Dca8852.1
Annotation
- 3-exons
- f-1
- sp|B9I3G5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_662054#GO:0016021;GO:0055085#0F1P1C
- AT1G12940.1 | Symbols: ATNRT2.5, NRT2.5 | nitrate transporter2.5 | chr1:4416405-4418337 FORWARD LENGTH=502
- Repeat List (scaffold1378)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8852.1 |
9 |
496 |
516 |
67.63 |
488 |
71 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I3G5_POPTR |
11 |
502 |
508 |
96.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8852.1 |
13 |
488 |
516 |
67.63 |
476 |
74 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G12940.1 |
19 |
494 |
502 |
94.82 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1378 |
Augustus |
mRNA |
86893 |
89420 |
. |
+ |
. |
ID=Dca8852.1;Parent=Dca8852 |
| scaffold1378 |
Augustus |
exon |
86893 |
87394 |
. |
+ |
. |
ID=Dca8852.1.exon1;Parent=Dca8852.1 |
| scaffold1378 |
Augustus |
exon |
88270 |
88912 |
. |
+ |
. |
ID=Dca8852.1.exon2;Parent=Dca8852.1 |
| scaffold1378 |
Augustus |
exon |
89015 |
89420 |
. |
+ |
. |
ID=Dca8852.1.exon3;Parent=Dca8852.1 |
