scaffold111 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold111 |
517 |
663 |
+ |
(TTATGTT)n |
Simple_repeat |
| scaffold111 |
533 |
663 |
+ |
(TTATGTT)n |
Simple_repeat |
| scaffold111 |
583 |
663 |
+ |
(TTATGTT)n |
Simple_repeat |
| scaffold111 |
2169 |
2634 |
+ |
RS344 |
Unspecified |
| scaffold111 |
2633 |
2702 |
- |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold111 |
2833 |
3960 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold111 |
4176 |
4976 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold111 |
5036 |
5186 |
- |
RS934 |
Unspecified |
| scaffold111 |
5194 |
6620 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold111 |
5194 |
6207 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold111 |
6005 |
6620 |
- |
RS5888 |
Unspecified |
| scaffold111 |
6749 |
6851 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold111 |
7869 |
7911 |
- |
Gypsy-20_SMo-I |
LTR/Gypsy |
| scaffold111 |
13111 |
14317 |
- |
PL933 |
Unspecified |
| scaffold111 |
14299 |
15298 |
- |
RS11 |
Unspecified |
| scaffold111 |
14408 |
15311 |
+ |
PL559 |
Unspecified |
| scaffold111 |
15495 |
15522 |
+ |
(AAGGA)n |
Simple_repeat |
| scaffold111 |
15606 |
15697 |
- |
Gypsy-23_ST-LTR |
LTR/Gypsy |
| scaffold111 |
15772 |
15872 |
+ |
Gypsy-29_PTr-LTR |
LTR/Gypsy |
| scaffold111 |
17057 |
17099 |
+ |
(TTTCGGT)n |
Simple_repeat |
| scaffold111 |
17494 |
18989 |
+ |
RS51 |
Unspecified |
| scaffold111 |
18753 |
19030 |
+ |
PL383 |
Unspecified |
| scaffold111 |
20442 |
20492 |
+ |
(AACAAAC)n |
Simple_repeat |
| scaffold111 |
20493 |
20559 |
+ |
A-rich |
Low_complexity |
| scaffold111 |
20620 |
21051 |
+ |
Gypsy-133_GM-I |
LTR/Gypsy |
| scaffold111 |
21022 |
21702 |
+ |
RS369 |
Unspecified |
| scaffold111 |
21793 |
22635 |
- |
RS66 |
Unspecified |
| scaffold111 |
22631 |
22759 |
+ |
RS66 |
Unspecified |
| scaffold111 |
22961 |
23021 |
+ |
Copia26-PTR_I-int |
LTR/Copia |
| scaffold111 |
23396 |
23448 |
+ |
(GCTTAG)n |
Simple_repeat |
| scaffold111 |
23616 |
24369 |
+ |
RS66 |
Unspecified |
| scaffold111 |
25425 |
25466 |
+ |
A-rich |
Low_complexity |
| scaffold111 |
26153 |
26263 |
+ |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold111 |
27101 |
27234 |
+ |
A-rich |
Low_complexity |
| scaffold111 |
28160 |
28211 |
+ |
(GT)n |
Simple_repeat |
| scaffold111 |
29061 |
30169 |
- |
RS1149 |
Unspecified |
| scaffold111 |
32981 |
33175 |
- |
RS348 |
Unspecified |
| scaffold111 |
33399 |
33422 |
+ |
(TGT)n |
Simple_repeat |
| scaffold111 |
33443 |
33780 |
+ |
(TGCTTG)n |
Simple_repeat |
| scaffold111 |
33443 |
33513 |
+ |
(TGCTTG)n |
Simple_repeat |
| scaffold111 |
33498 |
33780 |
+ |
RS5241 |
Unspecified |
| scaffold111 |
33892 |
33972 |
+ |
RS413 |
Unspecified |
| scaffold111 |
34043 |
34277 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold111 |
34309 |
34589 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold111 |
34594 |
35049 |
+ |
RS413 |
Unspecified |
| scaffold111 |
35234 |
35994 |
- |
RS706 |
Unspecified |
| scaffold111 |
35879 |
36687 |
+ |
RS166 |
Unspecified |
| scaffold111 |
36289 |
36908 |
+ |
RS1381 |
Unspecified |
| scaffold111 |
36681 |
37277 |
+ |
RS903 |
Unspecified |
| scaffold111 |
38286 |
38335 |
+ |
(TGT)n |
Simple_repeat |
| scaffold111 |
40410 |
40518 |
+ |
RS676 |
Unspecified |
| scaffold111 |
41488 |
41598 |
- |
OSLINE1-4 |
LINE/L1 |
| scaffold111 |
41861 |
42121 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold111 |
42132 |
42887 |
+ |
RS676 |
Unspecified |
| scaffold111 |
43066 |
43356 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold111 |
43619 |
43700 |
+ |
(GCTTTT)n |
Simple_repeat |
| scaffold111 |
43706 |
43732 |
+ |
(T)n |
Simple_repeat |
| scaffold111 |
44527 |
44580 |
- |
Copia-37_BD-I |
LTR/Copia |
| scaffold111 |
44870 |
44902 |
+ |
(TAT)n |
Simple_repeat |
| scaffold111 |
45092 |
45117 |
+ |
(ATATC)n |
Simple_repeat |
| scaffold111 |
45419 |
46070 |
+ |
RS1123 |
Unspecified |
| scaffold111 |
46981 |
47006 |
+ |
(T)n |
Simple_repeat |
| scaffold111 |
47374 |
47662 |
- |
RS1149 |
Unspecified |
| scaffold111 |
47659 |
48294 |
+ |
RS66 |
Unspecified |
| scaffold111 |
48297 |
48417 |
- |
PL562 |
Unspecified |
| scaffold111 |
52204 |
52248 |
+ |
(T)n |
Simple_repeat |
| scaffold111 |
52419 |
52538 |
+ |
(CAT)n |
Simple_repeat |
| scaffold111 |
52876 |
53732 |
+ |
RS66 |
Unspecified |
| scaffold111 |
54237 |
55648 |
- |
RS1496 |
Unspecified |
| scaffold111 |
55954 |
55982 |
+ |
(TG)n |
Simple_repeat |
| scaffold111 |
56841 |
57069 |
+ |
Gypsy-29_VV-I |
LTR/Gypsy |
| scaffold111 |
57071 |
57405 |
- |
RS1036 |
Unspecified |
| scaffold111 |
57936 |
57968 |
+ |
(AAT)n |
Simple_repeat |
| scaffold111 |
58285 |
58886 |
+ |
RS1727 |
Unspecified |
| scaffold111 |
58880 |
58936 |
+ |
RS8491 |
Unspecified |
| scaffold111 |
59086 |
59118 |
+ |
(TAT)n |
Simple_repeat |
| scaffold111 |
62126 |
62172 |
+ |
(CTTGTTGT)n |
Simple_repeat |
| scaffold111 |
62289 |
62928 |
- |
RS121 |
Unspecified |
| scaffold111 |
62550 |
63234 |
- |
RS2911 |
Unspecified |
| scaffold111 |
64178 |
64402 |
+ |
RS4398 |
Unspecified |
| scaffold111 |
64285 |
64634 |
- |
RS1740 |
Unspecified |
| scaffold111 |
66231 |
66262 |
+ |
(TGTTT)n |
Simple_repeat |
| scaffold111 |
67248 |
67534 |
+ |
RS709 |
Unspecified |
| scaffold111 |
67482 |
67681 |
+ |
RS6749 |
Unspecified |
| scaffold111 |
67801 |
68076 |
- |
RS3035 |
Unspecified |
| scaffold111 |
68760 |
68830 |
+ |
(TT)n |
Simple_repeat |
| scaffold111 |
69796 |
70402 |
+ |
RS4224 |
Unspecified |
| scaffold111 |
70430 |
70887 |
- |
RS4960 |
Unspecified |
| scaffold111 |
70600 |
70925 |
+ |
RS911 |
Unspecified |
| scaffold111 |
70977 |
71996 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold111 |
72360 |
74131 |
- |
OGRE-I_PS |
LTR/Gypsy |
| scaffold111 |
74469 |
75182 |
+ |
RS5742 |
Unspecified |
| scaffold111 |
75233 |
75359 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold111 |
75997 |
76186 |
+ |
RS3822 |
Unspecified |
| scaffold111 |
76022 |
76226 |
+ |
RS6628 |
Unspecified |
| scaffold111 |
77544 |
77567 |
+ |
(GGT)n |
Simple_repeat |
| scaffold111 |
80150 |
80196 |
+ |
(CTTGTTGT)n |
Simple_repeat |
| scaffold111 |
80751 |
80843 |
+ |
RS8491 |
Unspecified |
| scaffold111 |
80851 |
81397 |
+ |
OGRE-I_PS |
LTR/Gypsy |
| scaffold111 |
81692 |
81725 |
+ |
(ATCAT)n |
Simple_repeat |
| scaffold111 |
82621 |
82703 |
+ |
RS2155 |
Unspecified |
| scaffold111 |
83299 |
83365 |
+ |
A-rich |
Low_complexity |
| scaffold111 |
87386 |
87433 |
+ |
(GCTTAGT)n |
Simple_repeat |
| scaffold111 |
88379 |
88420 |
+ |
(TTTAGAT)n |
Simple_repeat |
| scaffold111 |
89949 |
90568 |
+ |
Gyp_I_MT-int |
LTR/Gypsy |
| scaffold111 |
90632 |
90872 |
+ |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold111 |
91237 |
91800 |
+ |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold111 |
91811 |
92304 |
+ |
RS5503 |
Unspecified |
| scaffold111 |
92307 |
93515 |
- |
RS836 |
Unspecified |
| scaffold111 |
93511 |
93923 |
- |
RS1023 |
Unspecified |
| scaffold111 |
94432 |
94489 |
+ |
(AACATAA)n |
Simple_repeat |
| scaffold111 |
94984 |
96395 |
- |
RAM9B_I-int |
LTR/Gypsy |
| scaffold111 |
95076 |
96395 |
- |
RAM9B_I-int |
LTR/Gypsy |
| scaffold111 |
96808 |
99330 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold111 |
96844 |
98181 |
- |
RAM9B_I-int |
LTR/Gypsy |
| scaffold111 |
98393 |
98495 |
- |
RIRE8B_I-int |
LTR/Gypsy |
| scaffold111 |
98590 |
98699 |
- |
RIRE8B_I-int |
LTR/Gypsy |
| scaffold111 |
100022 |
100793 |
+ |
(AACAC)n |
Simple_repeat |
| scaffold111 |
100022 |
100116 |
+ |
(AACAC)n |
Simple_repeat |
| scaffold111 |
100072 |
100793 |
+ |
RS211 |
Unspecified |
| scaffold111 |
101170 |
101266 |
+ |
(ACA)n |
Simple_repeat |
| scaffold111 |
101326 |
101651 |
+ |
RS2566 |
Unspecified |
| scaffold111 |
102754 |
102843 |
+ |
(TACA)n |
Simple_repeat |
| scaffold111 |
103402 |
103425 |
+ |
(A)n |
Simple_repeat |
| scaffold111 |
103753 |
103789 |
+ |
A-rich |
Low_complexity |
| scaffold111 |
104185 |
104409 |
+ |
RS2214 |
Unspecified |
| scaffold111 |
104691 |
104810 |
- |
RS183 |
Unspecified |
| scaffold111 |
104807 |
105016 |
- |
RS183 |
Unspecified |
| scaffold111 |
105197 |
105254 |
+ |
(AACATAA)n |
Simple_repeat |
| scaffold111 |
105888 |
106380 |
+ |
Gypsy-26_VV-I |
LTR/Gypsy |
| scaffold111 |
108413 |
109234 |
+ |
RS1000 |
Unspecified |
| scaffold111 |
109447 |
109496 |
+ |
RS644 |
Unspecified |
| scaffold111 |
109673 |
109732 |
+ |
(TAAGAC)n |
Simple_repeat |
| scaffold111 |
110409 |
110598 |
+ |
RS1729 |
Unspecified |
| scaffold111 |
110883 |
111014 |
- |
RS783 |
Unspecified |
| scaffold111 |
111029 |
112048 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold111 |
111075 |
111134 |
+ |
Gypsy-2_Mad-I |
LTR/Gypsy |
| scaffold111 |
111582 |
111631 |
+ |
(CTG)n |
Simple_repeat |
| scaffold111 |
111666 |
111735 |
+ |
RIRE8B_I-int |
LTR/Gypsy |
| scaffold111 |
111852 |
111951 |
+ |
Gypsy-2_Mad-I |
LTR/Gypsy |
| scaffold111 |
112058 |
112225 |
- |
PL318 |
Unspecified |
| scaffold111 |
301890 |
302790 |
+ |
PL595 |
Unspecified |