scaffold11900 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold11900 |
142 |
1158 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold11900 |
144 |
1157 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold11900 |
4154 |
4949 |
- |
PL834 |
Unspecified |
| scaffold11900 |
5679 |
5985 |
- |
RS595 |
Unspecified |
| scaffold11900 |
5855 |
6192 |
- |
RS595 |
Unspecified |
| scaffold11900 |
6064 |
6271 |
- |
RS595 |
Unspecified |
| scaffold11900 |
6240 |
6280 |
- |
RS12063 |
Unspecified |
| scaffold11900 |
6269 |
6511 |
+ |
RS145 |
Unspecified |
| scaffold11900 |
6526 |
6737 |
+ |
RS2863 |
Unspecified |
| scaffold11900 |
6607 |
7216 |
+ |
PL877 |
Unspecified |
| scaffold11900 |
6959 |
7033 |
+ |
A-rich |
Low_complexity |
| scaffold11900 |
7124 |
7201 |
+ |
(GGCGGTG)n |
Simple_repeat |
| scaffold11900 |
7523 |
7824 |
- |
PL688 |
Unspecified |
| scaffold11900 |
8012 |
8048 |
+ |
(TAAATA)n |
Simple_repeat |
| scaffold11900 |
8333 |
8600 |
+ |
RS1 |
Unspecified |
| scaffold11900 |
8877 |
9276 |
+ |
RS29 |
Unspecified |
| scaffold11900 |
9283 |
9526 |
- |
RS4 |
Unspecified |
| scaffold11900 |
9284 |
9609 |
- |
RS15470 |
Unspecified |
| scaffold11900 |
9671 |
9725 |
+ |
(ATAGTTA)n |
Simple_repeat |
| scaffold11900 |
9707 |
9771 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold11900 |
10459 |
10490 |
+ |
(ATAG)n |
Simple_repeat |
| scaffold11900 |
10682 |
10738 |
+ |
(ATCTTTTT)n |
Simple_repeat |
| scaffold11900 |
10796 |
10886 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold11900 |
11102 |
11127 |
+ |
A-rich |
Low_complexity |
| scaffold11900 |
11128 |
11171 |
+ |
(AATC)n |
Simple_repeat |
| scaffold11900 |
11244 |
11303 |
+ |
(TCT)n |
Simple_repeat |
| scaffold11900 |
11306 |
11331 |
+ |
(TTCAA)n |
Simple_repeat |
| scaffold11900 |
12388 |
12417 |
+ |
(T)n |
Simple_repeat |
| scaffold11900 |
20724 |
20758 |
+ |
(T)n |
Simple_repeat |
| scaffold11900 |
21661 |
21848 |
+ |
RS15408 |
Unspecified |
| scaffold11900 |
22016 |
22540 |
+ |
RS16117 |
Unspecified |
| scaffold11900 |
22894 |
23131 |
- |
RS6506 |
Unspecified |
| scaffold11900 |
23471 |
23525 |
+ |
(CAC)n |
Simple_repeat |
| scaffold11900 |
24208 |
24229 |
+ |
(T)n |
Simple_repeat |
| scaffold11900 |
24903 |
24922 |
+ |
(T)n |
Simple_repeat |
| scaffold11900 |
28204 |
28391 |
+ |
RS15408 |
Unspecified |
| scaffold11900 |
28559 |
29083 |
+ |
RS16117 |
Unspecified |
| scaffold11900 |
30348 |
30384 |
+ |
(AGGATG)n |
Simple_repeat |
| scaffold11900 |
30873 |
31154 |
- |
RS42 |
Unspecified |
| scaffold11900 |
31191 |
31264 |
+ |
(TTAATAT)n |
Simple_repeat |
| scaffold11900 |
31900 |
32394 |
- |
PL489 |
Unspecified |
| scaffold11900 |
35413 |
35940 |
- |
RS2911 |
Unspecified |
| scaffold11900 |
35633 |
36024 |
- |
RS247 |
Unspecified |
| scaffold11900 |
36115 |
36144 |
+ |
(A)n |
Simple_repeat |
| scaffold11900 |
36873 |
36902 |
+ |
(GTT)n |
Simple_repeat |
| scaffold11900 |
36967 |
37190 |
+ |
RS4398 |
Unspecified |
| scaffold11900 |
37076 |
37423 |
- |
RS1740 |
Unspecified |
| scaffold11900 |
38122 |
38156 |
+ |
A-rich |
Low_complexity |
| scaffold11900 |
41576 |
41610 |
+ |
(TTTTGG)n |
Simple_repeat |
| scaffold11900 |
44191 |
44782 |
+ |
RS4224 |
Unspecified |
| scaffold11900 |
45101 |
45177 |
- |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold11900 |
45231 |
45260 |
+ |
(T)n |
Simple_repeat |
| scaffold11900 |
45356 |
46340 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold11900 |
46759 |
48558 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold11900 |
46804 |
48531 |
- |
Gypsy-133_GM-I |
LTR/Gypsy |
| scaffold11900 |
48983 |
49666 |
+ |
RS5742 |
Unspecified |
| scaffold11900 |
53558 |
54523 |
- |
PL808 |
Unspecified |
| scaffold11900 |
54713 |
54740 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold11900 |
54829 |
55285 |
+ |
(TTCGCGT)n |
Simple_repeat |
| scaffold11900 |
54829 |
54865 |
+ |
(TTCGCGT)n |
Simple_repeat |
| scaffold11900 |
54849 |
55285 |
+ |
PL176 |
Unspecified |
| scaffold11900 |
55297 |
55378 |
+ |
(TTTCT)n |
Simple_repeat |
| scaffold11900 |
56065 |
56100 |
+ |
(GTATTTT)n |
Simple_repeat |
| scaffold11900 |
56114 |
56156 |
+ |
A-rich |
Low_complexity |
| scaffold11900 |
57187 |
57767 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold11900 |
60837 |
60871 |
+ |
(TTTTGG)n |
Simple_repeat |
| scaffold11900 |
61349 |
61655 |
+ |
RS709 |
Unspecified |
| scaffold11900 |
63621 |
64212 |
+ |
RS4224 |
Unspecified |