Carnation DB

Dca61512.1

Annotation

10-exons
f-1
sp|B9GSD8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_816702#GO:0005737;GO:0008270#1F0P1C
sp|B9T078_RICCO#Pcdc2/rp-8, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0769340#GO:0005737;GO:0008270#1F0P1C
Repeat List (scaffold958)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61512.1	6	418	426	58.21	413	60	2e-136
Target_name	Start	End	Length	Cov(%)
sp\|B9GSD8_POPTR	1	394	400	98.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61512.1	12	424	426	55.63	413	57	8e-132
Target_name	Start	End	Length	Cov(%)
Os03t0300200-01	4	417	420	98.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold958	Augustus	mRNA	24516	29502	.	+	.	ID=Dca61512.1;Parent=Dca61512
scaffold958	Augustus	exon	24516	24767	.	+	.	ID=Dca61512.1.exon1;Parent=Dca61512.1
scaffold958	Augustus	exon	24847	24930	.	+	.	ID=Dca61512.1.exon2;Parent=Dca61512.1
scaffold958	Augustus	exon	25483	25616	.	+	.	ID=Dca61512.1.exon3;Parent=Dca61512.1
scaffold958	Augus-PASA	exon	25740	25837	.	+	.	ID=Dca61512.1.exon4;Parent=Dca61512.1
scaffold958	Augus-PASA	exon	26686	26774	.	+	.	ID=Dca61512.1.exon5;Parent=Dca61512.1
scaffold958	Augus-PASA	exon	26861	26972	.	+	.	ID=Dca61512.1.exon6;Parent=Dca61512.1
scaffold958	Augus-PASA	exon	28044	28201	.	+	.	ID=Dca61512.1.exon7;Parent=Dca61512.1
scaffold958	Augus-PASA	exon	28306	28376	.	+	.	ID=Dca61512.1.exon8;Parent=Dca61512.1
scaffold958	Augus-PASA	exon	29134	29248	.	+	.	ID=Dca61512.1.exon9;Parent=Dca61512.1
scaffold958	Augus-PASA	exon	29335	29502	.	+	.	ID=Dca61512.1.exon10;Parent=Dca61512.1