Dca7184.1
Annotation
- 1-exons
- r-174
- sp|G7J7N4_MEDTR#Putative uncharacterized protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_3g104460#unknown#0F0P0C
- AT5G11890.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:3831770-3832633 FORWARD LENGTH=287
- Repeat List (scaffold129)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7184.1 |
16 |
269 |
269 |
41.63 |
254 |
45 |
2e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G7J7N4_MEDTR |
18 |
260 |
260 |
93.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7184.1 |
1 |
269 |
269 |
40.14 |
269 |
37 |
3e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G11890.1 |
1 |
287 |
287 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold129 |
Augus-PASA |
mRNA |
50828 |
52502 |
. |
+ |
. |
ID=Dca7184.1;Parent=Dca7184 |
| scaffold129 |
Augus-PASA |
exon |
50828 |
52502 |
. |
+ |
. |
ID=Dca7184.1.exon1;Parent=Dca7184.1 |
