scaffold11682 Repeat List
genome start end strand repeat-name repeat-class
scaffold11682 649 706 + Ogre-PT3_I-int LTR/Gypsy
scaffold11682 1249 1385 + Ogre-PT1_I-int LTR/Gypsy
scaffold11682 1636 2985 + Gypsy-38_Mad-I LTR/Gypsy
scaffold11682 3073 3189 + Atlantys1_I-int LTR/Gypsy
scaffold11682 3305 3411 + Atlantys1_I-int LTR/Gypsy
scaffold11682 3632 4737 + Gret1_I-int LTR/Gypsy
scaffold11682 5091 5508 + PL844 Unspecified
scaffold11682 7076 7429 + RS5886 Unspecified
scaffold11682 7574 7992 - PL903 Unspecified
scaffold11682 8417 8450 + (GTTCT)n Simple_repeat
scaffold11682 9069 9102 + (GAACA)n Simple_repeat
scaffold11682 11377 11993 - PL219 Unspecified
scaffold11682 12646 12703 - Gypsy-9_Mad-I LTR/Gypsy
scaffold11682 12930 13000 + (T)n Simple_repeat
scaffold11682 13210 13255 + (CATTCCA)n Simple_repeat
scaffold11682 13565 13608 - Gypsy-10_Mad-I LTR/Gypsy
scaffold11682 13980 14012 + A-rich Low_complexity
scaffold11682 14531 15057 - MEGY-I_MT LTR/Gypsy
scaffold11682 15491 15540 + (TGG)n Simple_repeat
scaffold11682 15905 16152 - PIGY-LTR_PS LTR/Gypsy
scaffold11682 16762 17162 - RS695 Unspecified
scaffold11682 17453 17617 - RS2098 Unspecified
scaffold11682 17701 17736 + A-rich Low_complexity
scaffold11682 21098 21248 + RS15724 Unspecified
scaffold11682 22706 22765 - RS363 Unspecified
scaffold11682 22761 23026 + RS106 Unspecified
scaffold11682 23152 23450 - PL9 Unspecified
scaffold11682 24188 24476 + RS16147 Unspecified
scaffold11682 24494 24531 + (AAAT)n Simple_repeat
scaffold11682 24983 26164 - RS265 Unspecified
scaffold11682 26471 26507 + (ATT)n Simple_repeat
scaffold11682 26516 26625 - RS8491 Unspecified
scaffold11682 26688 26750 + RS8491 Unspecified
scaffold11682 26757 26884 + RS2787 Unspecified
scaffold11682 27069 27128 + (TAAGAC)n Simple_repeat
scaffold11682 28424 28498 + (TG)n Simple_repeat
scaffold11682 28528 28561 + (T)n Simple_repeat
scaffold11682 29072 29542 - RS8491 Unspecified
scaffold11682 30507 30601 + (ACA)n Simple_repeat
scaffold11682 30816 32465 - RS265 Unspecified
scaffold11682 34295 34534 - RS445 Unspecified
scaffold11682 36104 36238 + TRAMET1 DNA/TcMar-Stowaway
scaffold11682 38098 38463 + RS703 Unspecified
scaffold11682 38666 38709 + (TAATGCA)n Simple_repeat
scaffold11682 39193 39427 + RS3159 Unspecified
scaffold11682 39788 39816 + (TGTATGT)n Simple_repeat
scaffold11682 39817 39849 + (TGTA)n Simple_repeat
scaffold11682 40796 40833 + (ACAACAT)n Simple_repeat
scaffold11682 40923 41274 - RS2305 Unspecified
scaffold11682 42839 42880 + (AATCA)n Simple_repeat
scaffold11682 43835 44013 + RS6450 Unspecified
scaffold11682 44334 44406 + (AATC)n Simple_repeat
scaffold11682 45664 45688 + (ATTG)n Simple_repeat
scaffold11682 45767 45839 + (AATC)n Simple_repeat
scaffold11682 47394 47619 + RS9132 Unspecified
scaffold11682 47729 47774 + (AATACATC)n Simple_repeat
scaffold11682 47865 48053 + RS11226 Unspecified
scaffold11682 48971 49033 + (ACC)n Simple_repeat
scaffold11682 49451 49538 + (TGTATTG)n Simple_repeat
scaffold11682 49765 49961 + RS106 Unspecified
scaffold11682 50934 50962 + (ATATTTTT)n Simple_repeat
scaffold11682 50963 50998 + (ATTTTT)n Simple_repeat
scaffold11682 51200 51624 + PL583 Unspecified
scaffold11682 51623 51965 + PL5 Unspecified
scaffold11682 52027 52263 + RS18353 Unspecified
scaffold11682 52653 52673 + (TA)n Simple_repeat
scaffold11682 52977 53095 + RS14409 Unspecified
scaffold11682 53942 53973 + (CTTTT)n Simple_repeat
scaffold11682 54088 54116 + (ATATTTTT)n Simple_repeat
scaffold11682 54117 54152 + (ATTTTT)n Simple_repeat
scaffold11682 54354 54778 + PL583 Unspecified
scaffold11682 54777 55117 + PL5 Unspecified
scaffold11682 55140 57026 + ENSPM2_VV DNA/CMC-EnSpm
scaffold11682 57422 57803 + ENSPM2_MT DNA/CMC-EnSpm
scaffold11682 58180 58567 - PL290 Unspecified
scaffold11682 58630 59086 - RS3270 Unspecified
scaffold11682 59348 59371 + (AT)n Simple_repeat
scaffold11682 59428 59492 + ENSPM-6_ZM DNA/CMC-EnSpm
scaffold11682 60141 60513 - RS2275 Unspecified
scaffold11682 60533 60661 - RS3251 Unspecified
scaffold11682 60668 60706 + (T)n Simple_repeat
scaffold11682 60774 60870 + (AGT)n Simple_repeat
scaffold11682 61200 62163 + HARB-1_SBi DNA/PIF-Harbinger
scaffold11682 62386 62442 + (TTTTTA)n Simple_repeat
scaffold11682 62571 62608 + A-rich Low_complexity
scaffold11682 62838 62956 + (TAC)n Simple_repeat
scaffold11682 63262 63463 + RS1128 Unspecified
scaffold11682 63471 63572 - Copia-3_PTri-I LTR/Copia
scaffold11682 63604 63670 - RS18111 Unspecified
scaffold11682 63692 63743 - Copia-3_PTri-I LTR/Copia
scaffold11682 64225 65854 + PL647 Unspecified
scaffold11682 65993 66785 + RS1128 Unspecified
scaffold11682 66143 66966 + RS2765 Unspecified
scaffold11682 67645 68543 + Copia-65_Mad-I LTR/Copia
scaffold11682 68857 69124 + Copia-65_Mad-I LTR/Copia
scaffold11682 69973 70236 - RS257 Unspecified
scaffold11682 70622 70639 + (T)n Simple_repeat
scaffold11682 71167 71189 + (T)n Simple_repeat
scaffold11682 71715 71755 + (ATTTTT)n Simple_repeat
scaffold11682 72043 72104 + A-rich Low_complexity
scaffold11682 74768 74795 + (AAGAA)n Simple_repeat
scaffold11682 76404 76440 + A-rich Low_complexity
scaffold11682 76890 76903 + (ACAAC)n Simple_repeat
scaffold11682 76904 76948 + (AC)n Simple_repeat
scaffold11682 77178 77212 + (AGC)n Simple_repeat
scaffold11682 78175 78242 + (TGA)n Simple_repeat
scaffold11682 78254 78316 + A-rich Low_complexity
scaffold11682 78335 78406 + (TTTGA)n Simple_repeat
scaffold11682 78404 78564 + RS14940 Unspecified
scaffold11682 79455 79504 + (AACTTCAGAT)n Simple_repeat
scaffold11682 79510 79806 + (AAT)n Simple_repeat
scaffold11682 79510 79914 + (AAT)n Simple_repeat
scaffold11682 79785 79914 + RS1298 Unspecified
scaffold11682 80073 80103 + (T)n Simple_repeat
scaffold11682 80073 80360 + (T)n Simple_repeat
scaffold11682 80099 80360 + RS4227 Unspecified
scaffold11682 80430 80475 + (TTACTC)n Simple_repeat
scaffold11682 80602 80826 + RS12703 Unspecified
scaffold11682 81999 83450 - LINE LINE(TransposonPSI)
scaffold11682 82330 83117 - L1-1_PTr LINE/L1
scaffold11682 83906 83922 + (TAT)n Simple_repeat
scaffold11682 83906 84080 + (TAT)n Simple_repeat
scaffold11682 83920 84080 + RS14940 Unspecified
scaffold11682 84453 84812 - RS1541 Unspecified
scaffold11682 86036 86188 + RS6909 Unspecified
scaffold11682 86513 86541 + (TAGTTA)n Simple_repeat
scaffold11682 86764 86811 + A-rich Low_complexity
scaffold11682 88401 88444 + (AATTGA)n Simple_repeat
scaffold11682 91179 91852 - MEGY-I_MT LTR/Gypsy
scaffold11682 92911 93067 - MEGY-I_MT LTR/Gypsy
scaffold11682 93153 93367 - MEGY-I_MT LTR/Gypsy
scaffold11682 93721 94309 + RS1835 Unspecified
scaffold11682 94315 94522 - RS351 Unspecified
scaffold11682 94521 94614 - PL389 Unspecified
scaffold11682 94575 95959 - RS254 Unspecified
scaffold11682 96656 96867 + PL389 Unspecified
scaffold11682 96861 97889 - LINE LINE(TransposonPSI)
scaffold11682 97966 98840 + RS12612 Unspecified
scaffold11682 98566 98894 + RS6738 Unspecified
scaffold11682 99179 99311 + (ATG)n Simple_repeat
scaffold11682 99334 99383 + (ATT)n Simple_repeat
scaffold11682 100687 100708 + (G)n Simple_repeat
scaffold11682 100832 100867 + (TTATTG)n Simple_repeat
scaffold11682 103424 103582 + RS620 Unspecified
scaffold11682 104769 104787 + (TA)n Simple_repeat
scaffold11682 106083 106222 - RS5416 Unspecified
scaffold11682 109555 109592 + G-rich Low_complexity
scaffold11682 109754 109786 + (TCCCT)n Simple_repeat
scaffold11682 111094 111127 + (AGTCC)n Simple_repeat
scaffold11682 111452 111522 + A-rich Low_complexity
scaffold11682 111721 111750 + G-rich Low_complexity
scaffold11682 111970 112081 + PL168 Unspecified
scaffold11682 112082 112305 - PL658 Unspecified
scaffold11682 112116 112712 - PL561 Unspecified
scaffold11682 112931 112984 + (GTGA)n Simple_repeat
scaffold11682 113058 113243 - PL255 Unspecified
scaffold11682 113359 113623 + RS3651 Unspecified
scaffold11682 114005 114035 + (T)n Simple_repeat
scaffold11682 114136 114169 + (T)n Simple_repeat
scaffold11682 114330 114346 + (T)n Simple_repeat
scaffold11682 115857 115900 + (ATT)n Simple_repeat
scaffold11682 116093 116131 + A-rich Low_complexity
scaffold11682 116514 116550 + (TAGGGT)n Simple_repeat
scaffold11682 116615 116651 + (TCTATCT)n Simple_repeat
scaffold11682 116744 116760 + (AG)n Simple_repeat
scaffold11682 116843 117087 + RS4 Unspecified
scaffold11682 117380 117404 + (A)n Simple_repeat
scaffold11682 117657 117781 + RS38 Unspecified
scaffold11682 118154 118556 - RS2442 Unspecified
scaffold11682 118291 118668 + RS3600 Unspecified
scaffold11682 118930 118969 + RS38 Unspecified
scaffold11682 119572 119620 + (TATC)n Simple_repeat
scaffold11682 119784 119908 - RS170 Unspecified
scaffold11682 120023 120061 + (TTTCTAC)n Simple_repeat
scaffold11682 120444 120506 + (TTCATT)n Simple_repeat
scaffold11682 120729 120944 - RS4788 Unspecified
scaffold11682 121014 121063 + (AATT)n Simple_repeat
scaffold11682 121064 121323 - RS47 Unspecified
scaffold11682 121806 121962 + RS1489 Unspecified
scaffold11682 121826 122080 + RS3579 Unspecified
scaffold11682 122123 123199 + RS1078 Unspecified
scaffold11682 124424 124686 - RS26 Unspecified
scaffold11682 125163 125223 + (TTTTAA)n Simple_repeat
scaffold11682 125254 125284 + A-rich Low_complexity
scaffold11682 127278 127356 + (TTAA)n Simple_repeat
scaffold11682 128914 129297 - RS512 Unspecified
scaffold11682 129530 130079 + RS3121 Unspecified
scaffold11682 129849 130778 + RS1367 Unspecified
scaffold11682 130881 131651 + TY1_Copia TY1_Copia(TransposonPSI)
scaffold11682 131630 131809 + TY1_Copia TY1_Copia(TransposonPSI)
scaffold11682 131850 132178 - RS624 Unspecified
scaffold11682 132251 132324 + (ACC)n Simple_repeat
scaffold11682 132654 132816 - RS8663 Unspecified
scaffold11682 132871 132906 + (TTTTTC)n Simple_repeat
scaffold11682 133082 133621 + cacta cacta(TransposonPSI)
scaffold11682 134269 134515 + (TTAC)n Simple_repeat
scaffold11682 134269 134329 + (TTAC)n Simple_repeat
scaffold11682 134300 134515 - RS3251 Unspecified
scaffold11682 134498 135129 - RS2190 Unspecified
scaffold11682 135143 135176 + (ATT)n Simple_repeat
scaffold11682 135340 135385 + (AATTAT)n Simple_repeat
scaffold11682 135880 136118 + RS1327 Unspecified
scaffold11682 135889 136151 + RS11316 Unspecified
scaffold11682 136282 136325 + A-rich Low_complexity
scaffold11682 136516 136813 - RS588 Unspecified
scaffold11682 136840 137070 - RS1785 Unspecified
scaffold11682 137002 137190 + RS952 Unspecified
scaffold11682 137690 138155 + RS35 Unspecified
scaffold11682 138584 138607 + (ATTC)n Simple_repeat
scaffold11682 139015 139695 - Copia-10_ST-I LTR/Copia
scaffold11682 139988 140011 + (TGAA)n Simple_repeat
scaffold11682 140191 140498 + Copia-2_ST-I LTR/Copia
scaffold11682 140588 141443 + Copia-2_ST-I LTR/Copia
scaffold11682 141808 143403 + Copia-2_ST-I LTR/Copia
scaffold11682 143546 143569 + (ATTC)n Simple_repeat
scaffold11682 145181 145272 + RS4475 Unspecified
scaffold11682 145605 145725 + RS12449 Unspecified
scaffold11682 145605 145704 - RS4475 Unspecified
scaffold11682 146727 146889 + RS4 Unspecified
scaffold11682 146955 146992 + A-rich Low_complexity
scaffold11682 147137 147215 + RS4 Unspecified
scaffold11682 149105 149132 + (ATAA)n Simple_repeat
scaffold11682 149329 149423 + RS4475 Unspecified
scaffold11682 150182 150409 + PL2 Unspecified
scaffold11682 150893 150922 + (CGACC)n Simple_repeat
scaffold11682 151129 151571 + PL2 Unspecified
scaffold11682 151656 151917 - RS26 Unspecified
scaffold11682 152852 152873 + (G)n Simple_repeat
scaffold11682 153027 153104 + (TTTTG)n Simple_repeat
scaffold11682 153253 153590 + (TA)n Simple_repeat
scaffold11682 153253 153311 + (TA)n Simple_repeat
scaffold11682 153290 153590 + RS9490 Unspecified
scaffold11682 154210 154240 + (TAC)n Simple_repeat
scaffold11682 154360 154411 + (TTTA)n Simple_repeat
scaffold11682 155603 156776 - L1-1_PTr LINE/L1
scaffold11682 157471 157552 + (TTATAAT)n Simple_repeat
scaffold11682 159233 159303 - L1-1_PTr LINE/L1
scaffold11682 159551 159626 - Gypsy-7_SMo-I LTR/Gypsy
scaffold11682 159940 160005 + (TTTAGTA)n Simple_repeat
scaffold11682 160433 160481 + (TAA)n Simple_repeat
scaffold11682 160646 160788 + PL169 Unspecified
scaffold11682 160794 160948 - RS7827 Unspecified
scaffold11682 161155 161222 - LINE1-23_SBi LINE/L1
scaffold11682 161955 163574 - LINE LINE(TransposonPSI)
scaffold11682 162040 162880 - LINE1I_MT LINE/L1
scaffold11682 163287 163354 - L1-1_SMo LINE/L1-Tx1
scaffold11682 163608 163666 + Copia-126_SB-I LTR/Copia
scaffold11682 164424 164459 + A-rich Low_complexity
scaffold11682 164657 164921 + RS106 Unspecified
scaffold11682 165113 165161 + (TTAA)n Simple_repeat
scaffold11682 165703 165733 + (A)n Simple_repeat
scaffold11682 165792 165843 + RS898 Unspecified
scaffold11682 166257 166307 + (A)n Simple_repeat
scaffold11682 166571 166602 + (TTG)n Simple_repeat
scaffold11682 167685 167714 + (A)n Simple_repeat
scaffold11682 168146 168424 + RS595 Unspecified
scaffold11682 169752 169808 + A-rich Low_complexity
scaffold11682 170005 170072 + (ACCAACT)n Simple_repeat
scaffold11682 170112 170156 + (CGC)n Simple_repeat
scaffold11682 170201 170238 + A-rich Low_complexity
scaffold11682 170355 170373 + (A)n Simple_repeat
scaffold11682 171264 171507 + RS4 Unspecified
scaffold11682 172353 172429 + (TTTGTA)n Simple_repeat
scaffold11682 173288 173308 + (AT)n Simple_repeat
scaffold11682 173309 173360 + A-rich Low_complexity
scaffold11682 174400 174440 + (CTATAT)n Simple_repeat
scaffold11682 174474 174498 + (TTTA)n Simple_repeat
scaffold11682 174816 175074 + RS1 Unspecified
scaffold11682 176333 176368 + (TA)n Simple_repeat
scaffold11682 176607 176639 + A-rich Low_complexity
scaffold11682 176662 176721 + (ATT)n Simple_repeat
scaffold11682 177502 177537 + (T)n Simple_repeat
scaffold11682 178380 179529 + Helitron-3_SBi RC/Helitron
scaffold11682 179817 180397 + Helitron-3_SBi RC/Helitron
scaffold11682 180732 180818 + Helitron1_OS RC/Helitron
scaffold11682 180876 181092 + Helitron-5_ZM RC/Helitron
scaffold11682 181523 181613 + GA-rich Low_complexity
scaffold11682 182034 182333 + RS606 Unspecified
scaffold11682 182218 182480 + RS2385 Unspecified
scaffold11682 182511 182714 + G-rich Low_complexity
scaffold11682 182735 182795 + GA-rich Low_complexity
scaffold11682 182993 183211 - MuDR-11_GM DNA/MULE-MuDR
scaffold11682 184140 184208 + (CAATATA)n Simple_repeat
scaffold11682 184418 184451 + A-rich Low_complexity
scaffold11682 186393 186552 - RS4297 Unspecified
scaffold11682 188348 188855 + RS7030 Unspecified
scaffold11682 188875 189348 - RS7030 Unspecified
scaffold11682 191157 191306 + RS4297 Unspecified
scaffold11682 191490 191649 + RS4297 Unspecified
scaffold11682 192785 192844 + A-rich Low_complexity
scaffold11682 193658 193674 + (T)n Simple_repeat
scaffold11682 193681 193714 + (TTTGTA)n Simple_repeat
scaffold11682 194965 195250 + (CCCTTAA)n Simple_repeat
scaffold11682 195245 195395 + PL9 Unspecified
scaffold11682 195301 195546 + (TAACCCT)n Simple_repeat
scaffold11682 195398 195546 + (TAACCCT)n Simple_repeat
scaffold11682 195540 195617 + PL9 Unspecified
scaffold11682 198158 198869 - RS810 Unspecified
scaffold11682 199504 199530 + (AAC)n Simple_repeat
scaffold11682 199551 199634 + (TTTT)n Simple_repeat
scaffold11682 200355 200393 + A-rich Low_complexity
scaffold11682 201696 201736 + A-rich Low_complexity
scaffold11682 201743 201769 - Gypsy-16_Mad-I LTR/Gypsy
scaffold11682 201770 203100 - RS1565 Unspecified
scaffold11682 203412 203492 + RS3169 Unspecified
scaffold11682 203475 203853 + RS160 Unspecified
scaffold11682 203842 204663 + RS3169 Unspecified
scaffold11682 204791 204866 + RS3169 Unspecified
scaffold11682 207566 207610 + A-rich Low_complexity
scaffold11682 207890 207911 + (CAC)n Simple_repeat
scaffold11682 208600 208806 - RS8059 Unspecified
scaffold11682 208859 208955 - RS8059 Unspecified
scaffold11682 209185 209539 - RS1535 Unspecified
scaffold11682 213710 213732 + (A)n Simple_repeat
scaffold11682 213746 213854 - RS1879 Unspecified
scaffold11682 215881 216371 + Gypsy-23_VV-I LTR/Gypsy
scaffold11682 216761 216816 + Gypsy-10_Pru-LTR LTR/Gypsy
scaffold11682 217238 217290 + (ACA)n Simple_repeat
scaffold11682 217324 217366 + (TTAT)n Simple_repeat
scaffold11682 219057 219097 + A-rich Low_complexity
scaffold11682 221002 221021 + (T)n Simple_repeat
scaffold11682 223171 223320 + (AAT)n Simple_repeat
scaffold11682 223430 223460 + A-rich Low_complexity
scaffold11682 223461 223510 + (TAT)n Simple_repeat
scaffold11682 223511 223562 + A-rich Low_complexity
scaffold11682 223581 223610 + A-rich Low_complexity
scaffold11682 223617 223686 + (TAA)n Simple_repeat
scaffold11682 224966 225211 + (CCCGA)n Simple_repeat
scaffold11682 225476 225518 + A-rich Low_complexity
scaffold11682 225528 225638 + (CCCGA)n Simple_repeat
scaffold11682 226532 226588 + (GGTTTT)n Simple_repeat
scaffold11682 227706 227881 + PIGY-LTR_PS LTR/Gypsy
scaffold11682 228109 228756 - RS1207 Unspecified
scaffold11682 228215 228855 - RS661 Unspecified
scaffold11682 229045 229621 + MEGY-I_MT LTR/Gypsy
scaffold11682 230127 230163 + (TTTTCT)n Simple_repeat
scaffold11682 230886 230950 + A-rich Low_complexity
scaffold11682 232425 232511 + (TTATAA)n Simple_repeat
scaffold11682 233540 233756 + PL5 Unspecified
scaffold11682 234716 234752 + RS572 Unspecified
scaffold11682 235576 235972 - MEGY-I_MT LTR/Gypsy
scaffold11682 237501 237538 + (ATGTTT)n Simple_repeat
scaffold11682 238276 238314 + (GT)n Simple_repeat
scaffold11682 239805 239859 + (AACAAG)n Simple_repeat
scaffold11682 240038 240060 + (TA)n Simple_repeat
scaffold11682 240130 240408 + RS7664 Unspecified
scaffold11682 240988 241230 + (TCGGG)n Simple_repeat
scaffold11682 241388 241597 + (TCGGG)n Simple_repeat
scaffold11682 242888 242930 + (TTTG)n Simple_repeat
scaffold11682 244013 244303 + LTR-1_SBi-LTR LTR
scaffold11682 244502 244749 + LTR-1_SBi-LTR LTR
scaffold11682 245169 245201 + (TTTTG)n Simple_repeat
scaffold11682 245688 246710 - gypsy gypsy(TransposonPSI)
scaffold11682 245950 246632 - Gypsy-20_BRa-I LTR/Gypsy
scaffold11682 247369 247451 - Gypsy-20_BRa-I LTR/Gypsy
scaffold11682 247542 248204 - PL889 Unspecified
scaffold11682 247821 248419 + RS57 Unspecified
scaffold11682 249053 249111 + Gypsy-72-LTR_ZM LTR/Gypsy
scaffold11682 249318 249734 - PL866 Unspecified
scaffold11682 249968 250236 + LTR-1_SBi-LTR LTR
scaffold11682 250441 250724 + LTR2-ZM_LTR LTR
scaffold11682 250946 250992 + A-rich Low_complexity
scaffold11682 251108 251137 + (AATCT)n Simple_repeat
scaffold11682 251475 251511 + (AT)n Simple_repeat
scaffold11682 252016 252570 + RS3091 Unspecified
scaffold11682 252879 252950 + A-rich Low_complexity
scaffold11682 253105 253282 - PL247 Unspecified