Dca9354.1
Annotation
- 4-exons
- f-1
- sp|B9IJW2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_908030#GO:0003676;GO:0000166#2F0P0C
- AT1G14340.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:4897709-4898776 FORWARD LENGTH=244
- Repeat List (scaffold14)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9354.1 |
1 |
240 |
241 |
68.46 |
240 |
69 |
4e-90
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IJW2_POPTR |
1 |
228 |
231 |
98.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9354.1 |
5 |
240 |
241 |
58.5 |
236 |
60 |
4e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G14340.1 |
6 |
240 |
244 |
96.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold14 |
Augustus |
mRNA |
522826 |
524894 |
. |
+ |
. |
ID=Dca9354.1;Parent=Dca9354 |
| scaffold14 |
Augustus |
exon |
522826 |
522941 |
. |
+ |
. |
ID=Dca9354.1.exon1;Parent=Dca9354.1 |
| scaffold14 |
Augus-PASA |
exon |
523541 |
523616 |
. |
+ |
. |
ID=Dca9354.1.exon2;Parent=Dca9354.1 |
| scaffold14 |
Augus-PASA |
exon |
524050 |
524163 |
. |
+ |
. |
ID=Dca9354.1.exon3;Parent=Dca9354.1 |
| scaffold14 |
Augus-PASA |
exon |
524475 |
524894 |
. |
+ |
. |
ID=Dca9354.1.exon4;Parent=Dca9354.1 |
