scaffold10604 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold10604 |
175 |
212 |
+ |
(CAACTCAAG)n |
Simple_repeat |
| scaffold10604 |
226 |
250 |
+ |
(AGA)n |
Simple_repeat |
| scaffold10604 |
431 |
544 |
+ |
A-rich |
Low_complexity |
| scaffold10604 |
681 |
2032 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold10604 |
2134 |
2487 |
+ |
Gypsy2-SB_I-int |
LTR/Gypsy |
| scaffold10604 |
4686 |
5063 |
+ |
(ATA)n |
Simple_repeat |
| scaffold10604 |
5025 |
5063 |
+ |
(ATA)n |
Simple_repeat |
| scaffold10604 |
5816 |
6002 |
- |
RS14409 |
Unspecified |
| scaffold10604 |
6727 |
6770 |
- |
RAM12_I-int |
LTR/Gypsy |
| scaffold10604 |
6978 |
7206 |
+ |
RS8439 |
Unspecified |
| scaffold10604 |
7092 |
7370 |
+ |
RS6099 |
Unspecified |
| scaffold10604 |
7432 |
7727 |
- |
RAM9B_LTR |
LTR/Gypsy |
| scaffold10604 |
8084 |
8221 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold10604 |
8227 |
8388 |
+ |
PL870 |
Unspecified |
| scaffold10604 |
8322 |
8441 |
+ |
RS8665 |
Unspecified |
| scaffold10604 |
8387 |
8963 |
- |
PL656 |
Unspecified |
| scaffold10604 |
8472 |
9829 |
+ |
PL554 |
Unspecified |
| scaffold10604 |
9808 |
9987 |
- |
PL182 |
Unspecified |
| scaffold10604 |
9830 |
10718 |
+ |
RS3063 |
Unspecified |
| scaffold10604 |
10704 |
11329 |
+ |
PL957 |
Unspecified |
| scaffold10604 |
10793 |
12990 |
+ |
RS564 |
Unspecified |
| scaffold10604 |
14718 |
14776 |
+ |
ENSPM2_ZM |
DNA/CMC-EnSpm |
| scaffold10604 |
14795 |
14950 |
+ |
RS6872 |
Unspecified |
| scaffold10604 |
15141 |
15283 |
+ |
RS6159 |
Unspecified |
| scaffold10604 |
15199 |
15406 |
+ |
RS7227 |
Unspecified |
| scaffold10604 |
16141 |
16180 |
+ |
(ATATTAG)n |
Simple_repeat |
| scaffold10604 |
16791 |
16832 |
- |
Copia-10_TC-I |
LTR/Copia |
| scaffold10604 |
20548 |
20730 |
- |
TPN1_IN |
DNA/CMC-EnSpm |
| scaffold10604 |
20655 |
20740 |
+ |
TPN1_IN |
DNA/CMC-EnSpm |
| scaffold10604 |
25036 |
25151 |
- |
Gypsy18-PTR_LTR |
LTR/Gypsy |
| scaffold10604 |
25349 |
25411 |
+ |
(AATCAAT)n |
Simple_repeat |
| scaffold10604 |
25547 |
25593 |
+ |
A-rich |
Low_complexity |
| scaffold10604 |
25763 |
25771 |
+ |
(TGCTTC)n |
Simple_repeat |
| scaffold10604 |
25772 |
25793 |
+ |
(TCT)n |
Simple_repeat |
| scaffold10604 |
26015 |
26101 |
- |
Gypsy-48_Mad-I |
LTR/Gypsy |
| scaffold10604 |
26668 |
26821 |
- |
Ogre-MT3_I-int |
LTR/Gypsy |
| scaffold10604 |
26872 |
26929 |
- |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold10604 |
26950 |
27379 |
- |
RS3283 |
Unspecified |
| scaffold10604 |
27453 |
27787 |
- |
RS4382 |
Unspecified |
| scaffold10604 |
27958 |
28071 |
- |
RS6070 |
Unspecified |
| scaffold10604 |
28073 |
28118 |
+ |
(GTG)n |
Simple_repeat |
| scaffold10604 |
28206 |
28228 |
+ |
(T)n |
Simple_repeat |
| scaffold10604 |
28229 |
28238 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold10604 |
28342 |
28368 |
+ |
(T)n |
Simple_repeat |
| scaffold10604 |
28456 |
28505 |
+ |
A-rich |
Low_complexity |
| scaffold10604 |
28915 |
30248 |
+ |
RS77 |
Unspecified |
| scaffold10604 |
33142 |
33261 |
+ |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold10604 |
33338 |
33472 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold10604 |
33669 |
35471 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold10604 |
35639 |
35673 |
+ |
(AACAAC)n |
Simple_repeat |
| scaffold10604 |
35716 |
37313 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold10604 |
35716 |
36966 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold10604 |
36910 |
37414 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold10604 |
37288 |
37414 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold10604 |
39820 |
40128 |
- |
RS478 |
Unspecified |
| scaffold10604 |
40052 |
40918 |
+ |
RS77 |
Unspecified |
| scaffold10604 |
41070 |
41114 |
+ |
(TCA)n |
Simple_repeat |
| scaffold10604 |
41703 |
41770 |
+ |
(AAAATAA)n |
Simple_repeat |
| scaffold10604 |
42614 |
42660 |
+ |
A-rich |
Low_complexity |
| scaffold10604 |
42841 |
42849 |
+ |
(TGCTTC)n |
Simple_repeat |
| scaffold10604 |
42850 |
42871 |
+ |
(TCT)n |
Simple_repeat |
| scaffold10604 |
42917 |
43105 |
- |
RS388 |
Unspecified |
| scaffold10604 |
43530 |
43899 |
- |
RS4182 |
Unspecified |
| scaffold10604 |
43910 |
44213 |
+ |
RS1348 |
Unspecified |
| scaffold10604 |
44962 |
45032 |
+ |
GA-rich |
Low_complexity |
| scaffold10604 |
45067 |
45640 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold10604 |
45839 |
46123 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold10604 |
46852 |
47325 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold10604 |
48512 |
50308 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold10604 |
50304 |
50395 |
- |
PL926 |
Unspecified |
| scaffold10604 |
51109 |
54489 |
+ |
Gypsy-34_VV-I |
LTR/Gypsy |
| scaffold10604 |
54578 |
54597 |
+ |
(A)n |
Simple_repeat |
| scaffold10604 |
54598 |
54682 |
+ |
Gypsy-34_VV-I |
LTR/Gypsy |
| scaffold10604 |
54738 |
54871 |
+ |
Gypsy-34_VV-I |
LTR/Gypsy |
| scaffold10604 |
54880 |
54957 |
+ |
(AAT)n |
Simple_repeat |
| scaffold10604 |
54970 |
55078 |
+ |
Gypsy-34_VV-I |
LTR/Gypsy |
| scaffold10604 |
55067 |
55232 |
+ |
Gypsy-36_Mad-I |
LTR/Gypsy |
| scaffold10604 |
55624 |
55655 |
+ |
A-rich |
Low_complexity |
| scaffold10604 |
56896 |
56973 |
+ |
A-rich |
Low_complexity |
| scaffold10604 |
58176 |
58436 |
+ |
Gypsy-34_VV-I |
LTR/Gypsy |
| scaffold10604 |
58756 |
59010 |
+ |
Gypsy-34_VV-I |
LTR/Gypsy |
| scaffold10604 |
59766 |
59801 |
+ |
(AAAAGA)n |
Simple_repeat |
| scaffold10604 |
61250 |
61280 |
+ |
A-rich |
Low_complexity |
| scaffold10604 |
61503 |
61534 |
+ |
(T)n |
Simple_repeat |
| scaffold10604 |
61688 |
61843 |
- |
RS1546 |
Unspecified |
| scaffold10604 |
61960 |
62275 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold10604 |
62920 |
63086 |
- |
RS473 |
Unspecified |
| scaffold10604 |
63088 |
63355 |
- |
PL396 |
Unspecified |
| scaffold10604 |
63566 |
63690 |
+ |
RS10762 |
Unspecified |
| scaffold10604 |
63691 |
63848 |
- |
RS1546 |
Unspecified |
| scaffold10604 |
63907 |
63992 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
| scaffold10604 |
64977 |
65037 |
- |
RS18308 |
Unspecified |
| scaffold10604 |
65031 |
65174 |
- |
RS10898 |
Unspecified |
| scaffold10604 |
65057 |
65189 |
- |
RS441 |
Unspecified |
| scaffold10604 |
65286 |
65530 |
- |
RS4 |
Unspecified |
| scaffold10604 |
65752 |
65798 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold10604 |
65809 |
65859 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold10604 |
65983 |
66013 |
+ |
(A)n |
Simple_repeat |
| scaffold10604 |
70591 |
70612 |
+ |
(GTAC)n |
Simple_repeat |
| scaffold10604 |
71893 |
71925 |
+ |
(TGTGCG)n |
Simple_repeat |
| scaffold10604 |
72243 |
72264 |
+ |
(T)n |
Simple_repeat |
| scaffold10604 |
75146 |
75191 |
+ |
(GCTCTT)n |
Simple_repeat |
| scaffold10604 |
76406 |
76431 |
+ |
(ATTAG)n |
Simple_repeat |
| scaffold10604 |
76976 |
77008 |
+ |
(TGTGCG)n |
Simple_repeat |
| scaffold10604 |
77326 |
77347 |
+ |
(T)n |
Simple_repeat |
| scaffold10604 |
80268 |
80313 |
+ |
(GCTCTT)n |
Simple_repeat |
| scaffold10604 |
81528 |
81553 |
+ |
(ATTAG)n |
Simple_repeat |
| scaffold10604 |
81969 |
82238 |
+ |
RS17600 |
Unspecified |
| scaffold10604 |
82441 |
82476 |
+ |
(ACTTTAA)n |
Simple_repeat |
| scaffold10604 |
83435 |
83508 |
+ |
RS1441 |
Unspecified |
| scaffold10604 |
83908 |
84173 |
- |
RS356 |
Unspecified |
| scaffold10604 |
84173 |
84400 |
+ |
RS376 |
Unspecified |
| scaffold10604 |
84737 |
84784 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold10604 |
86785 |
86801 |
+ |
(T)n |
Simple_repeat |
| scaffold10604 |
87693 |
87783 |
- |
RS22 |
Unspecified |
| scaffold10604 |
88225 |
88252 |
+ |
(T)n |
Simple_repeat |
| scaffold10604 |
89462 |
89514 |
+ |
(TTGAGTA)n |
Simple_repeat |
| scaffold10604 |
89646 |
89663 |
+ |
(A)n |
Simple_repeat |
| scaffold10604 |
89932 |
90043 |
+ |
RS172 |
Unspecified |
| scaffold10604 |
90287 |
90661 |
- |
RS4921 |
Unspecified |
| scaffold10604 |
90490 |
90931 |
- |
RS1534 |
Unspecified |
| scaffold10604 |
91295 |
91336 |
+ |
(T)n |
Simple_repeat |
| scaffold10604 |
92007 |
92151 |
+ |
RS3300 |
Unspecified |
| scaffold10604 |
92164 |
92271 |
+ |
(CAT)n |
Simple_repeat |
| scaffold10604 |
92272 |
92308 |
+ |
(CCGGTG)n |
Simple_repeat |
| scaffold10604 |
93947 |
93981 |
+ |
(TTCCTT)n |
Simple_repeat |
| scaffold10604 |
96190 |
96371 |
+ |
RS8 |
Unspecified |
| scaffold10604 |
96374 |
96446 |
+ |
RS8 |
Unspecified |
| scaffold10604 |
96704 |
96764 |
+ |
(AAC)n |
Simple_repeat |
| scaffold10604 |
97862 |
97896 |
+ |
(T)n |
Simple_repeat |
| scaffold10604 |
99677 |
99790 |
+ |
RS10662 |
Unspecified |
| scaffold10604 |
99855 |
99911 |
+ |
Mariner-4_SBi |
DNA/TcMar-Stowaway |
| scaffold10604 |
100094 |
100195 |
+ |
RS13452 |
Unspecified |
| scaffold10604 |
100254 |
100505 |
+ |
RS11887 |
Unspecified |
| scaffold10604 |
100509 |
100666 |
+ |
RS12861 |
Unspecified |
| scaffold10604 |
100779 |
100859 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold10604 |
101191 |
101315 |
+ |
RS12530 |
Unspecified |
| scaffold10604 |
101663 |
101791 |
+ |
RS12843 |
Unspecified |
| scaffold10604 |
101871 |
101994 |
+ |
RS9470 |
Unspecified |
| scaffold10604 |
102536 |
102717 |
+ |
RS13587 |
Unspecified |
| scaffold10604 |
103516 |
103609 |
- |
RS18358 |
Unspecified |
| scaffold10604 |
103752 |
103934 |
+ |
RS11984 |
Unspecified |
| scaffold10604 |
104144 |
104161 |
+ |
(T)n |
Simple_repeat |
| scaffold10604 |
104892 |
104990 |
- |
RS1793 |
Unspecified |
| scaffold10604 |
105083 |
105362 |
- |
RS7727 |
Unspecified |