Dca6577.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold12590)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6577.1 |
5 |
98 |
190 |
31.57 |
94 |
56 |
7e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
1196 |
1304 |
1313 |
8.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6577.1 |
3 |
84 |
190 |
16.31 |
82 |
38 |
1e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1280 |
1359 |
1401 |
5.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12590 |
Augustus |
mRNA |
8777 |
14333 |
. |
- |
. |
ID=Dca6577.1;Parent=Dca6577 |
| scaffold12590 |
Augustus |
exon |
8777 |
9085 |
. |
- |
. |
ID=Dca6577.1.exon1;Parent=Dca6577.1 |
| scaffold12590 |
Augustus |
exon |
14070 |
14333 |
. |
- |
. |
ID=Dca6577.1.exon2;Parent=Dca6577.1 |
