scaffold11742 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold11742 |
125 |
183 |
+ |
(TTC)n |
Simple_repeat |
| scaffold11742 |
780 |
955 |
- |
RS5829 |
Unspecified |
| scaffold11742 |
1614 |
2586 |
+ |
RS3437 |
Unspecified |
| scaffold11742 |
2618 |
2729 |
- |
RS11245 |
Unspecified |
| scaffold11742 |
2754 |
2928 |
- |
RS1261 |
Unspecified |
| scaffold11742 |
3183 |
3276 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
3756 |
3968 |
+ |
RS16888 |
Unspecified |
| scaffold11742 |
4364 |
4422 |
+ |
RS10543 |
Unspecified |
| scaffold11742 |
4990 |
5095 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold11742 |
6988 |
7081 |
+ |
(GTG)n |
Simple_repeat |
| scaffold11742 |
8227 |
8326 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold11742 |
9798 |
9853 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
11061 |
11131 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
11782 |
11807 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
13414 |
13500 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
13613 |
13642 |
+ |
(CTT)n |
Simple_repeat |
| scaffold11742 |
13777 |
13803 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
13922 |
14051 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold11742 |
15862 |
15882 |
+ |
(TC)n |
Simple_repeat |
| scaffold11742 |
17392 |
18170 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold11742 |
17671 |
17780 |
+ |
RS2018 |
Unspecified |
| scaffold11742 |
21615 |
21658 |
+ |
(ATTTGTC)n |
Simple_repeat |
| scaffold11742 |
26094 |
26182 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold11742 |
26184 |
26531 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold11742 |
26533 |
27138 |
+ |
(TTACTA)n |
Simple_repeat |
| scaffold11742 |
27064 |
27138 |
+ |
(TTACTA)n |
Simple_repeat |
| scaffold11742 |
27176 |
27369 |
- |
PL501 |
Unspecified |
| scaffold11742 |
27362 |
27549 |
+ |
PL501 |
Unspecified |
| scaffold11742 |
27770 |
27875 |
+ |
RS11902 |
Unspecified |
| scaffold11742 |
27875 |
27982 |
+ |
(TAA)n |
Simple_repeat |
| scaffold11742 |
28013 |
28062 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold11742 |
29136 |
29235 |
- |
Copia-75_ST-I |
LTR/Copia |
| scaffold11742 |
29469 |
29552 |
- |
Copia-75_ST-I |
LTR/Copia |
| scaffold11742 |
30772 |
30852 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
31904 |
32183 |
- |
RS17600 |
Unspecified |
| scaffold11742 |
32206 |
32224 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
32446 |
32637 |
+ |
(CGCCAC)n |
Simple_repeat |
| scaffold11742 |
34793 |
34935 |
- |
RS452 |
Unspecified |
| scaffold11742 |
35299 |
35389 |
+ |
RS4475 |
Unspecified |
| scaffold11742 |
35301 |
35403 |
+ |
RS13929 |
Unspecified |
| scaffold11742 |
36416 |
36450 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
36511 |
36535 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
37125 |
37181 |
+ |
RS1649 |
Unspecified |
| scaffold11742 |
37199 |
37486 |
- |
RS146 |
Unspecified |
| scaffold11742 |
38315 |
38338 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
38592 |
38616 |
+ |
(AATA)n |
Simple_repeat |
| scaffold11742 |
38967 |
39006 |
+ |
(AATA)n |
Simple_repeat |
| scaffold11742 |
39460 |
39509 |
+ |
(TAATCTA)n |
Simple_repeat |
| scaffold11742 |
39739 |
39852 |
+ |
RS12449 |
Unspecified |
| scaffold11742 |
40090 |
40126 |
+ |
(CCA)n |
Simple_repeat |
| scaffold11742 |
41045 |
41063 |
+ |
(TAA)n |
Simple_repeat |
| scaffold11742 |
41566 |
41613 |
- |
RS43 |
Unspecified |
| scaffold11742 |
41667 |
41703 |
+ |
(ATA)n |
Simple_repeat |
| scaffold11742 |
42488 |
42712 |
+ |
RS18 |
Unspecified |
| scaffold11742 |
42875 |
42937 |
+ |
(AATTTA)n |
Simple_repeat |
| scaffold11742 |
42938 |
43185 |
+ |
RS4 |
Unspecified |
| scaffold11742 |
43289 |
43379 |
+ |
(GACGAA)n |
Simple_repeat |
| scaffold11742 |
43593 |
43634 |
+ |
(TATCATT)n |
Simple_repeat |
| scaffold11742 |
45867 |
48551 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold11742 |
45888 |
46743 |
- |
Copia-5_GM-I |
LTR/Copia |
| scaffold11742 |
47106 |
47926 |
- |
Copia-5_GM-I |
LTR/Copia |
| scaffold11742 |
48399 |
48540 |
- |
Copia-5_GM-I |
LTR/Copia |
| scaffold11742 |
48795 |
49631 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold11742 |
49459 |
49570 |
- |
Copia-5_GM-I |
LTR/Copia |
| scaffold11742 |
50446 |
50473 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
50611 |
50657 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
50685 |
50943 |
- |
RS1 |
Unspecified |
| scaffold11742 |
51628 |
51664 |
+ |
(TATT)n |
Simple_repeat |
| scaffold11742 |
51812 |
52118 |
+ |
RS96 |
Unspecified |
| scaffold11742 |
52757 |
52815 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold11742 |
53350 |
53410 |
+ |
(TTATTA)n |
Simple_repeat |
| scaffold11742 |
53475 |
53855 |
- |
RS29 |
Unspecified |
| scaffold11742 |
54402 |
54447 |
+ |
(GTCCCAC)n |
Simple_repeat |
| scaffold11742 |
55583 |
55650 |
+ |
(TTGAAT)n |
Simple_repeat |
| scaffold11742 |
55640 |
55678 |
+ |
(TGTT)n |
Simple_repeat |
| scaffold11742 |
56426 |
56511 |
+ |
RS7678 |
Unspecified |
| scaffold11742 |
56510 |
56690 |
+ |
RS5 |
Unspecified |
| scaffold11742 |
56918 |
57214 |
+ |
RS1746 |
Unspecified |
| scaffold11742 |
56986 |
57269 |
- |
RS1746 |
Unspecified |
| scaffold11742 |
58087 |
58371 |
- |
RS1095 |
Unspecified |
| scaffold11742 |
58937 |
58969 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
59078 |
59260 |
+ |
RS2386 |
Unspecified |
| scaffold11742 |
59787 |
59822 |
+ |
(TCTTCG)n |
Simple_repeat |
| scaffold11742 |
60320 |
60383 |
+ |
(CCTTGCG)n |
Simple_repeat |
| scaffold11742 |
61689 |
61869 |
- |
RS453 |
Unspecified |
| scaffold11742 |
68264 |
68324 |
+ |
(AAGTAA)n |
Simple_repeat |
| scaffold11742 |
68378 |
68400 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
70286 |
70316 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold11742 |
70363 |
70452 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold11742 |
70458 |
70499 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
70731 |
70812 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold11742 |
70949 |
70971 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
71150 |
71183 |
+ |
(CT)n |
Simple_repeat |
| scaffold11742 |
71252 |
71292 |
+ |
(TATTTAT)n |
Simple_repeat |
| scaffold11742 |
72675 |
72825 |
+ |
RS17662 |
Unspecified |
| scaffold11742 |
73904 |
73971 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold11742 |
74478 |
74499 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
74550 |
74592 |
+ |
GA-rich |
Low_complexity |
| scaffold11742 |
75835 |
76041 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold11742 |
79109 |
79147 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
79800 |
79960 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold11742 |
80028 |
80074 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
80240 |
80368 |
+ |
(CCCGAA)n |
Simple_repeat |
| scaffold11742 |
81148 |
81262 |
+ |
RS14888 |
Unspecified |
| scaffold11742 |
81265 |
81507 |
- |
RS4 |
Unspecified |
| scaffold11742 |
81595 |
81622 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold11742 |
81740 |
81953 |
+ |
RS209 |
Unspecified |
| scaffold11742 |
83259 |
83362 |
- |
PL754 |
Unspecified |
| scaffold11742 |
88984 |
89013 |
+ |
RS3984 |
Unspecified |
| scaffold11742 |
89052 |
89100 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
89773 |
89815 |
+ |
(GATAA)n |
Simple_repeat |
| scaffold11742 |
89905 |
90110 |
- |
RS28 |
Unspecified |
| scaffold11742 |
93170 |
93710 |
- |
PL753 |
Unspecified |
| scaffold11742 |
94167 |
94349 |
- |
RS5 |
Unspecified |
| scaffold11742 |
95218 |
95282 |
+ |
(ATGATTT)n |
Simple_repeat |
| scaffold11742 |
95379 |
95430 |
+ |
(AAGTTTTCTG)n |
Simple_repeat |
| scaffold11742 |
100039 |
100075 |
+ |
(ACA)n |
Simple_repeat |
| scaffold11742 |
100466 |
100514 |
+ |
(AATTCAT)n |
Simple_repeat |
| scaffold11742 |
100778 |
100830 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
101086 |
101116 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
101699 |
101882 |
+ |
RS2827 |
Unspecified |
| scaffold11742 |
103414 |
103607 |
+ |
RS1220 |
Unspecified |
| scaffold11742 |
103798 |
103846 |
+ |
(TAT)n |
Simple_repeat |
| scaffold11742 |
103878 |
103908 |
+ |
(ACTGA)n |
Simple_repeat |
| scaffold11742 |
104314 |
104340 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
104431 |
104449 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
104648 |
104917 |
+ |
RS1 |
Unspecified |
| scaffold11742 |
105279 |
105322 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
105330 |
105581 |
- |
RS18111 |
Unspecified |
| scaffold11742 |
107122 |
107175 |
+ |
(AATCA)n |
Simple_repeat |
| scaffold11742 |
107605 |
107639 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
107728 |
107768 |
+ |
(TAATTAA)n |
Simple_repeat |
| scaffold11742 |
108449 |
108475 |
+ |
GA-rich |
Low_complexity |
| scaffold11742 |
108477 |
108499 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
108500 |
108506 |
+ |
(GAAAA)n |
Simple_repeat |
| scaffold11742 |
108755 |
108845 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold11742 |
109636 |
109819 |
- |
RS178 |
Unspecified |
| scaffold11742 |
109856 |
109873 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
110745 |
110851 |
- |
RS640 |
Unspecified |
| scaffold11742 |
111187 |
111222 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
111377 |
111405 |
+ |
(TTACTAA)n |
Simple_repeat |
| scaffold11742 |
111407 |
111439 |
+ |
(TATT)n |
Simple_repeat |
| scaffold11742 |
112152 |
112233 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
113602 |
113646 |
+ |
(CGGTT)n |
Simple_repeat |
| scaffold11742 |
114258 |
114299 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
115191 |
115230 |
+ |
RS2374 |
Unspecified |
| scaffold11742 |
115282 |
115354 |
+ |
(ATGT)n |
Simple_repeat |
| scaffold11742 |
115415 |
116998 |
- |
Copia28-VV_I-int |
LTR/Copia |
| scaffold11742 |
117341 |
118233 |
- |
Copia28-VV_I-int |
LTR/Copia |
| scaffold11742 |
118384 |
118743 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold11742 |
118508 |
118742 |
- |
Copia28-VV_I-int |
LTR/Copia |
| scaffold11742 |
119062 |
119823 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold11742 |
119225 |
119346 |
- |
Copia28-VV_I-int |
LTR/Copia |
| scaffold11742 |
120108 |
120135 |
+ |
(ATG)n |
Simple_repeat |
| scaffold11742 |
120202 |
120246 |
+ |
(ATGT)n |
Simple_repeat |
| scaffold11742 |
121841 |
121901 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
122326 |
122398 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold11742 |
123025 |
123069 |
+ |
(TAT)n |
Simple_repeat |
| scaffold11742 |
128255 |
128329 |
+ |
GA-rich |
Low_complexity |
| scaffold11742 |
128552 |
128612 |
+ |
(GGT)n |
Simple_repeat |
| scaffold11742 |
129164 |
129693 |
- |
PL753 |
Unspecified |
| scaffold11742 |
131668 |
131718 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
132473 |
132651 |
- |
RS163 |
Unspecified |
| scaffold11742 |
132719 |
132815 |
- |
RS4475 |
Unspecified |
| scaffold11742 |
133757 |
133927 |
+ |
RS573 |
Unspecified |
| scaffold11742 |
134673 |
134753 |
+ |
(GGC)n |
Simple_repeat |
| scaffold11742 |
134754 |
134765 |
+ |
(GGTGGC)n |
Simple_repeat |
| scaffold11742 |
136311 |
136341 |
+ |
(TCATTT)n |
Simple_repeat |
| scaffold11742 |
136895 |
136920 |
+ |
(TAATTA)n |
Simple_repeat |
| scaffold11742 |
136921 |
136945 |
+ |
(TAA)n |
Simple_repeat |
| scaffold11742 |
136966 |
137260 |
+ |
RS384 |
Unspecified |
| scaffold11742 |
137259 |
138284 |
+ |
PL563 |
Unspecified |
| scaffold11742 |
138346 |
138414 |
- |
RS1699 |
Unspecified |
| scaffold11742 |
138695 |
138763 |
+ |
GA-rich |
Low_complexity |
| scaffold11742 |
138783 |
138804 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
138807 |
138869 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold11742 |
139250 |
139280 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold11742 |
139612 |
139641 |
+ |
(TTAGG)n |
Simple_repeat |
| scaffold11742 |
145850 |
145933 |
- |
RS972 |
Unspecified |
| scaffold11742 |
146724 |
146750 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
146771 |
146804 |
+ |
(TAATCAA)n |
Simple_repeat |
| scaffold11742 |
147276 |
147489 |
- |
PL288 |
Unspecified |
| scaffold11742 |
147770 |
147814 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
148255 |
148743 |
+ |
RS1240 |
Unspecified |
| scaffold11742 |
148995 |
149149 |
+ |
RS18111 |
Unspecified |
| scaffold11742 |
150173 |
150228 |
+ |
(ATTC)n |
Simple_repeat |
| scaffold11742 |
150902 |
151063 |
+ |
RS133 |
Unspecified |
| scaffold11742 |
150929 |
151096 |
- |
RS18071 |
Unspecified |
| scaffold11742 |
151266 |
151526 |
- |
RS365 |
Unspecified |
| scaffold11742 |
151612 |
151806 |
- |
RS11846 |
Unspecified |
| scaffold11742 |
151827 |
151945 |
- |
RS13929 |
Unspecified |
| scaffold11742 |
151839 |
151932 |
+ |
RS16382 |
Unspecified |
| scaffold11742 |
151954 |
152226 |
+ |
RS586 |
Unspecified |
| scaffold11742 |
152646 |
152694 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
153406 |
153453 |
+ |
G-rich |
Low_complexity |
| scaffold11742 |
153588 |
153618 |
+ |
(TTGGGC)n |
Simple_repeat |
| scaffold11742 |
153748 |
153772 |
+ |
(ATT)n |
Simple_repeat |
| scaffold11742 |
153976 |
153997 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
154237 |
154265 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
154321 |
154417 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold11742 |
154947 |
155313 |
- |
RS614 |
Unspecified |
| scaffold11742 |
155315 |
155417 |
+ |
RS84 |
Unspecified |
| scaffold11742 |
156098 |
156146 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold11742 |
156472 |
156563 |
+ |
RS4475 |
Unspecified |
| scaffold11742 |
157093 |
157291 |
- |
PL560 |
Unspecified |
| scaffold11742 |
157841 |
157892 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold11742 |
158471 |
158521 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
159279 |
159378 |
+ |
RS4475 |
Unspecified |
| scaffold11742 |
159286 |
159369 |
+ |
RS93 |
Unspecified |
| scaffold11742 |
160085 |
160452 |
+ |
RS8 |
Unspecified |
| scaffold11742 |
160676 |
160728 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold11742 |
160772 |
160894 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold11742 |
161233 |
161258 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
162214 |
162251 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
162407 |
162438 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold11742 |
162657 |
162693 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
162827 |
163145 |
- |
RS8 |
Unspecified |
| scaffold11742 |
164257 |
164287 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
164288 |
164303 |
+ |
(ATCAA)n |
Simple_repeat |
| scaffold11742 |
165238 |
165276 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
165277 |
165289 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
165424 |
165497 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
167468 |
167522 |
+ |
(ATTAAT)n |
Simple_repeat |
| scaffold11742 |
167749 |
167807 |
+ |
(TAA)n |
Simple_repeat |
| scaffold11742 |
170025 |
170239 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold11742 |
170240 |
170311 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold11742 |
172083 |
172148 |
+ |
(GTTAATT)n |
Simple_repeat |
| scaffold11742 |
172739 |
172767 |
+ |
(GTT)n |
Simple_repeat |
| scaffold11742 |
176144 |
176206 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold11742 |
177474 |
177500 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
177555 |
177582 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold11742 |
178026 |
178256 |
+ |
RS18 |
Unspecified |
| scaffold11742 |
178555 |
178712 |
+ |
RS55 |
Unspecified |
| scaffold11742 |
178578 |
178943 |
+ |
RS600 |
Unspecified |
| scaffold11742 |
179180 |
179255 |
+ |
(TTCTGAAGTT)n |
Simple_repeat |
| scaffold11742 |
179258 |
179308 |
+ |
(TAT)n |
Simple_repeat |
| scaffold11742 |
179715 |
179795 |
- |
RS1323 |
Unspecified |
| scaffold11742 |
179765 |
179830 |
- |
RS5732 |
Unspecified |
| scaffold11742 |
180281 |
180319 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold11742 |
180696 |
180774 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
181306 |
181383 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
182355 |
182783 |
- |
RS2817 |
Unspecified |
| scaffold11742 |
182844 |
184936 |
+ |
Copia-2_SL-I |
LTR/Copia |
| scaffold11742 |
185090 |
185120 |
+ |
GA-rich |
Low_complexity |
| scaffold11742 |
185211 |
186822 |
+ |
Copia-2_SL-I |
LTR/Copia |
| scaffold11742 |
187080 |
187508 |
- |
RS2817 |
Unspecified |
| scaffold11742 |
187546 |
187576 |
+ |
(TCAC)n |
Simple_repeat |
| scaffold11742 |
188530 |
188593 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold11742 |
188618 |
188682 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold11742 |
189108 |
189309 |
- |
PL622 |
Unspecified |
| scaffold11742 |
190377 |
190405 |
+ |
(TCAT)n |
Simple_repeat |
| scaffold11742 |
194978 |
194994 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
195361 |
195392 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
195518 |
195691 |
- |
RS4 |
Unspecified |
| scaffold11742 |
195598 |
195712 |
- |
RS6841 |
Unspecified |
| scaffold11742 |
196327 |
196356 |
+ |
(CGA)n |
Simple_repeat |
| scaffold11742 |
198885 |
199049 |
+ |
Copia-33_GM-I |
LTR |
| scaffold11742 |
200221 |
200243 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
200656 |
200790 |
+ |
Copia-33_GM-I |
LTR |
| scaffold11742 |
202318 |
202523 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold11742 |
202670 |
202858 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold11742 |
202917 |
202956 |
- |
RS17699 |
Unspecified |
| scaffold11742 |
202922 |
203181 |
- |
RS1 |
Unspecified |
| scaffold11742 |
203246 |
203314 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold11742 |
204703 |
204738 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
205278 |
205314 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold11742 |
205933 |
206131 |
+ |
RS2452 |
Unspecified |
| scaffold11742 |
206177 |
206200 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
206697 |
206728 |
+ |
(GAT)n |
Simple_repeat |
| scaffold11742 |
207334 |
207396 |
+ |
(ATGTG)n |
Simple_repeat |
| scaffold11742 |
208392 |
208421 |
+ |
(GGTA)n |
Simple_repeat |
| scaffold11742 |
210716 |
210888 |
- |
PL469 |
Unspecified |
| scaffold11742 |
211865 |
211898 |
+ |
(TTTTAG)n |
Simple_repeat |
| scaffold11742 |
211944 |
212038 |
- |
PL171 |
Unspecified |
| scaffold11742 |
212066 |
212129 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
212213 |
212278 |
+ |
(TTCT)n |
Simple_repeat |
| scaffold11742 |
212279 |
212291 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold11742 |
214193 |
214251 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold11742 |
215635 |
215677 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold11742 |
216397 |
216415 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
217615 |
217675 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold11742 |
218442 |
218667 |
+ |
RS11770 |
Unspecified |
| scaffold11742 |
218882 |
218907 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
219611 |
219701 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
219936 |
219978 |
- |
RTE-1_PD |
LINE/RTE-BovB |
| scaffold11742 |
220969 |
221194 |
+ |
RS11770 |
Unspecified |
| scaffold11742 |
221550 |
221585 |
+ |
(TTTCTGT)n |
Simple_repeat |
| scaffold11742 |
222067 |
222113 |
+ |
(TTATAAT)n |
Simple_repeat |
| scaffold11742 |
222177 |
222217 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
223269 |
223494 |
+ |
RS11770 |
Unspecified |
| scaffold11742 |
223868 |
223897 |
+ |
(TTA)n |
Simple_repeat |
| scaffold11742 |
223992 |
224068 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
224318 |
224351 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
225438 |
225630 |
+ |
RS11770 |
Unspecified |
| scaffold11742 |
225991 |
226351 |
+ |
G-rich |
Low_complexity |
| scaffold11742 |
226297 |
226351 |
+ |
G-rich |
Low_complexity |
| scaffold11742 |
226397 |
226454 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
226626 |
226728 |
+ |
(ACC)n |
Simple_repeat |
| scaffold11742 |
226748 |
226881 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
227285 |
227307 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
233168 |
233192 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
234065 |
234107 |
+ |
(TAA)n |
Simple_repeat |
| scaffold11742 |
236150 |
236179 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
236263 |
236308 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
237178 |
237220 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
238622 |
238659 |
+ |
(GAT)n |
Simple_repeat |
| scaffold11742 |
238710 |
238740 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold11742 |
239172 |
239191 |
+ |
(TTA)n |
Simple_repeat |
| scaffold11742 |
240471 |
240567 |
- |
L1-26_CPa |
LINE/L1 |
| scaffold11742 |
240793 |
241060 |
- |
SHALINE5_MT |
LINE/L1 |
| scaffold11742 |
244605 |
244750 |
+ |
RS9535 |
Unspecified |
| scaffold11742 |
244818 |
245277 |
+ |
RS17659 |
Unspecified |
| scaffold11742 |
247199 |
247244 |
+ |
(ACA)n |
Simple_repeat |
| scaffold11742 |
250525 |
250564 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold11742 |
250567 |
250606 |
+ |
(AATT)n |
Simple_repeat |
| scaffold11742 |
252373 |
252454 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
252373 |
252525 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
252444 |
252525 |
- |
RS5454 |
Unspecified |
| scaffold11742 |
252617 |
252661 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
253837 |
253868 |
+ |
(CCGGC)n |
Simple_repeat |
| scaffold11742 |
254010 |
254075 |
- |
RS188 |
Unspecified |
| scaffold11742 |
254360 |
254390 |
+ |
(TCA)n |
Simple_repeat |
| scaffold11742 |
254396 |
254418 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
254436 |
254459 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
254812 |
254837 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold11742 |
258798 |
258833 |
+ |
(ACATTAA)n |
Simple_repeat |
| scaffold11742 |
259331 |
259365 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
259532 |
259548 |
+ |
(TCT)n |
Simple_repeat |
| scaffold11742 |
262833 |
262948 |
- |
RS782 |
Unspecified |
| scaffold11742 |
263350 |
263406 |
+ |
(TTG)n |
Simple_repeat |
| scaffold11742 |
263563 |
263581 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
263845 |
264009 |
+ |
RS4 |
Unspecified |
| scaffold11742 |
267162 |
267202 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
267324 |
267388 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
267956 |
267976 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
269084 |
269120 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
269857 |
269918 |
- |
RTE-1_PD |
LINE/RTE-BovB |
| scaffold11742 |
272302 |
272456 |
- |
RS79 |
Unspecified |
| scaffold11742 |
272471 |
272556 |
- |
RS4475 |
Unspecified |
| scaffold11742 |
272849 |
272929 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold11742 |
274690 |
274734 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
275148 |
275189 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
275430 |
275469 |
+ |
(TTA)n |
Simple_repeat |
| scaffold11742 |
275838 |
276088 |
- |
RS4 |
Unspecified |
| scaffold11742 |
276123 |
276176 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold11742 |
277630 |
277663 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
278446 |
278591 |
- |
RS115 |
Unspecified |
| scaffold11742 |
278668 |
278701 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
279088 |
279122 |
+ |
(GCG)n |
Simple_repeat |
| scaffold11742 |
279220 |
279236 |
+ |
(ATA)n |
Simple_repeat |
| scaffold11742 |
279399 |
279430 |
+ |
(GATAAG)n |
Simple_repeat |
| scaffold11742 |
279492 |
279526 |
+ |
(GGT)n |
Simple_repeat |
| scaffold11742 |
280496 |
280532 |
+ |
(ATTTC)n |
Simple_repeat |
| scaffold11742 |
281846 |
281895 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold11742 |
283239 |
283451 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold11742 |
283452 |
283515 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold11742 |
283821 |
283849 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
287028 |
287044 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
287442 |
287501 |
- |
RS2386 |
Unspecified |
| scaffold11742 |
287543 |
287608 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
287670 |
287770 |
+ |
RS452 |
Unspecified |
| scaffold11742 |
287697 |
287770 |
+ |
RS181 |
Unspecified |
| scaffold11742 |
287824 |
287856 |
+ |
(CACTTT)n |
Simple_repeat |
| scaffold11742 |
287879 |
287899 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
288114 |
288151 |
+ |
(TTA)n |
Simple_repeat |
| scaffold11742 |
288303 |
288345 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold11742 |
289821 |
289892 |
+ |
SINE2-1_PD |
SINE/tRNA-RTE |
| scaffold11742 |
293273 |
293326 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
293406 |
293433 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
294040 |
294089 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold11742 |
294511 |
294527 |
+ |
(A)n |
Simple_repeat |
| scaffold11742 |
294837 |
294867 |
+ |
(T)n |
Simple_repeat |
| scaffold11742 |
295357 |
295482 |
- |
RS15697 |
Unspecified |
| scaffold11742 |
296039 |
296124 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold11742 |
296271 |
296298 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold11742 |
296363 |
296452 |
- |
RS5 |
Unspecified |
| scaffold11742 |
297409 |
297617 |
+ |
Copia-33_GM-I |
LTR |
| scaffold11742 |
297952 |
297982 |
+ |
A-rich |
Low_complexity |
| scaffold11742 |
298322 |
298376 |
- |
RS1874 |
Unspecified |
| scaffold11742 |
301026 |
301071 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold11742 |
301373 |
301560 |
- |
RS10121 |
Unspecified |
| scaffold11742 |
301771 |
301940 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold11742 |
301969 |
301993 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold11742 |
302795 |
302894 |
- |
RS5740 |
Unspecified |
| scaffold11742 |
303329 |
303448 |
- |
RS12616 |
Unspecified |