Dca7745.1
Annotation
- 2-exons
- f-1
- sp|O65452_ARATH#LTR retrotransposon like protein#Arabidopsis thaliana (Mouse-ear cress)#Name=AT4g22040#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1315)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7745.1 |
119 |
231 |
316 |
21.51 |
113 |
60 |
6e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O65452_ARATH |
472 |
586 |
1109 |
10.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7745.1 |
119 |
216 |
316 |
11.7 |
98 |
37 |
2e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os05t0380700-01 |
41 |
140 |
174 |
57.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1315 |
Augustus |
mRNA |
23897 |
25688 |
. |
+ |
. |
ID=Dca7745.1;Parent=Dca7745 |
| scaffold1315 |
Augustus |
exon |
23897 |
24236 |
. |
+ |
. |
ID=Dca7745.1.exon1;Parent=Dca7745.1 |
| scaffold1315 |
Augustus |
exon |
25078 |
25688 |
. |
+ |
. |
ID=Dca7745.1.exon2;Parent=Dca7745.1 |
