scaffold12024 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold12024 |
1 |
334 |
- |
RS158 |
Unspecified |
| scaffold12024 |
715 |
1275 |
+ |
RS1275 |
Unspecified |
| scaffold12024 |
1627 |
1652 |
+ |
(T)n |
Simple_repeat |
| scaffold12024 |
1714 |
1739 |
+ |
(T)n |
Simple_repeat |
| scaffold12024 |
1839 |
2154 |
+ |
RS57 |
Unspecified |
| scaffold12024 |
2223 |
2503 |
- |
PL578 |
Unspecified |
| scaffold12024 |
2270 |
2953 |
- |
PL889 |
Unspecified |
| scaffold12024 |
2581 |
3437 |
+ |
RS57 |
Unspecified |
| scaffold12024 |
3039 |
3498 |
- |
RS403 |
Unspecified |
| scaffold12024 |
4234 |
4260 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold12024 |
4318 |
4365 |
+ |
(TA)n |
Simple_repeat |
| scaffold12024 |
4759 |
4816 |
+ |
TEKAY_ZM-int |
LTR/Gypsy |
| scaffold12024 |
5483 |
5656 |
+ |
RS233 |
Unspecified |
| scaffold12024 |
5983 |
6035 |
+ |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold12024 |
6740 |
6830 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold12024 |
7060 |
7096 |
+ |
A-rich |
Low_complexity |
| scaffold12024 |
7153 |
7227 |
- |
hAT-1_EPa |
DNA/hAT-Ac |
| scaffold12024 |
7239 |
7290 |
+ |
(TCT)n |
Simple_repeat |
| scaffold12024 |
8081 |
8100 |
+ |
(AT)n |
Simple_repeat |
| scaffold12024 |
8123 |
8599 |
- |
PL350 |
Unspecified |
| scaffold12024 |
8639 |
8722 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold12024 |
9319 |
9393 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold12024 |
9585 |
10057 |
+ |
RS403 |
Unspecified |
| scaffold12024 |
10830 |
11850 |
+ |
RS57 |
Unspecified |
| scaffold12024 |
11446 |
12197 |
- |
RS403 |
Unspecified |
| scaffold12024 |
11783 |
12576 |
- |
RS583 |
Unspecified |
| scaffold12024 |
13823 |
13879 |
+ |
(ATTTTG)n |
Simple_repeat |
| scaffold12024 |
14160 |
14217 |
+ |
(TAC)n |
Simple_repeat |
| scaffold12024 |
14311 |
14349 |
+ |
(CTTCTT)n |
Simple_repeat |
| scaffold12024 |
14997 |
15003 |
+ |
(GTGTTT)n |
Simple_repeat |
| scaffold12024 |
15004 |
15039 |
+ |
(TGTTGT)n |
Simple_repeat |
| scaffold12024 |
15040 |
15073 |
+ |
(GTGTTT)n |
Simple_repeat |
| scaffold12024 |
15201 |
15655 |
- |
PL334 |
Unspecified |
| scaffold12024 |
15557 |
16170 |
+ |
PL862 |
Unspecified |
| scaffold12024 |
15692 |
16717 |
+ |
(ATATAA)n |
Simple_repeat |
| scaffold12024 |
16202 |
16717 |
+ |
(ATATAA)n |
Simple_repeat |
| scaffold12024 |
16722 |
16825 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold12024 |
17495 |
17539 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold12024 |
17659 |
17686 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold12024 |
18000 |
18024 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold12024 |
18142 |
18187 |
+ |
(CAAT)n |
Simple_repeat |
| scaffold12024 |
18208 |
18721 |
- |
RS403 |
Unspecified |
| scaffold12024 |
18916 |
19008 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold12024 |
19018 |
19059 |
+ |
(GTATTT)n |
Simple_repeat |
| scaffold12024 |
19067 |
19164 |
+ |
(TTATAC)n |
Simple_repeat |
| scaffold12024 |
19593 |
19641 |
+ |
(T)n |
Simple_repeat |
| scaffold12024 |
19757 |
20205 |
+ |
PL486 |
Unspecified |
| scaffold12024 |
20892 |
20963 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold12024 |
21052 |
21083 |
+ |
GA-rich |
Low_complexity |
| scaffold12024 |
21221 |
21247 |
+ |
(AGT)n |
Simple_repeat |
| scaffold12024 |
21690 |
21727 |
+ |
(GTA)n |
Simple_repeat |
| scaffold12024 |
21754 |
21810 |
+ |
(TAATG)n |
Simple_repeat |
| scaffold12024 |
22060 |
22103 |
+ |
A-rich |
Low_complexity |
| scaffold12024 |
22795 |
23061 |
- |
RS5093 |
Unspecified |
| scaffold12024 |
23056 |
23682 |
+ |
PL344 |
Unspecified |
| scaffold12024 |
23440 |
23761 |
+ |
RS2963 |
Unspecified |
| scaffold12024 |
24488 |
24546 |
+ |
GA-rich |
Low_complexity |
| scaffold12024 |
24932 |
25044 |
+ |
(GTT)n |
Simple_repeat |
| scaffold12024 |
25631 |
25711 |
+ |
A-rich |
Low_complexity |
| scaffold12024 |
26334 |
26386 |
+ |
(ACTCAAC)n |
Simple_repeat |
| scaffold12024 |
26983 |
27010 |
+ |
(ACC)n |
Simple_repeat |
| scaffold12024 |
27780 |
27880 |
+ |
(TTG)n |
Simple_repeat |
| scaffold12024 |
28473 |
28682 |
+ |
TGM5_GM |
DNA/CMC-EnSpm |
| scaffold12024 |
30276 |
30323 |
+ |
A-rich |
Low_complexity |
| scaffold12024 |
30371 |
30408 |
+ |
A-rich |
Low_complexity |
| scaffold12024 |
30444 |
30502 |
+ |
(A)n |
Simple_repeat |
| scaffold12024 |
30895 |
31050 |
+ |
PL159 |
Unspecified |
| scaffold12024 |
31202 |
31473 |
+ |
RS1856 |
Unspecified |
| scaffold12024 |
33426 |
33454 |
+ |
(TA)n |
Simple_repeat |
| scaffold12024 |
33835 |
33878 |
+ |
(TA)n |
Simple_repeat |
| scaffold12024 |
36780 |
36884 |
- |
OPHELIA3_HV |
LTR/Gypsy |
| scaffold12024 |
37484 |
37534 |
+ |
(TTTTGTG)n |
Simple_repeat |
| scaffold12024 |
38272 |
38316 |
+ |
A-rich |
Low_complexity |
| scaffold12024 |
38461 |
38487 |
+ |
(C)n |
Simple_repeat |
| scaffold12024 |
41577 |
41899 |
+ |
RS8154 |
Unspecified |
| scaffold12024 |
42653 |
42892 |
+ |
RS2931 |
Unspecified |
| scaffold12024 |
44185 |
44247 |
+ |
(TGTGT)n |
Simple_repeat |
| scaffold12024 |
44221 |
44248 |
+ |
(TG)n |
Simple_repeat |
| scaffold12024 |
44272 |
44310 |
+ |
(GATGA)n |
Simple_repeat |
| scaffold12024 |
44669 |
44960 |
+ |
RS2235 |
Unspecified |
| scaffold12024 |
45157 |
45345 |
+ |
RS8270 |
Unspecified |
| scaffold12024 |
46014 |
46053 |
+ |
(TATTGAT)n |
Simple_repeat |
| scaffold12024 |
47271 |
47530 |
+ |
RS6829 |
Unspecified |
| scaffold12024 |
47556 |
47647 |
+ |
Gypsy-26_ST-I |
LTR/Gypsy |
| scaffold12024 |
47837 |
47883 |
+ |
(CTT)n |
Simple_repeat |
| scaffold12024 |
47893 |
47924 |
+ |
(CAT)n |
Simple_repeat |
| scaffold12024 |
47925 |
48008 |
+ |
ATCopia24I |
LTR/Copia |