Carnation DB

Dca7171.1

Annotation

6-exons
f-1
sp|F6GY85_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0075g00220#GO:0008270#1F0P0C
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc finger family protein | chr1:27098250-27099881 FORWARD LENGTH=448
Repeat List (scaffold1289)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7171.1	81	477	480	57.7	397	69	1e-135
Target_name	Start	End	Length	Cov(%)
sp\|F6GY85_VITVI	28	428	444	90.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7171.1	81	479	480	51.87	399	62	4e-124
Target_name	Start	End	Length	Cov(%)
AT1G71980.1	41	448	448	91.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1289	Augustus	mRNA	66367	74174	.	-	.	ID=Dca7171.1;Parent=Dca7171
scaffold1289	Augustus	exon	66367	66938	.	-	.	ID=Dca7171.1.exon1;Parent=Dca7171.1
scaffold1289	Augustus	exon	67094	67492	.	-	.	ID=Dca7171.1.exon2;Parent=Dca7171.1
scaffold1289	Augustus	exon	67702	67932	.	-	.	ID=Dca7171.1.exon3;Parent=Dca7171.1
scaffold1289	Augustus	exon	71143	71302	.	-	.	ID=Dca7171.1.exon4;Parent=Dca7171.1
scaffold1289	Augustus	exon	73505	73564	.	-	.	ID=Dca7171.1.exon5;Parent=Dca7171.1
scaffold1289	Augustus	exon	74154	74174	.	-	.	ID=Dca7171.1.exon6;Parent=Dca7171.1