scaffold10305 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold10305 |
1 |
2986 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold10305 |
3115 |
3184 |
+ |
Ogre-SD1_I-int |
LTR/Gypsy |
| scaffold10305 |
6048 |
6071 |
+ |
(A)n |
Simple_repeat |
| scaffold10305 |
6334 |
6812 |
- |
RS150 |
Unspecified |
| scaffold10305 |
7324 |
7369 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold10305 |
7419 |
7490 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold10305 |
8878 |
8909 |
+ |
(AAGACA)n |
Simple_repeat |
| scaffold10305 |
12175 |
12283 |
+ |
RS2619 |
Unspecified |
| scaffold10305 |
12252 |
12400 |
+ |
PL909 |
Unspecified |
| scaffold10305 |
12452 |
12481 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold10305 |
12567 |
12822 |
+ |
RS6435 |
Unspecified |
| scaffold10305 |
12899 |
12954 |
+ |
(CAC)n |
Simple_repeat |
| scaffold10305 |
13927 |
13966 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold10305 |
13966 |
13996 |
+ |
(TCAAT)n |
Simple_repeat |
| scaffold10305 |
14165 |
14376 |
- |
RS2725 |
Unspecified |
| scaffold10305 |
14880 |
14952 |
+ |
A-rich |
Low_complexity |
| scaffold10305 |
15109 |
15409 |
- |
RS155 |
Unspecified |
| scaffold10305 |
15410 |
15686 |
- |
RS2725 |
Unspecified |
| scaffold10305 |
16530 |
16759 |
+ |
RS1941 |
Unspecified |
| scaffold10305 |
16759 |
17014 |
+ |
RS6435 |
Unspecified |
| scaffold10305 |
17091 |
17146 |
+ |
(CAC)n |
Simple_repeat |
| scaffold10305 |
18119 |
18158 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold10305 |
18497 |
18533 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold10305 |
18846 |
18903 |
+ |
(A)n |
Simple_repeat |
| scaffold10305 |
19795 |
19970 |
+ |
RS10837 |
Unspecified |
| scaffold10305 |
20262 |
20280 |
+ |
(TG)n |
Simple_repeat |
| scaffold10305 |
20844 |
20997 |
- |
RS2814 |
Unspecified |
| scaffold10305 |
21510 |
21674 |
+ |
PL510 |
Unspecified |
| scaffold10305 |
22334 |
22442 |
+ |
RS6046 |
Unspecified |
| scaffold10305 |
22682 |
22869 |
+ |
RS6046 |
Unspecified |
| scaffold10305 |
22997 |
23075 |
+ |
RS6046 |
Unspecified |
| scaffold10305 |
23278 |
23327 |
+ |
RS6046 |
Unspecified |
| scaffold10305 |
23946 |
24132 |
- |
PL522 |
Unspecified |
| scaffold10305 |
29103 |
29129 |
+ |
A-rich |
Low_complexity |
| scaffold10305 |
29328 |
29409 |
+ |
(AATT)n |
Simple_repeat |
| scaffold10305 |
29418 |
29510 |
+ |
(TGA)n |
Simple_repeat |
| scaffold10305 |
29511 |
29608 |
+ |
G-rich |
Low_complexity |
| scaffold10305 |
29657 |
29673 |
+ |
(T)n |
Simple_repeat |
| scaffold10305 |
29794 |
30580 |
+ |
PL761 |
Unspecified |
| scaffold10305 |
30757 |
30782 |
+ |
(TTA)n |
Simple_repeat |
| scaffold10305 |
31286 |
31453 |
+ |
RS8828 |
Unspecified |
| scaffold10305 |
31478 |
31550 |
+ |
(ATG)n |
Simple_repeat |
| scaffold10305 |
31551 |
31648 |
+ |
G-rich |
Low_complexity |
| scaffold10305 |
32215 |
33806 |
+ |
Copia-24_Pru-I |
LTR/Copia |
| scaffold10305 |
36204 |
36346 |
+ |
RS2628 |
Unspecified |
| scaffold10305 |
36822 |
37103 |
+ |
RS29 |
Unspecified |
| scaffold10305 |
37108 |
37283 |
+ |
RS640 |
Unspecified |
| scaffold10305 |
37332 |
38135 |
- |
RS351 |
Unspecified |
| scaffold10305 |
40578 |
40754 |
+ |
RS10891 |
Unspecified |
| scaffold10305 |
40855 |
41401 |
+ |
RS1592 |
Unspecified |
| scaffold10305 |
41343 |
41542 |
+ |
RS8670 |
Unspecified |
| scaffold10305 |
41555 |
41819 |
- |
Copia-83_VV-I |
LTR/Copia |
| scaffold10305 |
41825 |
42192 |
+ |
RS1592 |
Unspecified |
| scaffold10305 |
42146 |
42345 |
+ |
RS8670 |
Unspecified |
| scaffold10305 |
42402 |
42451 |
+ |
(TATATC)n |
Simple_repeat |
| scaffold10305 |
42948 |
43177 |
- |
RS6798 |
Unspecified |
| scaffold10305 |
43375 |
43424 |
+ |
(TAA)n |
Simple_repeat |
| scaffold10305 |
43526 |
43598 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold10305 |
43837 |
43870 |
+ |
(ATGATA)n |
Simple_repeat |
| scaffold10305 |
44281 |
44327 |
+ |
A-rich |
Low_complexity |
| scaffold10305 |
44554 |
44702 |
+ |
RS3451 |
Unspecified |
| scaffold10305 |
44616 |
44874 |
+ |
RS264 |
Unspecified |
| scaffold10305 |
44901 |
45436 |
+ |
RS402 |
Unspecified |
| scaffold10305 |
45716 |
45868 |
+ |
RS3578 |
Unspecified |
| scaffold10305 |
47232 |
47554 |
+ |
RS210 |
Unspecified |
| scaffold10305 |
47619 |
47685 |
+ |
(ATT)n |
Simple_repeat |
| scaffold10305 |
48148 |
48174 |
+ |
(T)n |
Simple_repeat |
| scaffold10305 |
48291 |
48320 |
+ |
(T)n |
Simple_repeat |
| scaffold10305 |
48909 |
49039 |
- |
RS2414 |
Unspecified |
| scaffold10305 |
51160 |
52028 |
+ |
RS13052 |
Unspecified |
| scaffold10305 |
52017 |
52207 |
+ |
RS3892 |
Unspecified |
| scaffold10305 |
52935 |
53126 |
+ |
RS5315 |
Unspecified |
| scaffold10305 |
54048 |
54221 |
+ |
RS12369 |
Unspecified |
| scaffold10305 |
54391 |
54569 |
- |
RS10028 |
Unspecified |
| scaffold10305 |
54930 |
55122 |
- |
RS5537 |
Unspecified |
| scaffold10305 |
55080 |
55211 |
- |
RS9663 |
Unspecified |
| scaffold10305 |
55429 |
55764 |
+ |
RS2505 |
Unspecified |
| scaffold10305 |
55776 |
56014 |
- |
RS2134 |
Unspecified |
| scaffold10305 |
56147 |
56357 |
+ |
RS5143 |
Unspecified |
| scaffold10305 |
56466 |
56514 |
+ |
(ACATTT)n |
Simple_repeat |
| scaffold10305 |
57059 |
57175 |
- |
RS972 |
Unspecified |
| scaffold10305 |
57366 |
57610 |
+ |
RS5215 |
Unspecified |
| scaffold10305 |
57650 |
57837 |
+ |
RS3698 |
Unspecified |
| scaffold10305 |
57887 |
58025 |
+ |
RS6409 |
Unspecified |
| scaffold10305 |
59011 |
59311 |
+ |
RS5143 |
Unspecified |
| scaffold10305 |
59799 |
60158 |
+ |
RS148 |
Unspecified |
| scaffold10305 |
60290 |
60863 |
+ |
RS16282 |
Unspecified |
| scaffold10305 |
60887 |
61777 |
+ |
RS10637 |
Unspecified |
| scaffold10305 |
61709 |
61881 |
+ |
RS10891 |
Unspecified |
| scaffold10305 |
62168 |
62224 |
+ |
G-rich |
Low_complexity |
| scaffold10305 |
62602 |
62822 |
- |
RS6125 |
Unspecified |
| scaffold10305 |
63020 |
63054 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold10305 |
63282 |
63384 |
- |
RS11199 |
Unspecified |
| scaffold10305 |
63603 |
63643 |
+ |
A-rich |
Low_complexity |
| scaffold10305 |
63774 |
63884 |
- |
RS135 |
Unspecified |
| scaffold10305 |
64791 |
64953 |
+ |
PL24 |
Unspecified |
| scaffold10305 |
64941 |
65051 |
+ |
PL24 |
Unspecified |
| scaffold10305 |
66988 |
67430 |
+ |
RS1814 |
Unspecified |
| scaffold10305 |
67920 |
68142 |
+ |
RS4 |
Unspecified |
| scaffold10305 |
68752 |
69345 |
+ |
RS2610 |
Unspecified |
| scaffold10305 |
69062 |
69470 |
+ |
RS7775 |
Unspecified |
| scaffold10305 |
69523 |
69547 |
+ |
(A)n |
Simple_repeat |
| scaffold10305 |
69831 |
69855 |
+ |
(A)n |
Simple_repeat |
| scaffold10305 |
70140 |
70591 |
- |
PL2 |
Unspecified |
| scaffold10305 |
70643 |
70701 |
+ |
(TGAAT)n |
Simple_repeat |
| scaffold10305 |
70830 |
70975 |
+ |
(ATA)n |
Simple_repeat |
| scaffold10305 |
70980 |
71003 |
+ |
(CTTT)n |
Simple_repeat |
| scaffold10305 |
73579 |
74712 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold10305 |
75816 |
75892 |
+ |
(AAT)n |
Simple_repeat |
| scaffold10305 |
76278 |
76372 |
+ |
(AAT)n |
Simple_repeat |
| scaffold10305 |
76371 |
76486 |
+ |
RS933 |
Unspecified |
| scaffold10305 |
77309 |
77354 |
+ |
RS9492 |
Unspecified |
| scaffold10305 |
77347 |
78059 |
+ |
PL355 |
Unspecified |
| scaffold10305 |
78176 |
78217 |
+ |
A-rich |
Low_complexity |
| scaffold10305 |
78219 |
78304 |
+ |
(AAC)n |
Simple_repeat |
| scaffold10305 |
78938 |
78960 |
+ |
(T)n |
Simple_repeat |
| scaffold10305 |
79161 |
79194 |
+ |
A-rich |
Low_complexity |
| scaffold10305 |
79350 |
79399 |
+ |
(A)n |
Simple_repeat |
| scaffold10305 |
79609 |
79775 |
- |
RS9567 |
Unspecified |
| scaffold10305 |
80543 |
80571 |
+ |
(T)n |
Simple_repeat |
| scaffold10305 |
81014 |
81615 |
- |
RS2912 |
Unspecified |
| scaffold10305 |
81665 |
81919 |
- |
RS9567 |
Unspecified |
| scaffold10305 |
82462 |
82480 |
+ |
(A)n |
Simple_repeat |
| scaffold10305 |
82576 |
82910 |
- |
RS7911 |
Unspecified |
| scaffold10305 |
83551 |
83703 |
+ |
RS26 |
Unspecified |
| scaffold10305 |
83701 |
84101 |
+ |
RS1807 |
Unspecified |
| scaffold10305 |
85809 |
85924 |
+ |
G-rich |
Low_complexity |
| scaffold10305 |
85957 |
87223 |
- |
Copia-27_ST-I |
LTR/Copia |
| scaffold10305 |
87621 |
88512 |
- |
Copia-27_ST-I |
LTR/Copia |
| scaffold10305 |
88616 |
88952 |
- |
Copia-27_ST-I |
LTR/Copia |
| scaffold10305 |
88996 |
89121 |
+ |
RS13654 |
Unspecified |
| scaffold10305 |
89452 |
90096 |
- |
Copia-27_ST-I |
LTR/Copia |
| scaffold10305 |
91558 |
91593 |
+ |
(GATT)n |
Simple_repeat |
| scaffold10305 |
93590 |
93784 |
- |
RS8 |
Unspecified |
| scaffold10305 |
94020 |
94184 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold10305 |
97147 |
97315 |
+ |
RS4680 |
Unspecified |
| scaffold10305 |
97388 |
97423 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold10305 |
97665 |
97724 |
+ |
(TATTTA)n |
Simple_repeat |
| scaffold10305 |
97988 |
98041 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold10305 |
98022 |
98076 |
+ |
(TTAACTA)n |
Simple_repeat |
| scaffold10305 |
98182 |
98310 |
- |
RS135 |
Unspecified |
| scaffold10305 |
98343 |
98395 |
+ |
(AATAA)n |
Simple_repeat |