Carnation DB

Dca7909.1

Annotation

6-exons
f-1
sp|B9SG71_RICCO#HIRA-interacting protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1086350#GO:0005506;GO:0051536;GO:0016226#2F1P0C
Repeat List (scaffold13248)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7909.1	2	262	266	71.8	261	72	7e-105
Target_name	Start	End	Length	Cov(%)
sp\|B9SG71_RICCO	1	264	271	97.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7909.1	44	266	266	65.41	223	78	1e-101
Target_name	Start	End	Length	Cov(%)
AT3G20970.1	57	279	283	78.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13248	Augustus	mRNA	5881	9736	.	-	.	ID=Dca7909.1;Parent=Dca7909
scaffold13248	Augustus	exon	5881	5940	.	-	.	ID=Dca7909.1.exon1;Parent=Dca7909.1
scaffold13248	Augustus	exon	6426	6537	.	-	.	ID=Dca7909.1.exon2;Parent=Dca7909.1
scaffold13248	Augustus	exon	6641	6744	.	-	.	ID=Dca7909.1.exon3;Parent=Dca7909.1
scaffold13248	Augustus	exon	7916	8091	.	-	.	ID=Dca7909.1.exon4;Parent=Dca7909.1
scaffold13248	Augustus	exon	8407	8568	.	-	.	ID=Dca7909.1.exon5;Parent=Dca7909.1
scaffold13248	Augustus	exon	9550	9736	.	-	.	ID=Dca7909.1.exon6;Parent=Dca7909.1