Carnation DB

Dca8729.1

Annotation

5-exons
f-1
sp|A2I5F1_BETVU#Transposon-like protein#Beta vulgaris (Sugar beet)#unknown#unknown#0F0P0C
Repeat List (scaffold1371)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8729.1	43	940	1029	45.67	898	49	0
Target_name	Start	End	Length	Cov(%)
sp\|A2I5F1_BETVU	2	953	1399	68.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8729.1	3	674	1029	23.03	672	32	2e-100
Target_name	Start	End	Length	Cov(%)
Os08t0208400-02	54	792	829	89.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1371	Augustus	mRNA	16275	19809	.	+	.	ID=Dca8729.1;Parent=Dca8729
scaffold1371	Augustus	exon	16275	17058	.	+	.	ID=Dca8729.1.exon1;Parent=Dca8729.1
scaffold1371	Augustus	exon	17223	18330	.	+	.	ID=Dca8729.1.exon2;Parent=Dca8729.1
scaffold1371	Augustus	exon	18434	18751	.	+	.	ID=Dca8729.1.exon3;Parent=Dca8729.1
scaffold1371	Augustus	exon	18843	18945	.	+	.	ID=Dca8729.1.exon4;Parent=Dca8729.1
scaffold1371	Augustus	exon	19033	19809	.	+	.	ID=Dca8729.1.exon5;Parent=Dca8729.1