scaffold11580 Repeat List
genome start end strand repeat-name repeat-class
scaffold11580 616 639 + (AC)n Simple_repeat
scaffold11580 1040 1089 + (AGCTGC)n Simple_repeat
scaffold11580 1310 1355 - RS12277 Unspecified
scaffold11580 2282 2525 + RS6549 Unspecified
scaffold11580 3035 3508 - TY1_Copia TY1_Copia(TransposonPSI)
scaffold11580 3039 3499 - Copia-102_GM-I LTR/Copia
scaffold11580 5012 5375 - RS8479 Unspecified
scaffold11580 5382 5400 + (A)n Simple_repeat
scaffold11580 5399 5432 - RS8479 Unspecified
scaffold11580 5722 5815 - RS546 Unspecified
scaffold11580 5821 5931 - RS4412 Unspecified
scaffold11580 5858 5985 + RS10526 Unspecified
scaffold11580 5890 6042 - RS2087 Unspecified
scaffold11580 6352 6458 - RS12077 Unspecified
scaffold11580 6469 6509 + (AATTTTA)n Simple_repeat
scaffold11580 6939 7010 + (A)n Simple_repeat
scaffold11580 6994 7181 + RS904 Unspecified
scaffold11580 7429 7539 + RS10942 Unspecified
scaffold11580 7580 7617 + (ATA)n Simple_repeat
scaffold11580 7858 7906 + A-rich Low_complexity
scaffold11580 8044 8416 + RS325 Unspecified
scaffold11580 8946 9301 + RS595 Unspecified
scaffold11580 9205 9344 + RS595 Unspecified
scaffold11580 9340 9516 - RS3687 Unspecified
scaffold11580 9805 9830 + (T)n Simple_repeat
scaffold11580 10805 10855 + A-rich Low_complexity
scaffold11580 11424 11594 - TY1_Copia TY1_Copia(TransposonPSI)
scaffold11580 11494 11571 - ATCopia96_I-int LTR/Copia
scaffold11580 11826 12061 - RS6797 Unspecified
scaffold11580 12392 12580 - RS10100 Unspecified
scaffold11580 13590 13629 + (ATC)n Simple_repeat
scaffold11580 13630 13636 + (ATATC)n Simple_repeat
scaffold11580 13804 13828 + (A)n Simple_repeat
scaffold11580 14091 14311 - RS217 Unspecified
scaffold11580 14312 15415 + RS306 Unspecified
scaffold11580 15536 15707 + RS6630 Unspecified
scaffold11580 15906 15927 + (A)n Simple_repeat
scaffold11580 15955 16013 + (CACCTAC)n Simple_repeat
scaffold11580 16009 16035 + (CCG)n Simple_repeat
scaffold11580 16250 16365 + (TTG)n Simple_repeat
scaffold11580 16366 16580 - EnSpm1_SB DNA/CMC-EnSpm
scaffold11580 16581 16618 + (TTG)n Simple_repeat
scaffold11580 16621 16664 + (TTGTGG)n Simple_repeat
scaffold11580 16665 16749 + (ATA)n Simple_repeat
scaffold11580 16750 16785 + (GTG)n Simple_repeat
scaffold11580 16844 17586 + RS632 Unspecified
scaffold11580 17895 17980 + EnSpm-3_STu DNA/CMC-EnSpm
scaffold11580 17978 18079 + EnSpm-5_Mad DNA/CMC-EnSpm
scaffold11580 18015 18079 + EnSpm-5_Mad DNA/CMC-EnSpm
scaffold11580 18080 19919 + RS649 Unspecified
scaffold11580 20886 20933 + A-rich Low_complexity
scaffold11580 21621 21650 + (AAAAT)n Simple_repeat
scaffold11580 22612 22739 + RS9817 Unspecified
scaffold11580 22792 23119 + RS884 Unspecified
scaffold11580 23545 23585 + (TAATT)n Simple_repeat
scaffold11580 23682 23703 + (TA)n Simple_repeat
scaffold11580 23743 23863 + RS73 Unspecified
scaffold11580 24064 24135 + A-rich Low_complexity
scaffold11580 24926 25030 + RS6549 Unspecified
scaffold11580 26152 26249 - Copia-55_ST-I LTR/Copia
scaffold11580 26693 26787 - RS4475 Unspecified
scaffold11580 27386 27429 + A-rich Low_complexity
scaffold11580 27557 27661 + RS12819 Unspecified
scaffold11580 27777 27877 + PL754 Unspecified
scaffold11580 28306 28430 + RS11816 Unspecified
scaffold11580 28450 28523 + (T)n Simple_repeat
scaffold11580 28681 28719 + (GAAT)n Simple_repeat
scaffold11580 29409 29480 + RS507 Unspecified
scaffold11580 29535 29944 + RS8479 Unspecified
scaffold11580 29952 30068 + RS11816 Unspecified
scaffold11580 30404 30813 - RS8479 Unspecified
scaffold11580 31514 31569 - RS606 Unspecified
scaffold11580 31740 31846 + RS12277 Unspecified
scaffold11580 32299 32378 - RS16911 Unspecified
scaffold11580 32644 32684 + (GT)n Simple_repeat
scaffold11580 33691 33933 - RS138 Unspecified
scaffold11580 35195 35336 + RS13702 Unspecified
scaffold11580 35678 35900 + RS4262 Unspecified
scaffold11580 35993 36357 - RS6485 Unspecified
scaffold11580 36407 36464 + SINE2-1_STu SINE/tRNA
scaffold11580 37693 37773 + (CTTTATA)n Simple_repeat
scaffold11580 37982 38226 + RS6549 Unspecified
scaffold11580 38220 38456 + RS11816 Unspecified
scaffold11580 38785 39194 - RS8479 Unspecified
scaffold11580 39435 39683 - PL818 Unspecified
scaffold11580 39680 40012 - RS3896 Unspecified
scaffold11580 42336 42596 - RS47 Unspecified
scaffold11580 42760 42976 + PL727 Unspecified
scaffold11580 43128 43165 + (T)n Simple_repeat
scaffold11580 43128 43265 + (T)n Simple_repeat
scaffold11580 43151 43265 + RS1994 Unspecified
scaffold11580 44006 44279 + RS12043 Unspecified
scaffold11580 44267 44371 + RS12819 Unspecified
scaffold11580 44483 44626 + RS12277 Unspecified
scaffold11580 44646 44840 + RS11393 Unspecified
scaffold11580 45354 45672 - RS932 Unspecified
scaffold11580 45670 45743 + RS932 Unspecified
scaffold11580 45849 46444 - RS932 Unspecified
scaffold11580 46453 46527 + A-rich Low_complexity
scaffold11580 46557 47217 + PL132 Unspecified
scaffold11580 47281 47360 - Gypsy-30_GM-I LTR/Gypsy
scaffold11580 49204 49346 + RS13702 Unspecified
scaffold11580 49963 50072 + RS13584 Unspecified
scaffold11580 54771 54854 - LTR-7_Mad-LTR LTR
scaffold11580 57788 57856 + GA-rich Low_complexity
scaffold11580 58005 58050 + (A)n Simple_repeat
scaffold11580 58145 58165 + EnSpm-43_SBi DNA/CMC-EnSpm
scaffold11580 58166 58264 + (TTCAG)n Simple_repeat
scaffold11580 58266 58308 + (ATT)n Simple_repeat
scaffold11580 58309 58349 + Sat-1_CPa Satellite
scaffold11580 58350 58435 + (ATA)n Simple_repeat
scaffold11580 58436 58460 + EnSpm1_SB DNA/CMC-EnSpm
scaffold11580 58464 58513 + (TTCAG)n Simple_repeat
scaffold11580 58765 59341 + PL8 Unspecified
scaffold11580 59612 59737 + (TTG)n Simple_repeat
scaffold11580 59855 59989 - RS10540 Unspecified
scaffold11580 60386 60987 + RS6631 Unspecified
scaffold11580 62655 63380 + RS438 Unspecified
scaffold11580 66119 66302 - RS1440 Unspecified
scaffold11580 66496 66677 + RS1440 Unspecified
scaffold11580 66807 67100 + RS14213 Unspecified
scaffold11580 67151 67207 + (TTATATT)n Simple_repeat
scaffold11580 67576 67625 + (TAAAAC)n Simple_repeat
scaffold11580 67630 67655 + (T)n Simple_repeat
scaffold11580 69888 70056 - PL752 Unspecified
scaffold11580 70070 70292 + RS4262 Unspecified
scaffold11580 70359 70563 + RS5468 Unspecified
scaffold11580 70588 70654 + A-rich Low_complexity
scaffold11580 70773 71107 - RS794 Unspecified
scaffold11580 71764 71786 + (AAT)n Simple_repeat
scaffold11580 72417 72602 - RS5113 Unspecified
scaffold11580 72648 73103 + RS2103 Unspecified
scaffold11580 73152 73192 - Gypsy-72_GM-I LTR/Gypsy
scaffold11580 73250 73960 - Gypsy-72_GM-I LTR/Gypsy
scaffold11580 74147 74647 - Gypsy-72_GM-I LTR/Gypsy
scaffold11580 74759 74767 + (TTTTGT)n Simple_repeat
scaffold11580 74768 74814 + (TGTG)n Simple_repeat
scaffold11580 74810 74832 + (T)n Simple_repeat
scaffold11580 74815 74830 + (TTTTGT)n Simple_repeat
scaffold11580 74847 74896 - Copia-28_Pru-I LTR/Copia
scaffold11580 75481 75532 - Gypsy-23_ST-LTR LTR/Gypsy
scaffold11580 75641 75737 + Gypsy-29_PTr-LTR LTR/Gypsy
scaffold11580 75883 76048 + Gypsy-72_GM-I LTR/Gypsy
scaffold11580 75883 75926 + Gypsy-72_GM-I LTR/Gypsy
scaffold11580 75919 76048 + PL673 Unspecified
scaffold11580 76167 76487 + RS1534 Unspecified
scaffold11580 76314 76676 + RS4921 Unspecified
scaffold11580 76700 76834 - RS6485 Unspecified
scaffold11580 77263 77281 + (T)n Simple_repeat
scaffold11580 78577 78607 + (T)n Simple_repeat
scaffold11580 78640 78887 + RS6549 Unspecified
scaffold11580 78881 79117 + RS11816 Unspecified
scaffold11580 79446 79855 - RS8479 Unspecified
scaffold11580 80299 80377 - PL818 Unspecified
scaffold11580 80514 80584 + (TATTA)n Simple_repeat
scaffold11580 80580 80821 + RS1155 Unspecified
scaffold11580 80585 80791 + RS997 Unspecified
scaffold11580 80655 80943 - RS222 Unspecified
scaffold11580 80942 81157 + RS28 Unspecified
scaffold11580 81236 81296 + RS981 Unspecified
scaffold11580 81351 81432 + (TATTA)n Simple_repeat
scaffold11580 81441 82214 - RS95 Unspecified
scaffold11580 82264 82285 + (A)n Simple_repeat
scaffold11580 82344 82397 + (AATCAAT)n Simple_repeat
scaffold11580 82511 82612 + STOWAWAY12_SB DNA/TcMar-Stowaway
scaffold11580 83196 83469 + RS12043 Unspecified
scaffold11580 83674 83817 + RS12277 Unspecified
scaffold11580 83829 84022 + RS11393 Unspecified
scaffold11580 85639 85781 + RS13702 Unspecified
scaffold11580 86400 86509 + RS13584 Unspecified
scaffold11580 89004 89024 + (A)n Simple_repeat
scaffold11580 91284 91367 - LTR-7_Mad-LTR LTR
scaffold11580 94202 94270 + GA-rich Low_complexity
scaffold11580 94323 94357 + (TTG)n Simple_repeat
scaffold11580 94514 94553 + (TTGGG)n Simple_repeat
scaffold11580 94923 94941 + (A)n Simple_repeat
scaffold11580 95430 95457 + (TTTTAT)n Simple_repeat
scaffold11580 96318 96339 + (T)n Simple_repeat
scaffold11580 96690 96835 + RS11402 Unspecified
scaffold11580 96873 96900 + (TAA)n Simple_repeat
scaffold11580 99879 100131 - RS356 Unspecified
scaffold11580 100885 101438 + Copia-4_SL-LTR LTR/Copia
scaffold11580 102083 102204 + (TCGGG)n Simple_repeat
scaffold11580 102706 102782 + (TTAA)n Simple_repeat
scaffold11580 102877 102907 + (ATCAAA)n Simple_repeat
scaffold11580 102934 102974 + (ATTAAT)n Simple_repeat
scaffold11580 103109 103165 + (AT)n Simple_repeat
scaffold11580 103281 103311 + (T)n Simple_repeat
scaffold11580 105217 105643 + PL233 Unspecified
scaffold11580 105645 105761 - PL608 Unspecified
scaffold11580 105773 105855 + HAT-10_Mad DNA/hAT-Ac
scaffold11580 105896 105948 - HAT-9_Mad DNA/hAT-Ac
scaffold11580 106075 106196 + HAT-14_Mad DNA/hAT-Tip100
scaffold11580 106378 106416 + (T)n Simple_repeat
scaffold11580 106596 106965 - RS5977 Unspecified
scaffold11580 106958 107372 + RS2028 Unspecified
scaffold11580 107380 107881 + PL838 Unspecified
scaffold11580 108003 108058 + hAT-14N2_ZM DNA/hAT-Tip100
scaffold11580 108158 108337 + (TATATC)n Simple_repeat
scaffold11580 108395 108430 + (AATATT)n Simple_repeat
scaffold11580 110009 110046 + (TTGTT)n Simple_repeat
scaffold11580 110236 110837 + RS2003 Unspecified
scaffold11580 110640 111366 - RS1870 Unspecified
scaffold11580 112223 112262 + (TCATCTA)n Simple_repeat
scaffold11580 112580 112624 + (TTTAT)n Simple_repeat
scaffold11580 113052 113077 + (T)n Simple_repeat
scaffold11580 113315 113375 + (AATT)n Simple_repeat
scaffold11580 113652 114116 + RS217 Unspecified
scaffold11580 114172 114349 + RS1546 Unspecified
scaffold11580 114780 114837 + hAT-N1c_SB DNA/hAT-Ac
scaffold11580 114858 115013 - PL414 Unspecified
scaffold11580 116134 116161 + (T)n Simple_repeat
scaffold11580 116706 116727 + (T)n Simple_repeat
scaffold11580 117000 117196 + (TAAT)n Simple_repeat
scaffold11580 119704 120035 - RS8 Unspecified
scaffold11580 121497 121630 - Copia-2_SL-LTR LTR/Copia
scaffold11580 121677 121744 - PL701 Unspecified
scaffold11580 122901 122953 + RS17600 Unspecified
scaffold11580 122910 123175 - RS17600 Unspecified
scaffold11580 123138 123188 + RS17600 Unspecified
scaffold11580 123671 123701 + A-rich Low_complexity
scaffold11580 127616 127762 + PL172 Unspecified
scaffold11580 127940 128040 + PL855 Unspecified
scaffold11580 128177 128223 + A-rich Low_complexity
scaffold11580 129193 129342 + RS43 Unspecified
scaffold11580 129427 129511 - LTR-7_Mad-LTR LTR
scaffold11580 129564 129611 + PL700 Unspecified
scaffold11580 131678 131709 + (AGCACC)n Simple_repeat
scaffold11580 132505 132770 - RS106 Unspecified
scaffold11580 132989 133317 + Copia-4_GM-I LTR/Copia
scaffold11580 133538 133609 + A-rich Low_complexity
scaffold11580 133997 134149 + Copia-4_GM-I LTR/Copia
scaffold11580 134151 134545 - RS2370 Unspecified
scaffold11580 135964 136151 - RS347 Unspecified
scaffold11580 137606 137623 + (T)n Simple_repeat
scaffold11580 137721 138436 + RS1267 Unspecified
scaffold11580 138435 138559 + RS1267 Unspecified
scaffold11580 138704 138750 + (TAGCAC)n Simple_repeat
scaffold11580 139196 139439 + RS581 Unspecified
scaffold11580 139876 139923 + (TCATTTA)n Simple_repeat
scaffold11580 141108 141150 + (ATTATA)n Simple_repeat
scaffold11580 141624 141645 + (T)n Simple_repeat
scaffold11580 141656 141904 - RS145 Unspecified
scaffold11580 142204 142253 + RS133 Unspecified
scaffold11580 142412 142437 + (A)n Simple_repeat
scaffold11580 145286 145437 - RS7263 Unspecified
scaffold11580 146544 146872 - RS1436 Unspecified
scaffold11580 146671 146896 + RS17917 Unspecified
scaffold11580 146936 147952 + Copia-4_GM-I LTR/Copia
scaffold11580 148009 148112 - Copia-4_GM-I LTR/Copia
scaffold11580 148111 148345 - RS5856 Unspecified
scaffold11580 148349 148525 - RS1362 Unspecified
scaffold11580 148769 148836 + (TTAT)n Simple_repeat
scaffold11580 149045 149063 + (A)n Simple_repeat
scaffold11580 149072 149304 + (AT)n Simple_repeat
scaffold11580 149237 149304 + (AT)n Simple_repeat
scaffold11580 150544 150573 + (T)n Simple_repeat
scaffold11580 151366 151403 + (TTAAT)n Simple_repeat
scaffold11580 151405 151488 - HADES_TA DNA/TcMar-Stowaway
scaffold11580 151538 151763 - RS586 Unspecified
scaffold11580 152614 152652 + (TGAGTTG)n Simple_repeat
scaffold11580 153363 155450 - RS934 Unspecified
scaffold11580 154470 155896 + RS1496 Unspecified
scaffold11580 156563 156616 + Gypsy-47_BD-I LTR/Gypsy
scaffold11580 157421 157500 + Gypsy-53_GM-I LTR/Gypsy
scaffold11580 158660 158736 + A-rich Low_complexity
scaffold11580 158927 158971 + Gypsy-14_SMo-I LTR/Gypsy
scaffold11580 158943 160710 + Gypsy-53_GM-I LTR/Gypsy
scaffold11580 161099 161303 + Gypsy-53_GM-I LTR/Gypsy
scaffold11580 161641 161750 + Gypsy-29_PTr-LTR LTR/Gypsy
scaffold11580 162264 162318 + (TTAT)n Simple_repeat
scaffold11580 163123 163300 + (CCCGA)n Simple_repeat
scaffold11580 163385 163420 + (T)n Simple_repeat
scaffold11580 163782 163806 + (A)n Simple_repeat
scaffold11580 164484 164522 + (ATTT)n Simple_repeat
scaffold11580 164561 164608 + A-rich Low_complexity
scaffold11580 165075 165121 + (A)n Simple_repeat
scaffold11580 165075 165413 + (A)n Simple_repeat