Dca60845.1
Annotation
- 4-exons
- f-1
- sp|A5BP26_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_034590#GO:0003676;GO:0008270#2F0P0C
- sp|O23302_ARATH#Retrovirus-related like polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=dl3270w#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold935)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60845.1 |
198 |
597 |
619 |
33.92 |
400 |
50 |
8e-115
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BP26_VITVI |
545 |
967 |
970 |
43.6 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60845.1 |
176 |
350 |
619 |
14.05 |
175 |
49 |
2e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
56 |
236 |
1262 |
14.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold935 |
Augustus |
mRNA |
2579 |
9349 |
. |
+ |
. |
ID=Dca60845.1;Parent=Dca60845 |
| scaffold935 |
Augustus |
exon |
2579 |
3116 |
. |
+ |
. |
ID=Dca60845.1.exon1;Parent=Dca60845.1 |
| scaffold935 |
Augustus |
exon |
7738 |
8222 |
. |
+ |
. |
ID=Dca60845.1.exon2;Parent=Dca60845.1 |
| scaffold935 |
Augustus |
exon |
8398 |
8493 |
. |
+ |
. |
ID=Dca60845.1.exon3;Parent=Dca60845.1 |
| scaffold935 |
Augustus |
exon |
8609 |
9349 |
. |
+ |
. |
ID=Dca60845.1.exon4;Parent=Dca60845.1 |
