Carnation DB

Dca8127.1

Annotation

12-exons
f-1
sp|D7MTK8_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_331733#GO:0005737;GO:0043715;GO:0043716;GO:0043874;GO:0000287;GO:0008967;GO:0019509#5F1P1C
Os11t0484000-01 Class II aldolase/adducin, N-terminal family protein.
Repeat List (scaffold1337)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8127.1	12	516	516	73.64	505	75	0
Target_name	Start	End	Length	Cov(%)
sp\|D7MTK8_ARALL	13	519	519	97.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8127.1	9	516	516	71.12	508	72	0
Target_name	Start	End	Length	Cov(%)
Os11t0484000-01	15	518	519	97.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1337	Augus-PASA	mRNA	40196	47471	.	+	.	ID=Dca8127.1;Parent=Dca8127
scaffold1337	Augus-PASA	exon	40196	40400	.	+	.	ID=Dca8127.1.exon1;Parent=Dca8127.1
scaffold1337	Augus-PASA	exon	41544	41680	.	+	.	ID=Dca8127.1.exon2;Parent=Dca8127.1
scaffold1337	Augus-PASA	exon	42079	42174	.	+	.	ID=Dca8127.1.exon3;Parent=Dca8127.1
scaffold1337	Augustus	exon	43341	43460	.	+	.	ID=Dca8127.1.exon4;Parent=Dca8127.1
scaffold1337	Augustus	exon	43748	43837	.	+	.	ID=Dca8127.1.exon5;Parent=Dca8127.1
scaffold1337	Augustus	exon	44225	44398	.	+	.	ID=Dca8127.1.exon6;Parent=Dca8127.1
scaffold1337	Augustus	exon	44561	44716	.	+	.	ID=Dca8127.1.exon7;Parent=Dca8127.1
scaffold1337	Augustus	exon	46249	46398	.	+	.	ID=Dca8127.1.exon8;Parent=Dca8127.1
scaffold1337	Augustus	exon	46482	46583	.	+	.	ID=Dca8127.1.exon9;Parent=Dca8127.1
scaffold1337	Augustus	exon	46723	46832	.	+	.	ID=Dca8127.1.exon10;Parent=Dca8127.1
scaffold1337	Augustus	exon	47157	47275	.	+	.	ID=Dca8127.1.exon11;Parent=Dca8127.1
scaffold1337	Augustus	exon	47380	47471	.	+	.	ID=Dca8127.1.exon12;Parent=Dca8127.1