Carnation DB

Dca741.1

Annotation

6-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|Q7XRT2_ORYSJ#OSJNBa0042F21.11 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0042F21.11#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold1018)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca741.1	434	1056	1114	26.21	623	41	4e-119
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	82	769	1717	40.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca741.1	1	113	1114	3.5	113	34	1e-10
Target_name	Start	End	Length	Cov(%)
AT1G21280.1	1	115	237	48.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1018	Augustus	mRNA	46796	52811	.	-	.	ID=Dca741.1;Parent=Dca741
scaffold1018	Augustus	exon	46796	47788	.	-	.	ID=Dca741.1.exon1;Parent=Dca741.1
scaffold1018	Augustus	exon	47873	48046	.	-	.	ID=Dca741.1.exon2;Parent=Dca741.1
scaffold1018	Augustus	exon	48146	48960	.	-	.	ID=Dca741.1.exon3;Parent=Dca741.1
scaffold1018	Augustus	exon	50685	50781	.	-	.	ID=Dca741.1.exon4;Parent=Dca741.1
scaffold1018	Augustus	exon	51291	52209	.	-	.	ID=Dca741.1.exon5;Parent=Dca741.1
scaffold1018	Augustus	exon	52465	52811	.	-	.	ID=Dca741.1.exon6;Parent=Dca741.1