617	39	8e-127
Target_name	Start	End	Length	Cov(%)
AT5G01660.1	9	656	656	98.78

seqname	source	feature	start	end	score	strand	frame	group
scaffold91	Augustus	mRNA	20080	24405	.	+	.	ID=Dca60134.1;Parent=Dca60134
scaffold91	Augustus	exon	20080	20245	.	+	.	ID=Dca60134.1.exon1;Parent=Dca60134.1
scaffold91	Augustus	exon	20336	20517	.	+	.	ID=Dca60134.1.exon2;Parent=Dca60134.1
scaffold91	Augustus	exon	20827	21435	.	+	.	ID=Dca60134.1.exon3;Parent=Dca60134.1
scaffold91	Augustus	exon	21862	22174	.	+	.	ID=Dca60134.1.exon4;Parent=Dca60134.1
scaffold91	Augustus	exon	22275	22474	.	+	.	ID=Dca60134.1.exon5;Parent=Dca60134.1
scaffold91	Augus-PASA	exon	22570	22646	.	+	.	ID=Dca60134.1.exon6;Parent=Dca60134.1
scaffold91	Augus-PASA	exon	23579	23680	.	+	.	ID=Dca60134.1.exon7;Parent=Dca60134.1
scaffold91	Augus-PASA	exon	23985	24171	.	+	.	ID=Dca60134.1.exon8;Parent=Dca60134.1
scaffold91	Augus-PASA	exon	24316	24405	.	+	.	ID=Dca60134.1.exon9;Parent=Dca60134.1