scaffold1306 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1306 |
2 |
139 |
+ |
PL344 |
Unspecified |
| scaffold1306 |
138 |
296 |
- |
RS3332 |
Unspecified |
| scaffold1306 |
208 |
357 |
- |
RS8365 |
Unspecified |
| scaffold1306 |
370 |
503 |
+ |
RS8209 |
Unspecified |
| scaffold1306 |
463 |
625 |
+ |
RS3088 |
Unspecified |
| scaffold1306 |
531 |
760 |
+ |
RS5645 |
Unspecified |
| scaffold1306 |
758 |
819 |
+ |
(AGCAG)n |
Simple_repeat |
| scaffold1306 |
1390 |
1507 |
+ |
(TGT)n |
Simple_repeat |
| scaffold1306 |
1538 |
1605 |
+ |
GA-rich |
Low_complexity |
| scaffold1306 |
1685 |
1944 |
- |
PL116 |
Unspecified |
| scaffold1306 |
2483 |
2853 |
+ |
RS8 |
Unspecified |
| scaffold1306 |
2961 |
3125 |
+ |
RS82 |
Unspecified |
| scaffold1306 |
3116 |
3537 |
+ |
PL635 |
Unspecified |
| scaffold1306 |
3528 |
3649 |
+ |
RS82 |
Unspecified |
| scaffold1306 |
3930 |
4229 |
+ |
RS1746 |
Unspecified |
| scaffold1306 |
4002 |
4300 |
- |
RS1746 |
Unspecified |
| scaffold1306 |
4601 |
4688 |
+ |
A-rich |
Low_complexity |
| scaffold1306 |
5274 |
5298 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold1306 |
6752 |
6791 |
+ |
(AATA)n |
Simple_repeat |
| scaffold1306 |
7039 |
7056 |
+ |
(T)n |
Simple_repeat |
| scaffold1306 |
7436 |
7492 |
+ |
(TAA)n |
Simple_repeat |
| scaffold1306 |
7794 |
8283 |
- |
RS17268 |
Unspecified |
| scaffold1306 |
8301 |
8421 |
+ |
RS477 |
Unspecified |
| scaffold1306 |
8418 |
8784 |
- |
RS8 |
Unspecified |
| scaffold1306 |
8786 |
8928 |
+ |
RS477 |
Unspecified |
| scaffold1306 |
12725 |
12962 |
- |
RS11588 |
Unspecified |
| scaffold1306 |
12842 |
13015 |
- |
RS13333 |
Unspecified |
| scaffold1306 |
13087 |
13117 |
+ |
(T)n |
Simple_repeat |
| scaffold1306 |
13269 |
13290 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold1306 |
13383 |
14863 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1306 |
14135 |
14863 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1306 |
14627 |
14772 |
+ |
Copia-101_Mad-I |
LTR/Copia |
| scaffold1306 |
14866 |
15161 |
+ |
Copia-101_Mad-I |
LTR/Copia |
| scaffold1306 |
15180 |
16165 |
+ |
Copia-101_Mad-I |
LTR/Copia |
| scaffold1306 |
16323 |
17555 |
+ |
Copia-101_Mad-I |
LTR/Copia |
| scaffold1306 |
17961 |
18098 |
- |
RS7397 |
Unspecified |
| scaffold1306 |
19556 |
19610 |
+ |
A-rich |
Low_complexity |
| scaffold1306 |
19754 |
19829 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1306 |
20511 |
20794 |
- |
RS12299 |
Unspecified |
| scaffold1306 |
21404 |
21454 |
+ |
(GTG)n |
Simple_repeat |
| scaffold1306 |
21456 |
21519 |
+ |
(GGTGAGA)n |
Simple_repeat |
| scaffold1306 |
22685 |
23138 |
+ |
RS1275 |
Unspecified |
| scaffold1306 |
23016 |
23162 |
- |
RS4983 |
Unspecified |
| scaffold1306 |
23600 |
23753 |
- |
RS7143 |
Unspecified |
| scaffold1306 |
23913 |
24079 |
+ |
RS5451 |
Unspecified |
| scaffold1306 |
24103 |
25744 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold1306 |
26103 |
27361 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold1306 |
27507 |
28346 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1306 |
27805 |
28105 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold1306 |
28549 |
28720 |
+ |
RS5451 |
Unspecified |
| scaffold1306 |
28946 |
28989 |
+ |
A-rich |
Low_complexity |
| scaffold1306 |
29774 |
29847 |
- |
RS29 |
Unspecified |
| scaffold1306 |
29841 |
30102 |
- |
RS16888 |
Unspecified |
| scaffold1306 |
30103 |
30364 |
+ |
RS29 |
Unspecified |
| scaffold1306 |
30345 |
30890 |
+ |
PL803 |
Unspecified |
| scaffold1306 |
31163 |
31225 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold1306 |
31292 |
31345 |
+ |
(A)n |
Simple_repeat |
| scaffold1306 |
33708 |
33746 |
+ |
(A)n |
Simple_repeat |
| scaffold1306 |
34116 |
34156 |
+ |
(CAT)n |
Simple_repeat |
| scaffold1306 |
34356 |
34397 |
+ |
(TTTCATC)n |
Simple_repeat |
| scaffold1306 |
34856 |
34948 |
+ |
RS1078 |
Unspecified |
| scaffold1306 |
35451 |
35624 |
- |
RS233 |
Unspecified |
| scaffold1306 |
35470 |
35630 |
+ |
RS2719 |
Unspecified |
| scaffold1306 |
36279 |
36339 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold1306 |
36444 |
38085 |
- |
Copia-78_ST-I |
LTR/Copia |
| scaffold1306 |
36444 |
37986 |
- |
Copia-78_ST-I |
LTR/Copia |
| scaffold1306 |
37932 |
38085 |
+ |
RS9651 |
Unspecified |
| scaffold1306 |
38420 |
38571 |
- |
Copia-78_ST-I |
LTR/Copia |
| scaffold1306 |
38668 |
38719 |
+ |
(TATTTG)n |
Simple_repeat |
| scaffold1306 |
39253 |
39303 |
+ |
(GACCTT)n |
Simple_repeat |
| scaffold1306 |
39477 |
40225 |
- |
Copia-78_ST-I |
LTR/Copia |
| scaffold1306 |
40226 |
40615 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1306 |
40891 |
41470 |
- |
Copia-78_ST-I |
LTR/Copia |
| scaffold1306 |
41755 |
41815 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold1306 |
42160 |
42205 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold1306 |
42756 |
42809 |
+ |
(ATATCCA)n |
Simple_repeat |
| scaffold1306 |
42872 |
42913 |
+ |
(TCGGATT)n |
Simple_repeat |
| scaffold1306 |
43655 |
43672 |
+ |
(A)n |
Simple_repeat |
| scaffold1306 |
43774 |
43969 |
- |
RS915 |
Unspecified |
| scaffold1306 |
74358 |
74456 |
+ |
GA-rich |
Low_complexity |