Dca8768.1
Annotation
- 2-exons
- f-1
- sp|Q2RBA0_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g02700#GO:0003676#1F0P0C
- Repeat List (scaffold13730)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8768.1 |
46 |
347 |
351 |
49.57 |
302 |
58 |
7e-96
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2RBA0_ORYSJ |
484 |
779 |
978 |
30.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8768.1 |
90 |
347 |
351 |
30.48 |
258 |
41 |
2e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
98 |
359 |
1262 |
20.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold13730 |
Augustus |
mRNA |
2552 |
5002 |
. |
- |
. |
ID=Dca8768.1;Parent=Dca8768 |
| scaffold13730 |
Augustus |
exon |
2552 |
3362 |
. |
- |
. |
ID=Dca8768.1.exon1;Parent=Dca8768.1 |
| scaffold13730 |
Augustus |
exon |
4758 |
5002 |
. |
- |
. |
ID=Dca8768.1.exon2;Parent=Dca8768.1 |
