scaffold11913 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold11913 |
158 |
821 |
+ |
RS3318 |
Unspecified |
| scaffold11913 |
910 |
951 |
- |
Copia-10_TC-I |
LTR/Copia |
| scaffold11913 |
1285 |
1309 |
+ |
(T)n |
Simple_repeat |
| scaffold11913 |
1410 |
1441 |
+ |
(T)n |
Simple_repeat |
| scaffold11913 |
1491 |
1732 |
- |
RS4 |
Unspecified |
| scaffold11913 |
1795 |
1936 |
+ |
RS22 |
Unspecified |
| scaffold11913 |
1905 |
1941 |
+ |
RS18405 |
Unspecified |
| scaffold11913 |
2109 |
2151 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold11913 |
2321 |
2342 |
+ |
(TAA)n |
Simple_repeat |
| scaffold11913 |
2699 |
2876 |
- |
RS582 |
Unspecified |
| scaffold11913 |
2881 |
2936 |
+ |
SINE2-1_STu |
SINE/tRNA |
| scaffold11913 |
4811 |
4878 |
- |
RS18111 |
Unspecified |
| scaffold11913 |
6405 |
6437 |
+ |
(T)n |
Simple_repeat |
| scaffold11913 |
6796 |
6991 |
+ |
(TCGTG)n |
Simple_repeat |
| scaffold11913 |
7377 |
7481 |
+ |
RS35 |
Unspecified |
| scaffold11913 |
7964 |
8230 |
+ |
RS1221 |
Unspecified |
| scaffold11913 |
8175 |
8418 |
- |
RS5644 |
Unspecified |
| scaffold11913 |
8508 |
8614 |
+ |
RS3491 |
Unspecified |
| scaffold11913 |
9380 |
9623 |
- |
RS5644 |
Unspecified |
| scaffold11913 |
10037 |
10224 |
- |
RS1221 |
Unspecified |
| scaffold11913 |
10620 |
10655 |
+ |
A-rich |
Low_complexity |
| scaffold11913 |
12086 |
12119 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold11913 |
12205 |
12232 |
+ |
(T)n |
Simple_repeat |
| scaffold11913 |
12283 |
12306 |
+ |
(T)n |
Simple_repeat |
| scaffold11913 |
13806 |
13960 |
- |
ATLINE1A |
LINE/L1 |
| scaffold11913 |
14256 |
15147 |
- |
L1-1_EPa |
LINE/L1 |
| scaffold11913 |
15386 |
15451 |
- |
SHALINE8_MT |
LINE/L1 |
| scaffold11913 |
16594 |
16620 |
+ |
(A)n |
Simple_repeat |
| scaffold11913 |
17425 |
17556 |
+ |
RS11742 |
Unspecified |
| scaffold11913 |
18478 |
18550 |
- |
RS18111 |
Unspecified |
| scaffold11913 |
20433 |
20489 |
+ |
(TGTCG)n |
Simple_repeat |
| scaffold11913 |
20629 |
20731 |
+ |
PL46 |
Unspecified |
| scaffold11913 |
20640 |
20969 |
+ |
PL201 |
Unspecified |
| scaffold11913 |
20640 |
20907 |
- |
PL375 |
Unspecified |
| scaffold11913 |
20970 |
21145 |
+ |
RS1676 |
Unspecified |
| scaffold11913 |
21152 |
21204 |
+ |
(GGT)n |
Simple_repeat |
| scaffold11913 |
21234 |
21269 |
+ |
A-rich |
Low_complexity |
| scaffold11913 |
21327 |
21375 |
- |
PL201 |
Unspecified |
| scaffold11913 |
21522 |
21585 |
+ |
(T)n |
Simple_repeat |
| scaffold11913 |
21603 |
21636 |
+ |
(T)n |
Simple_repeat |
| scaffold11913 |
21663 |
21752 |
+ |
RS35 |
Unspecified |
| scaffold11913 |
21883 |
21918 |
+ |
(ACATTAA)n |
Simple_repeat |
| scaffold11913 |
23319 |
23349 |
+ |
(T)n |
Simple_repeat |
| scaffold11913 |
23952 |
23990 |
+ |
(TATTTTA)n |
Simple_repeat |
| scaffold11913 |
24874 |
25007 |
+ |
RS6819 |
Unspecified |
| scaffold11913 |
25742 |
25860 |
- |
RS6485 |
Unspecified |
| scaffold11913 |
26523 |
26565 |
+ |
A-rich |
Low_complexity |
| scaffold11913 |
26991 |
27039 |
+ |
G-rich |
Low_complexity |
| scaffold11913 |
26991 |
27181 |
+ |
G-rich |
Low_complexity |
| scaffold11913 |
27019 |
27181 |
+ |
RS15891 |
Unspecified |
| scaffold11913 |
27052 |
27198 |
+ |
RS12866 |
Unspecified |
| scaffold11913 |
27415 |
27474 |
+ |
(AATT)n |
Simple_repeat |
| scaffold11913 |
27856 |
27886 |
+ |
(AATA)n |
Simple_repeat |
| scaffold11913 |
28250 |
28381 |
+ |
RS11742 |
Unspecified |
| scaffold11913 |
32111 |
32148 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold11913 |
32694 |
32770 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold11913 |
32795 |
32835 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold11913 |
33011 |
33219 |
- |
RS1 |
Unspecified |
| scaffold11913 |
33344 |
33450 |
+ |
RS84 |
Unspecified |
| scaffold11913 |
33658 |
33676 |
+ |
(A)n |
Simple_repeat |
| scaffold11913 |
33916 |
33933 |
+ |
(GAG)n |
Simple_repeat |
| scaffold11913 |
34172 |
34269 |
- |
RS18 |
Unspecified |
| scaffold11913 |
34420 |
34635 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold11913 |
34420 |
34710 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold11913 |
34611 |
34710 |
- |
RS18111 |
Unspecified |
| scaffold11913 |
35037 |
35060 |
+ |
(A)n |
Simple_repeat |
| scaffold11913 |
35321 |
35353 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold11913 |
35464 |
35621 |
+ |
PL699 |
Unspecified |
| scaffold11913 |
35594 |
35664 |
+ |
PL699 |
Unspecified |
| scaffold11913 |
35714 |
35764 |
+ |
(GGT)n |
Simple_repeat |
| scaffold11913 |
36502 |
36527 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold11913 |
37219 |
37488 |
+ |
RS10 |
Unspecified |
| scaffold11913 |
39141 |
39178 |
+ |
RS1647 |
Unspecified |
| scaffold11913 |
39592 |
39608 |
+ |
(T)n |
Simple_repeat |
| scaffold11913 |
39801 |
39837 |
+ |
GA-rich |
Low_complexity |
| scaffold11913 |
39942 |
40024 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold11913 |
39992 |
40028 |
+ |
GA-rich |
Low_complexity |
| scaffold11913 |
40133 |
40215 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold11913 |
40183 |
40216 |
+ |
GA-rich |
Low_complexity |
| scaffold11913 |
40220 |
40241 |
+ |
(T)n |
Simple_repeat |
| scaffold11913 |
40457 |
40630 |
- |
RS4875 |
Unspecified |
| scaffold11913 |
40654 |
40695 |
+ |
A-rich |
Low_complexity |
| scaffold11913 |
43817 |
43864 |
+ |
(CAC)n |
Simple_repeat |
| scaffold11913 |
45938 |
46056 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold11913 |
46203 |
46389 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold11913 |
46509 |
46538 |
+ |
(AAT)n |
Simple_repeat |
| scaffold11913 |
46923 |
46947 |
+ |
(A)n |
Simple_repeat |
| scaffold11913 |
47510 |
47538 |
+ |
(CGGGTT)n |
Simple_repeat |
| scaffold11913 |
47539 |
47617 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold11913 |
48061 |
48090 |
+ |
G-rich |
Low_complexity |
| scaffold11913 |
48350 |
48401 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold11913 |
49103 |
49119 |
+ |
(A)n |
Simple_repeat |
| scaffold11913 |
49838 |
49854 |
+ |
(T)n |
Simple_repeat |
| scaffold11913 |
50864 |
50894 |
+ |
(TA)n |
Simple_repeat |
| scaffold11913 |
51319 |
51466 |
- |
RS458 |
Unspecified |
| scaffold11913 |
52285 |
52346 |
+ |
A-rich |
Low_complexity |
| scaffold11913 |
52637 |
52724 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold11913 |
52910 |
52967 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold11913 |
52968 |
53001 |
+ |
A-rich |
Low_complexity |
| scaffold11913 |
53948 |
54007 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold11913 |
54357 |
54380 |
+ |
(A)n |
Simple_repeat |
| scaffold11913 |
54403 |
54426 |
+ |
(A)n |
Simple_repeat |
| scaffold11913 |
54833 |
55089 |
+ |
RS1 |
Unspecified |
| scaffold11913 |
55959 |
56047 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold11913 |
56893 |
57034 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold11913 |
57236 |
57478 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold11913 |
58500 |
58535 |
+ |
A-rich |
Low_complexity |
| scaffold11913 |
59153 |
59159 |
+ |
(TTCT)n |
Simple_repeat |
| scaffold11913 |
59160 |
59184 |
+ |
(T)n |
Simple_repeat |
| scaffold11913 |
59185 |
59207 |
+ |
(TTCT)n |
Simple_repeat |
| scaffold11913 |
59354 |
59540 |
+ |
RS79 |
Unspecified |
| scaffold11913 |
60677 |
60773 |
+ |
RS16382 |
Unspecified |
| scaffold11913 |
61723 |
61767 |
+ |
(TT)n |
Simple_repeat |
| scaffold11913 |
61938 |
62119 |
+ |
RS79 |
Unspecified |
| scaffold11913 |
63259 |
63355 |
+ |
RS16382 |
Unspecified |
| scaffold11913 |
63987 |
64022 |
+ |
(TAAAA)n |
Simple_repeat |
| scaffold11913 |
64246 |
64339 |
+ |
RS13929 |
Unspecified |
| scaffold11913 |
64443 |
64464 |
+ |
(A)n |
Simple_repeat |
| scaffold11913 |
64785 |
64824 |
+ |
A-rich |
Low_complexity |
| scaffold11913 |
64964 |
65004 |
+ |
A-rich |
Low_complexity |
| scaffold11913 |
66104 |
66140 |
+ |
A-rich |
Low_complexity |
| scaffold11913 |
66507 |
66608 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold11913 |
66650 |
66706 |
+ |
(AAT)n |
Simple_repeat |
| scaffold11913 |
67901 |
67943 |
+ |
(TAT)n |
Simple_repeat |
| scaffold11913 |
68222 |
68242 |
+ |
(A)n |
Simple_repeat |
| scaffold11913 |
69186 |
69396 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold11913 |
69486 |
69576 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold11913 |
69729 |
69948 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold11913 |
70460 |
70578 |
- |
PL194 |
Unspecified |
| scaffold11913 |
70475 |
70578 |
+ |
PL796 |
Unspecified |
| scaffold11913 |
70490 |
70579 |
- |
PL766 |
Unspecified |
| scaffold11913 |
70504 |
70577 |
+ |
RS2288 |
Unspecified |
| scaffold11913 |
70605 |
70636 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold11913 |
70851 |
70901 |
+ |
(ATAAT)n |
Simple_repeat |