scaffold11187 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold11187 |
1 |
772 |
+ |
(TTCACTA)n |
Simple_repeat |
| scaffold11187 |
692 |
772 |
+ |
(TTCACTA)n |
Simple_repeat |
| scaffold11187 |
780 |
933 |
+ |
(TTATAC)n |
Simple_repeat |
| scaffold11187 |
1097 |
1747 |
+ |
RS1154 |
Unspecified |
| scaffold11187 |
1822 |
1894 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold11187 |
2194 |
2238 |
+ |
A-rich |
Low_complexity |
| scaffold11187 |
2271 |
2332 |
+ |
(TAT)n |
Simple_repeat |
| scaffold11187 |
2331 |
2362 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold11187 |
2459 |
3047 |
- |
RS69 |
Unspecified |
| scaffold11187 |
3069 |
3120 |
+ |
(TAGTAT)n |
Simple_repeat |
| scaffold11187 |
3519 |
3754 |
+ |
RS514 |
Unspecified |
| scaffold11187 |
4094 |
4615 |
- |
PL190 |
Unspecified |
| scaffold11187 |
4612 |
5289 |
+ |
RS869 |
Unspecified |
| scaffold11187 |
5273 |
5692 |
- |
PL124 |
Unspecified |
| scaffold11187 |
6747 |
7833 |
+ |
RS51 |
Unspecified |
| scaffold11187 |
7094 |
8058 |
- |
RS2700 |
Unspecified |
| scaffold11187 |
7448 |
7890 |
- |
Gypsy-26_VV-I |
LTR/Gypsy |
| scaffold11187 |
7617 |
8165 |
+ |
RS21 |
Unspecified |
| scaffold11187 |
9545 |
9622 |
+ |
A-rich |
Low_complexity |
| scaffold11187 |
9643 |
10958 |
+ |
RS730 |
Unspecified |
| scaffold11187 |
11029 |
11078 |
+ |
A-rich |
Low_complexity |
| scaffold11187 |
11627 |
12327 |
- |
RS838 |
Unspecified |
| scaffold11187 |
12605 |
12675 |
+ |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold11187 |
13574 |
14834 |
+ |
(CAGCAT)n |
Simple_repeat |
| scaffold11187 |
14722 |
14834 |
+ |
(CAGCAT)n |
Simple_repeat |
| scaffold11187 |
16583 |
16883 |
- |
PL175 |
Unspecified |
| scaffold11187 |
16883 |
17165 |
+ |
RS869 |
Unspecified |
| scaffold11187 |
17162 |
18683 |
+ |
RS869 |
Unspecified |
| scaffold11187 |
17340 |
18921 |
+ |
RS412 |
Unspecified |
| scaffold11187 |
19006 |
19253 |
- |
RS357 |
Unspecified |
| scaffold11187 |
19599 |
19639 |
+ |
A-rich |
Low_complexity |
| scaffold11187 |
19646 |
19672 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold11187 |
23711 |
23735 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold11187 |
23743 |
23788 |
+ |
A-rich |
Low_complexity |
| scaffold11187 |
23957 |
24141 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold11187 |
24547 |
24584 |
+ |
(TTCAT)n |
Simple_repeat |
| scaffold11187 |
25567 |
25605 |
+ |
(AAGATAA)n |
Simple_repeat |
| scaffold11187 |
25758 |
26322 |
+ |
PL469 |
Unspecified |
| scaffold11187 |
26524 |
26546 |
+ |
(A)n |
Simple_repeat |
| scaffold11187 |
27043 |
27584 |
+ |
RS405 |
Unspecified |
| scaffold11187 |
28633 |
28739 |
+ |
(T)n |
Simple_repeat |
| scaffold11187 |
28882 |
28902 |
+ |
(A)n |
Simple_repeat |
| scaffold11187 |
29010 |
29050 |
+ |
(TCTTTC)n |
Simple_repeat |
| scaffold11187 |
29074 |
29670 |
+ |
RS211 |
Unspecified |
| scaffold11187 |
29892 |
29922 |
+ |
(TAT)n |
Simple_repeat |
| scaffold11187 |
29923 |
29993 |
+ |
(TATCTA)n |
Simple_repeat |
| scaffold11187 |
30481 |
30524 |
+ |
(AATT)n |
Simple_repeat |
| scaffold11187 |
30924 |
30953 |
+ |
(AATTAT)n |
Simple_repeat |
| scaffold11187 |
31245 |
31668 |
+ |
PL580 |
Unspecified |
| scaffold11187 |
31669 |
31685 |
+ |
(T)n |
Simple_repeat |
| scaffold11187 |
32910 |
32960 |
+ |
A-rich |
Low_complexity |
| scaffold11187 |
33660 |
34652 |
- |
RS1198 |
Unspecified |
| scaffold11187 |
34920 |
34974 |
+ |
(TTATATTA)n |
Simple_repeat |
| scaffold11187 |
35085 |
35143 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold11187 |
35474 |
35502 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold11187 |
35862 |
36020 |
- |
PL13 |
Unspecified |
| scaffold11187 |
39397 |
40955 |
+ |
RS51 |
Unspecified |
| scaffold11187 |
40953 |
41705 |
- |
RS2700 |
Unspecified |
| scaffold11187 |
41688 |
42209 |
+ |
PL770 |
Unspecified |
| scaffold11187 |
41930 |
42910 |
+ |
RS801 |
Unspecified |
| scaffold11187 |
42909 |
43108 |
+ |
PL150 |
Unspecified |
| scaffold11187 |
44009 |
44169 |
- |
RS1210 |
Unspecified |
| scaffold11187 |
45193 |
45230 |
+ |
(AACAAA)n |
Simple_repeat |
| scaffold11187 |
46507 |
47510 |
+ |
RS44 |
Unspecified |
| scaffold11187 |
47432 |
48410 |
+ |
RS878 |
Unspecified |
| scaffold11187 |
49328 |
50087 |
+ |
RS3423 |
Unspecified |
| scaffold11187 |
50228 |
50343 |
- |
MIDWAY |
DNA/hAT-Tip100 |
| scaffold11187 |
50249 |
50487 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold11187 |
50478 |
51397 |
+ |
RS51 |
Unspecified |
| scaffold11187 |
52612 |
52773 |
- |
RS311 |
Unspecified |
| scaffold11187 |
60587 |
60615 |
+ |
(T)n |
Simple_repeat |
| scaffold11187 |
61439 |
61463 |
+ |
(A)n |
Simple_repeat |
| scaffold11187 |
62055 |
62106 |
+ |
GA-rich |
Low_complexity |
| scaffold11187 |
62241 |
62269 |
+ |
(CTCTCA)n |
Simple_repeat |
| scaffold11187 |
62501 |
62546 |
+ |
(CTCTTC)n |
Simple_repeat |
| scaffold11187 |
64436 |
64497 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold11187 |
64838 |
64886 |
+ |
(TAACA)n |
Simple_repeat |
| scaffold11187 |
65373 |
65400 |
+ |
A-rich |
Low_complexity |
| scaffold11187 |
65776 |
65813 |
+ |
A-rich |
Low_complexity |
| scaffold11187 |
66470 |
66791 |
- |
RS319 |
Unspecified |
| scaffold11187 |
67035 |
67120 |
- |
RS319 |
Unspecified |
| scaffold11187 |
67182 |
67206 |
+ |
(CTCA)n |
Simple_repeat |
| scaffold11187 |
67553 |
67582 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold11187 |
68392 |
68432 |
+ |
(T)n |
Simple_repeat |
| scaffold11187 |
68919 |
68927 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold11187 |
68928 |
68963 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold11187 |
68965 |
68982 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold11187 |
69696 |
70523 |
- |
RS814 |
Unspecified |
| scaffold11187 |
70524 |
72185 |
- |
PL124 |
Unspecified |
| scaffold11187 |
72187 |
73206 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold11187 |
72187 |
72875 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold11187 |
72589 |
73206 |
- |
RS5888 |
Unspecified |
| scaffold11187 |
73309 |
73444 |
- |
Gypsy13-PTR_I-int |
LTR/Gypsy |
| scaffold11187 |
74229 |
74294 |
- |
Gypsy-21_ST-I |
LTR/Gypsy |