scaffold10443 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold10443 |
3 |
418 |
- |
PL947 |
Unspecified |
| scaffold10443 |
1029 |
1153 |
+ |
PL956 |
Unspecified |
| scaffold10443 |
2634 |
3734 |
- |
RS254 |
Unspecified |
| scaffold10443 |
4000 |
4028 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold10443 |
4965 |
5524 |
+ |
RS1267 |
Unspecified |
| scaffold10443 |
5589 |
5945 |
+ |
RS1267 |
Unspecified |
| scaffold10443 |
5947 |
6234 |
+ |
RS265 |
Unspecified |
| scaffold10443 |
6359 |
6837 |
+ |
RS8194 |
Unspecified |
| scaffold10443 |
8634 |
8689 |
+ |
(TTTC)n |
Simple_repeat |
| scaffold10443 |
9178 |
10070 |
+ |
RS465 |
Unspecified |
| scaffold10443 |
10500 |
10544 |
+ |
A-rich |
Low_complexity |
| scaffold10443 |
11476 |
12051 |
+ |
Caulimovirus-2_GM |
LTR/Caulimovirus |
| scaffold10443 |
11870 |
11927 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold10443 |
12623 |
12682 |
+ |
(TATTA)n |
Simple_repeat |
| scaffold10443 |
13060 |
13079 |
+ |
(A)n |
Simple_repeat |
| scaffold10443 |
13198 |
13233 |
+ |
(T)n |
Simple_repeat |
| scaffold10443 |
13518 |
13760 |
- |
RS4 |
Unspecified |
| scaffold10443 |
13773 |
13813 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold10443 |
14307 |
14352 |
+ |
(TAA)n |
Simple_repeat |
| scaffold10443 |
14860 |
14896 |
+ |
(ATT)n |
Simple_repeat |
| scaffold10443 |
15306 |
15551 |
+ |
RS4 |
Unspecified |
| scaffold10443 |
15658 |
15707 |
- |
RS4 |
Unspecified |
| scaffold10443 |
15770 |
15789 |
+ |
(A)n |
Simple_repeat |
| scaffold10443 |
16067 |
16094 |
+ |
(T)n |
Simple_repeat |
| scaffold10443 |
17600 |
17622 |
+ |
(A)n |
Simple_repeat |
| scaffold10443 |
18405 |
18440 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold10443 |
19046 |
19092 |
+ |
A-rich |
Low_complexity |
| scaffold10443 |
21709 |
22723 |
- |
RS775 |
Unspecified |
| scaffold10443 |
22599 |
22835 |
- |
RS703 |
Unspecified |
| scaffold10443 |
22833 |
23156 |
+ |
PL403 |
Unspecified |
| scaffold10443 |
24852 |
25049 |
- |
RS471 |
Unspecified |
| scaffold10443 |
25590 |
25658 |
+ |
A-rich |
Low_complexity |
| scaffold10443 |
25911 |
26678 |
- |
RS471 |
Unspecified |
| scaffold10443 |
26162 |
26758 |
+ |
RS67 |
Unspecified |
| scaffold10443 |
26236 |
26831 |
+ |
RS67 |
Unspecified |
| scaffold10443 |
26313 |
26904 |
+ |
RS67 |
Unspecified |
| scaffold10443 |
26388 |
26977 |
+ |
RS67 |
Unspecified |
| scaffold10443 |
26463 |
27050 |
+ |
RS67 |
Unspecified |
| scaffold10443 |
26537 |
27123 |
+ |
RS67 |
Unspecified |
| scaffold10443 |
26610 |
27196 |
+ |
RS67 |
Unspecified |
| scaffold10443 |
28804 |
28855 |
+ |
(T)n |
Simple_repeat |
| scaffold10443 |
29126 |
32326 |
+ |
RS227 |
Unspecified |
| scaffold10443 |
31989 |
33908 |
+ |
(TTCA)n |
Simple_repeat |
| scaffold10443 |
33874 |
33908 |
+ |
(TTCA)n |
Simple_repeat |
| scaffold10443 |
34175 |
34458 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold10443 |
34804 |
35217 |
+ |
PL910 |
Unspecified |
| scaffold10443 |
35510 |
35811 |
+ |
RS6828 |
Unspecified |
| scaffold10443 |
36044 |
36107 |
- |
Gypsy-40_STu-I |
LTR/Gypsy |
| scaffold10443 |
36261 |
37260 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold10443 |
37566 |
39406 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold10443 |
40281 |
40313 |
+ |
(AGTCAA)n |
Simple_repeat |
| scaffold10443 |
40435 |
40546 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold10443 |
41095 |
41385 |
- |
RS11094 |
Unspecified |
| scaffold10443 |
41372 |
41693 |
+ |
RS8781 |
Unspecified |
| scaffold10443 |
42399 |
43884 |
- |
RS3148 |
Unspecified |
| scaffold10443 |
44832 |
45617 |
- |
RS443 |
Unspecified |
| scaffold10443 |
45743 |
45788 |
+ |
(CGTTTT)n |
Simple_repeat |
| scaffold10443 |
46188 |
46374 |
+ |
RS2145 |
Unspecified |
| scaffold10443 |
46911 |
47174 |
- |
RS106 |
Unspecified |
| scaffold10443 |
50070 |
50126 |
+ |
(TA)n |
Simple_repeat |
| scaffold10443 |
50701 |
50722 |
+ |
(AGG)n |
Simple_repeat |
| scaffold10443 |
50946 |
51305 |
- |
RS4929 |
Unspecified |
| scaffold10443 |
51684 |
51749 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold10443 |
52263 |
52289 |
+ |
(TGA)n |
Simple_repeat |
| scaffold10443 |
52388 |
52437 |
- |
RS10621 |
Unspecified |
| scaffold10443 |
52500 |
52549 |
- |
RS10621 |
Unspecified |
| scaffold10443 |
52612 |
52828 |
- |
RS10621 |
Unspecified |
| scaffold10443 |
52905 |
53033 |
+ |
RS8864 |
Unspecified |
| scaffold10443 |
54317 |
54421 |
+ |
RS13525 |
Unspecified |
| scaffold10443 |
54651 |
55219 |
+ |
RS14306 |
Unspecified |
| scaffold10443 |
55487 |
55593 |
+ |
RS536 |
Unspecified |
| scaffold10443 |
55696 |
55756 |
+ |
A-rich |
Low_complexity |
| scaffold10443 |
55844 |
55971 |
- |
RS10164 |
Unspecified |
| scaffold10443 |
55993 |
56022 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold10443 |
56383 |
56620 |
+ |
RS606 |
Unspecified |
| scaffold10443 |
56756 |
56778 |
+ |
(A)n |
Simple_repeat |
| scaffold10443 |
57604 |
57748 |
- |
RS622 |
Unspecified |
| scaffold10443 |
58111 |
58304 |
+ |
RS606 |
Unspecified |
| scaffold10443 |
58612 |
58732 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold10443 |
58806 |
59255 |
- |
RS187 |
Unspecified |
| scaffold10443 |
59805 |
59898 |
- |
RS16382 |
Unspecified |
| scaffold10443 |
59938 |
60043 |
+ |
RS11791 |
Unspecified |
| scaffold10443 |
60577 |
60594 |
+ |
(A)n |
Simple_repeat |
| scaffold10443 |
61149 |
61212 |
+ |
(TGTTGT)n |
Simple_repeat |
| scaffold10443 |
61487 |
61573 |
- |
RS10759 |
Unspecified |
| scaffold10443 |
64680 |
64884 |
- |
RS549 |
Unspecified |
| scaffold10443 |
65200 |
65409 |
+ |
RS735 |
Unspecified |
| scaffold10443 |
65412 |
65512 |
+ |
RS893 |
Unspecified |
| scaffold10443 |
65828 |
65872 |
+ |
A-rich |
Low_complexity |
| scaffold10443 |
65943 |
66169 |
+ |
RS9337 |
Unspecified |
| scaffold10443 |
66172 |
66232 |
+ |
(TTCTTC)n |
Simple_repeat |
| scaffold10443 |
66323 |
66465 |
+ |
(ATG)n |
Simple_repeat |
| scaffold10443 |
66971 |
67576 |
- |
RS2912 |
Unspecified |