| genome | start | end | strand | repeat-name | repeat-class |
|---|---|---|---|---|---|
| scaffold11544 | 81 | 183 | - | TPN1_IN | DNA/CMC-EnSpm |
| scaffold11544 | 81 | 1017 | - | TPN1_IN | DNA/CMC-EnSpm |
| scaffold11544 | 148 | 1017 | + | RS1106 | Unspecified |
| scaffold11544 | 1019 | 1247 | + | RS1106 | Unspecified |
| scaffold11544 | 1297 | 1386 | + | (AGTTTGT)n | Simple_repeat |
| scaffold11544 | 1596 | 1665 | - | TPN1_IN | DNA/CMC-EnSpm |
| scaffold11544 | 1783 | 1931 | - | EnSpm-1_GM | DNA/CMC-EnSpm |
| scaffold11544 | 2494 | 2620 | + | (TTG)n | Simple_repeat |
| scaffold11544 | 3277 | 3339 | + | (ATTT)n | Simple_repeat |
| scaffold11544 | 3585 | 4055 | + | RS2236 | Unspecified |
| scaffold11544 | 4104 | 4133 | + | (AT)n | Simple_repeat |
| scaffold11544 | 4131 | 4642 | + | RS1898 | Unspecified |
| scaffold11544 | 4686 | 5067 | + | RS2295 | Unspecified |
| scaffold11544 | 5074 | 5144 | + | (ATTTAT)n | Simple_repeat |
| scaffold11544 | 5145 | 5163 | + | (TA)n | Simple_repeat |
| scaffold11544 | 5228 | 6004 | + | (TGAACC)n | Simple_repeat |
| scaffold11544 | 5228 | 5359 | + | (TGAACC)n | Simple_repeat |
| scaffold11544 | 5312 | 6004 | + | RS2245 | Unspecified |
| scaffold11544 | 6369 | 6408 | + | (TG)n | Simple_repeat |
| scaffold11544 | 7450 | 7491 | + | RS15106 | Unspecified |
| scaffold11544 | 7694 | 7928 | + | TPN1_IN | DNA/CMC-EnSpm |
| scaffold11544 | 8404 | 8430 | + | (A)n | Simple_repeat |
| scaffold11544 | 8404 | 8883 | + | (A)n | Simple_repeat |
| scaffold11544 | 8418 | 8883 | - | RS666 | Unspecified |
| scaffold11544 | 8914 | 9023 | - | RS8791 | Unspecified |
| scaffold11544 | 9083 | 9309 | - | RS10178 | Unspecified |
| scaffold11544 | 9442 | 9510 | + | RS5982 | Unspecified |
| scaffold11544 | 9680 | 9790 | - | RS4392 | Unspecified |
| scaffold11544 | 9928 | 10028 | + | RS8646 | Unspecified |
| scaffold11544 | 10053 | 10127 | - | PL169 | Unspecified |
| scaffold11544 | 10125 | 10172 | + | PL296 | Unspecified |
| scaffold11544 | 10210 | 10654 | - | PL169 | Unspecified |
| scaffold11544 | 10760 | 11354 | + | PL296 | Unspecified |
| scaffold11544 | 11411 | 11441 | + | (ATTAA)n | Simple_repeat |
| scaffold11544 | 11848 | 11923 | + | (TTTGA)n | Simple_repeat |
| scaffold11544 | 12705 | 12761 | + | A-rich | Low_complexity |
| scaffold11544 | 12929 | 12959 | - | RS12492 | Unspecified |
| scaffold11544 | 13300 | 13374 | + | RS10881 | Unspecified |
| scaffold11544 | 13363 | 13427 | - | RS10881 | Unspecified |
| scaffold11544 | 14221 | 14257 | - | RS4279 | Unspecified |
| scaffold11544 | 14491 | 14548 | + | RS2157 | Unspecified |
| scaffold11544 | 14497 | 14615 | - | RS1854 | Unspecified |
| scaffold11544 | 14636 | 14900 | + | RS106 | Unspecified |
| scaffold11544 | 15464 | 15668 | - | RS3598 | Unspecified |
| scaffold11544 | 15953 | 16060 | - | RS3646 | Unspecified |
| scaffold11544 | 16169 | 16201 | + | (A)n | Simple_repeat |
| scaffold11544 | 16480 | 16507 | + | (CTT)n | Simple_repeat |
| scaffold11544 | 16806 | 16836 | + | (A)n | Simple_repeat |
| scaffold11544 | 19897 | 19932 | + | (AACCC)n | Simple_repeat |
| scaffold11544 | 20123 | 20284 | + | (CCCGA)n | Simple_repeat |
| scaffold11544 | 20472 | 20612 | - | RS6156 | Unspecified |
| scaffold11544 | 20613 | 20776 | - | RS7464 | Unspecified |
| scaffold11544 | 20798 | 21199 | - | RS4921 | Unspecified |
| scaffold11544 | 21028 | 21233 | - | RS1534 | Unspecified |
| scaffold11544 | 21437 | 21585 | - | RS1534 | Unspecified |
| scaffold11544 | 21700 | 21867 | - | RS9634 | Unspecified |
| scaffold11544 | 21767 | 22086 | - | RS8329 | Unspecified |
| scaffold11544 | 22145 | 22396 | - | RS10406 | Unspecified |
| scaffold11544 | 22321 | 22513 | - | RS6341 | Unspecified |
| scaffold11544 | 22515 | 22637 | - | RS9021 | Unspecified |
| scaffold11544 | 23084 | 23111 | + | (T)n | Simple_repeat |
| scaffold11544 | 26749 | 26844 | - | RS4279 | Unspecified |
| scaffold11544 | 26857 | 26928 | - | RS4279 | Unspecified |
| scaffold11544 | 26891 | 27240 | + | RS12521 | Unspecified |
| scaffold11544 | 27270 | 27479 | - | RS10 | Unspecified |
| scaffold11544 | 27478 | 27604 | + | RS10909 | Unspecified |
| scaffold11544 | 27733 | 27808 | - | RS534 | Unspecified |
| scaffold11544 | 28059 | 28096 | + | (TTTTA)n | Simple_repeat |
| scaffold11544 | 28225 | 28738 | + | RS11090 | Unspecified |
| scaffold11544 | 28752 | 28826 | + | RS1078 | Unspecified |
| scaffold11544 | 29019 | 29036 | + | (T)n | Simple_repeat |
| scaffold11544 | 29019 | 30253 | + | (T)n | Simple_repeat |
| scaffold11544 | 29029 | 30253 | + | RS630 | Unspecified |
| scaffold11544 | 29748 | 30485 | - | RS534 | Unspecified |
| scaffold11544 | 30484 | 30603 | - | RS17860 | Unspecified |
| scaffold11544 | 30816 | 30891 | - | PL105 | Unspecified |
| scaffold11544 | 31054 | 31133 | + | Copia-2_SL-LTR | LTR/Copia |
| scaffold11544 | 31177 | 31857 | + | Copia-2_SL-I | LTR/Copia |
| scaffold11544 | 31918 | 32468 | + | Copia-2_SL-I | LTR/Copia |
| scaffold11544 | 32707 | 33051 | + | Copia-2_SL-I | LTR/Copia |
| scaffold11544 | 33298 | 33352 | + | (ATATA)n | Simple_repeat |
| scaffold11544 | 33417 | 33517 | + | RS6538 | Unspecified |
| scaffold11544 | 33610 | 33782 | + | RS3763 | Unspecified |
| scaffold11544 | 37757 | 37778 | + | (A)n | Simple_repeat |
| scaffold11544 | 39141 | 39188 | + | RS15012 | Unspecified |
| scaffold11544 | 39187 | 39474 | + | RS365 | Unspecified |
| scaffold11544 | 39473 | 39709 | + | RS15012 | Unspecified |
| scaffold11544 | 39716 | 39879 | + | RS17385 | Unspecified |
| scaffold11544 | 39886 | 40219 | + | A-rich | Low_complexity |
| scaffold11544 | 39886 | 39925 | + | A-rich | Low_complexity |
| scaffold11544 | 39917 | 40219 | + | RS15069 | Unspecified |
| scaffold11544 | 40218 | 40456 | + | RS14906 | Unspecified |
| scaffold11544 | 40221 | 40402 | + | RS1109 | Unspecified |
| scaffold11544 | 40609 | 40846 | + | RS4 | Unspecified |
| scaffold11544 | 40994 | 41035 | + | (TTGTCCAATT)n | Simple_repeat |
| scaffold11544 | 41047 | 41063 | + | (ATT)n | Simple_repeat |
| scaffold11544 | 44429 | 44468 | - | RS4279 | Unspecified |
| scaffold11544 | 44770 | 45068 | + | Copia-3_PTri-I | LTR/Copia |
| scaffold11544 | 44843 | 45068 | + | Copia-3_PTri-I | LTR/Copia |
| scaffold11544 | 45254 | 45280 | + | A-rich | Low_complexity |
| scaffold11544 | 45877 | 46038 | - | RS7574 | Unspecified |
| scaffold11544 | 46761 | 46805 | + | A-rich | Low_complexity |
| scaffold11544 | 46975 | 47021 | + | (ATCATT)n | Simple_repeat |
| scaffold11544 | 47294 | 47334 | + | RS3880 | Unspecified |
| scaffold11544 | 47334 | 47578 | + | RS3880 | Unspecified |
| scaffold11544 | 47394 | 47677 | + | RS6724 | Unspecified |
| scaffold11544 | 47430 | 47963 | + | RS6826 | Unspecified |
| scaffold11544 | 47999 | 48286 | + | RS8047 | Unspecified |
| scaffold11544 | 48429 | 48521 | - | ATRAN | DNA? |
| scaffold11544 | 48984 | 49164 | + | RS3079 | Unspecified |
| scaffold11544 | 49303 | 49324 | + | (AT)n | Simple_repeat |
| scaffold11544 | 49392 | 50954 | - | Copia-96_GM-I | LTR/Copia |
| scaffold11544 | 51686 | 51805 | - | RS4314 | Unspecified |
| scaffold11544 | 52006 | 52227 | + | RS3079 | Unspecified |
| scaffold11544 | 52214 | 52287 | + | RS6050 | Unspecified |
| scaffold11544 | 52302 | 52325 | + | (A)n | Simple_repeat |
| scaffold11544 | 53045 | 53100 | + | RS8099 | Unspecified |
| scaffold11544 | 55761 | 55859 | - | RS4279 | Unspecified |
| scaffold11544 | 56445 | 56667 | - | RS18269 | Unspecified |
| scaffold11544 | 57605 | 57646 | + | (AT)n | Simple_repeat |
| scaffold11544 | 58349 | 58394 | + | A-rich | Low_complexity |
| scaffold11544 | 59739 | 63056 | - | helitronORF | helitronORF(TransposonPSI) |
| scaffold11544 | 59746 | 61049 | - | HELITRON4_OS | RC/Helitron |
| scaffold11544 | 61331 | 63006 | - | HELITRON4_OS | RC/Helitron |
| scaffold11544 | 63196 | 63969 | - | helitronORF | helitronORF(TransposonPSI) |
| scaffold11544 | 63227 | 63440 | - | Helitron1_VV | RC/Helitron |
| scaffold11544 | 65163 | 65200 | + | (A)n | Simple_repeat |
| scaffold11544 | 65201 | 65285 | + | A-rich | Low_complexity |
| scaffold11544 | 66182 | 66198 | + | (A)n | Simple_repeat |
| scaffold11544 | 66289 | 66551 | - | RS10 | Unspecified |
| scaffold11544 | 66580 | 66689 | - | RS28 | Unspecified |
| scaffold11544 | 68264 | 68305 | + | A-rich | Low_complexity |
| scaffold11544 | 68911 | 68981 | + | (CAA)n | Simple_repeat |
| scaffold11544 | 69538 | 69571 | + | (TG)n | Simple_repeat |
| scaffold11544 | 69664 | 69700 | + | (GTTTA)n | Simple_repeat |
| scaffold11544 | 69747 | 69766 | + | (TAT)n | Simple_repeat |
| scaffold11544 | 70329 | 70373 | + | (CTA)n | Simple_repeat |
| scaffold11544 | 70409 | 70713 | + | RS9834 | Unspecified |
| scaffold11544 | 70736 | 70984 | + | RS6048 | Unspecified |
| scaffold11544 | 71829 | 71848 | + | (T)n | Simple_repeat |
| scaffold11544 | 72223 | 73489 | + | RS808 | Unspecified |
| scaffold11544 | 73005 | 73549 | + | RS11634 | Unspecified |
| scaffold11544 | 73633 | 73728 | + | (AAC)n | Simple_repeat |
| scaffold11544 | 73787 | 73877 | + | (ACA)n | Simple_repeat |
| scaffold11544 | 74562 | 74595 | + | (TG)n | Simple_repeat |
| scaffold11544 | 74688 | 74724 | + | (GTTTA)n | Simple_repeat |
| scaffold11544 | 74771 | 74790 | + | (TAT)n | Simple_repeat |
| scaffold11544 | 74860 | 76062 | - | RS49 | Unspecified |
| scaffold11544 | 76063 | 76383 | - | RS546 | Unspecified |
| scaffold11544 | 76401 | 76426 | + | (ACCCG)n | Simple_repeat |
| scaffold11544 | 76512 | 76573 | - | RS4024 | Unspecified |
| scaffold11544 | 76578 | 76670 | - | RS4024 | Unspecified |
| scaffold11544 | 76977 | 77017 | + | (AATAA)n | Simple_repeat |
| scaffold11544 | 77117 | 77139 | + | (T)n | Simple_repeat |
| scaffold11544 | 77545 | 77631 | + | (ATTATA)n | Simple_repeat |
| scaffold11544 | 77643 | 77776 | + | RS637 | Unspecified |
| scaffold11544 | 78100 | 78168 | + | (ATTTA)n | Simple_repeat |
| scaffold11544 | 78305 | 78473 | - | RS17860 | Unspecified |
| scaffold11544 | 78831 | 78922 | + | (TAATTA)n | Simple_repeat |
| scaffold11544 | 79067 | 79104 | + | (AATTAAC)n | Simple_repeat |
| scaffold11544 | 79335 | 79416 | - | RS534 | Unspecified |
| scaffold11544 | 79654 | 79691 | + | (TTTTA)n | Simple_repeat |
| scaffold11544 | 80694 | 80723 | + | (CGA)n | Simple_repeat |
| scaffold11544 | 80748 | 80814 | + | (CCA)n | Simple_repeat |
| scaffold11544 | 80825 | 80857 | + | (T)n | Simple_repeat |
| scaffold11544 | 80972 | 80999 | + | (GTT)n | Simple_repeat |
| scaffold11544 | 81045 | 81103 | + | (TTG)n | Simple_repeat |
| scaffold11544 | 81105 | 81293 | + | (TTGTTG)n | Simple_repeat |
| scaffold11544 | 81819 | 81883 | + | (ATTGTTA)n | Simple_repeat |
| scaffold11544 | 81939 | 82892 | + | cacta | cacta(TransposonPSI) |
| scaffold11544 | 82955 | 83007 | + | (ATAAT)n | Simple_repeat |
| scaffold11544 | 83072 | 83178 | + | RS6538 | Unspecified |
| scaffold11544 | 84485 | 84654 | + | RS3763 | Unspecified |
| scaffold11544 | 84659 | 84745 | + | RS8646 | Unspecified |
| scaffold11544 | 84774 | 84798 | + | (TAAT)n | Simple_repeat |
| scaffold11544 | 88305 | 88610 | - | PL582 | Unspecified |
| scaffold11544 | 89477 | 89690 | + | RS1062 | Unspecified |
| scaffold11544 | 89615 | 89720 | - | RS620 | Unspecified |
| scaffold11544 | 89874 | 89980 | - | RS16015 | Unspecified |
| scaffold11544 | 89889 | 89978 | - | RS347 | Unspecified |
| scaffold11544 | 89979 | 90077 | - | RS347 | Unspecified |
| scaffold11544 | 90043 | 90590 | - | RS347 | Unspecified |
| scaffold11544 | 90544 | 90842 | + | RS15012 | Unspecified |
| scaffold11544 | 90853 | 91041 | + | RS17385 | Unspecified |
| scaffold11544 | 91080 | 91431 | + | RS15069 | Unspecified |
| scaffold11544 | 94518 | 94816 | + | RS15012 | Unspecified |
| scaffold11544 | 94827 | 95015 | + | RS17385 | Unspecified |
| scaffold11544 | 95054 | 95405 | + | RS15069 | Unspecified |
| scaffold11544 | 98980 | 99013 | + | (TAATAT)n | Simple_repeat |
| scaffold11544 | 99140 | 99193 | + | (AATATTT)n | Simple_repeat |
| scaffold11544 | 99213 | 99459 | - | RS3623 | Unspecified |
| scaffold11544 | 99707 | 99743 | + | (AGCTTTC)n | Simple_repeat |
| scaffold11544 | 100050 | 100088 | + | (T)n | Simple_repeat |
| scaffold11544 | 100138 | 100656 | - | PL307 | Unspecified |
| scaffold11544 | 101003 | 101041 | + | Gypsy-46_Mad-I | LTR/Gypsy |
| scaffold11544 | 101636 | 101670 | + | (TATTA)n | Simple_repeat |
| scaffold11544 | 104716 | 104924 | - | RS13085 | Unspecified |
| scaffold11544 | 105508 | 105690 | + | PL515 | Unspecified |
| scaffold11544 | 105837 | 106658 | + | LINE | LINE(TransposonPSI) |
| scaffold11544 | 105959 | 106640 | + | L1-1_GM | LINE/L1 |
| scaffold11544 | 106802 | 106846 | + | RS17105 | Unspecified |
| scaffold11544 | 107152 | 107447 | - | RS1746 | Unspecified |
| scaffold11544 | 107758 | 107986 | - | PL565 | Unspecified |
| scaffold11544 | 107888 | 108000 | - | RS204 | Unspecified |
| scaffold11544 | 108166 | 108229 | + | (ATA)n | Simple_repeat |
| scaffold11544 | 108362 | 108416 | + | (TTTTCAG)n | Simple_repeat |
| scaffold11544 | 108413 | 108444 | + | (T)n | Simple_repeat |
| scaffold11544 | 109234 | 109365 | - | RS1117 | Unspecified |
| scaffold11544 | 110510 | 110605 | + | (TTG)n | Simple_repeat |
| scaffold11544 | 111046 | 111145 | + | GA-rich | Low_complexity |
| scaffold11544 | 111846 | 112008 | - | RS13141 | Unspecified |
| scaffold11544 | 112588 | 112929 | + | MuDR-7_Mad | DNA/MULE-MuDR |
| scaffold11544 | 113781 | 113883 | + | Sat-1_CPa | Satellite |
| scaffold11544 | 114248 | 114625 | + | RS3102 | Unspecified |
| scaffold11544 | 114623 | 114662 | + | A-rich | Low_complexity |
| scaffold11544 | 115688 | 115728 | - | LTR-7_Mad-LTR | LTR |
| scaffold11544 | 115729 | 115739 | + | ATRAN | DNA? |
| scaffold11544 | 119798 | 119847 | + | (TATATTT)n | Simple_repeat |
| scaffold11544 | 119873 | 119912 | + | (AATGTGA)n | Simple_repeat |
| scaffold11544 | 120176 | 120231 | - | PL764 | Unspecified |
| scaffold11544 | 121284 | 121319 | + | (AATA)n | Simple_repeat |
| scaffold11544 | 122500 | 122953 | + | COP3_I_MT-int | LTR/Copia |
| scaffold11544 | 127730 | 127910 | + | RS38 | Unspecified |
| scaffold11544 | 128212 | 128475 | - | RS10 | Unspecified |
| scaffold11544 | 129086 | 129126 | + | (T)n | Simple_repeat |
| scaffold11544 | 129601 | 130140 | + | (TAC)n | Simple_repeat |
| scaffold11544 | 130124 | 130140 | + | (TAC)n | Simple_repeat |
| scaffold11544 | 130526 | 130542 | + | (T)n | Simple_repeat |
| scaffold11544 | 130995 | 131120 | + | RS1671 | Unspecified |
| scaffold11544 | 131414 | 131587 | + | RS371 | Unspecified |
| scaffold11544 | 131915 | 131934 | + | (A)n | Simple_repeat |
| scaffold11544 | 132268 | 132312 | + | A-rich | Low_complexity |
| scaffold11544 | 132527 | 132577 | + | (TA)n | Simple_repeat |
| scaffold11544 | 132687 | 132868 | + | RS13878 | Unspecified |
| scaffold11544 | 134258 | 134329 | - | RS1258 | Unspecified |
| scaffold11544 | 134352 | 134588 | + | RS10706 | Unspecified |
| scaffold11544 | 134595 | 134800 | + | RS523 | Unspecified |
| scaffold11544 | 134879 | 134940 | + | HAT-14_Mad | DNA/hAT-Tip100 |
| scaffold11544 | 135089 | 135145 | + | RS507 | Unspecified |
| scaffold11544 | 135359 | 135399 | - | LTR-7_Mad-LTR | LTR |
| scaffold11544 | 135543 | 135725 | + | RS13878 | Unspecified |
| scaffold11544 | 135816 | 136145 | + | BvL1-2 | LINE/L1 |
| scaffold11544 | 136183 | 136224 | + | (ATTAT)n | Simple_repeat |
| scaffold11544 | 136277 | 136318 | + | A-rich | Low_complexity |
| scaffold11544 | 136876 | 136942 | + | (AATTAT)n | Simple_repeat |
| scaffold11544 | 138496 | 138549 | - | Copia10-VV_I-int | LTR/Copia |
| scaffold11544 | 139590 | 139615 | + | (TGA)n | Simple_repeat |
| scaffold11544 | 140038 | 140134 | - | RS16382 | Unspecified |
| scaffold11544 | 140263 | 140360 | - | RS12449 | Unspecified |
| scaffold11544 | 140269 | 140388 | - | RS17262 | Unspecified |
| scaffold11544 | 140484 | 140686 | + | RS7953 | Unspecified |
| scaffold11544 | 141203 | 141593 | + | RS15907 | Unspecified |
| scaffold11544 | 141681 | 141799 | + | RS15529 | Unspecified |
| scaffold11544 | 143529 | 143670 | + | RS11310 | Unspecified |
| scaffold11544 | 144210 | 144509 | - | PL9 | Unspecified |
| scaffold11544 | 144531 | 144598 | + | GA-rich | Low_complexity |
| scaffold11544 | 145393 | 145453 | + | GA-rich | Low_complexity |
| scaffold11544 | 145559 | 145687 | + | RS586 | Unspecified |
| scaffold11544 | 146163 | 146189 | + | (ATTGTC)n | Simple_repeat |
| scaffold11544 | 146478 | 146520 | + | (A)n | Simple_repeat |