Dca7711.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold13124)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7711.1 |
1 |
568 |
590 |
63.38 |
568 |
62 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
494 |
1085 |
1501 |
39.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7711.1 |
36 |
576 |
590 |
36.44 |
541 |
38 |
2e-99
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
562 |
1087 |
1539 |
34.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold13124 |
Augustus |
mRNA |
3585 |
5563 |
. |
+ |
. |
ID=Dca7711.1;Parent=Dca7711 |
| scaffold13124 |
Augustus |
exon |
3585 |
3962 |
. |
+ |
. |
ID=Dca7711.1.exon1;Parent=Dca7711.1 |
| scaffold13124 |
Augustus |
exon |
4055 |
5006 |
. |
+ |
. |
ID=Dca7711.1.exon2;Parent=Dca7711.1 |
| scaffold13124 |
Augustus |
exon |
5121 |
5563 |
. |
+ |
. |
ID=Dca7711.1.exon3;Parent=Dca7711.1 |
