Carnation DB

Dca8597.1

Annotation

5-exons
f-1
sp|B9ID89_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_835311#GO:0003676;GO:0008270#2F0P0C
AT5G52380.1 | Symbols: | VASCULAR-RELATED NAC-DOMAIN 6 | chr5:21261521-21263061 REVERSE LENGTH=268
Repeat List (scaffold13634)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8597.1	1	282	282	60.28	282	60	3e-88
Target_name	Start	End	Length	Cov(%)
sp\|B9ID89_POPTR	1	278	278	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8597.1	1	282	282	51.41	282	52	2e-72
Target_name	Start	End	Length	Cov(%)
AT5G52380.1	1	268	268	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13634	Augustus	mRNA	293	4115	.	+	.	ID=Dca8597.1;Parent=Dca8597
scaffold13634	Augustus	exon	293	619	.	+	.	ID=Dca8597.1.exon1;Parent=Dca8597.1
scaffold13634	Augustus	exon	2281	2422	.	+	.	ID=Dca8597.1.exon2;Parent=Dca8597.1
scaffold13634	Augustus	exon	3042	3133	.	+	.	ID=Dca8597.1.exon3;Parent=Dca8597.1
scaffold13634	Augustus	exon	3230	3323	.	+	.	ID=Dca8597.1.exon4;Parent=Dca8597.1
scaffold13634	Augustus	exon	3922	4115	.	+	.	ID=Dca8597.1.exon5;Parent=Dca8597.1