scaffold13095 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold13095 |
18 |
103 |
+ |
RS7475 |
Unspecified |
| scaffold13095 |
99 |
378 |
- |
PL850 |
Unspecified |
| scaffold13095 |
740 |
807 |
+ |
(ATTTTAA)n |
Simple_repeat |
| scaffold13095 |
836 |
893 |
+ |
(T)n |
Simple_repeat |
| scaffold13095 |
1237 |
1289 |
+ |
A-rich |
Low_complexity |
| scaffold13095 |
1396 |
1427 |
+ |
(TAATCA)n |
Simple_repeat |
| scaffold13095 |
1550 |
1582 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold13095 |
3382 |
3440 |
+ |
PL621 |
Unspecified |
| scaffold13095 |
3514 |
3578 |
+ |
RS915 |
Unspecified |
| scaffold13095 |
3598 |
3861 |
- |
RS356 |
Unspecified |
| scaffold13095 |
3855 |
3964 |
- |
RS4914 |
Unspecified |
| scaffold13095 |
5918 |
6151 |
- |
RS138 |
Unspecified |
| scaffold13095 |
6972 |
7247 |
- |
PL114 |
Unspecified |
| scaffold13095 |
7270 |
7490 |
+ |
RS58 |
Unspecified |
| scaffold13095 |
7660 |
7852 |
- |
RS18 |
Unspecified |
| scaffold13095 |
8399 |
8445 |
+ |
A-rich |
Low_complexity |
| scaffold13095 |
9166 |
9376 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold13095 |
12664 |
12928 |
- |
RS356 |
Unspecified |
| scaffold13095 |
13033 |
13114 |
- |
RS1180 |
Unspecified |
| scaffold13095 |
13166 |
13218 |
+ |
A-rich |
Low_complexity |
| scaffold13095 |
13640 |
13796 |
- |
RS1180 |
Unspecified |
| scaffold13095 |
13926 |
13987 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold13095 |
14225 |
14395 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold13095 |
17817 |
18008 |
+ |
(ACA)n |
Simple_repeat |
| scaffold13095 |
18125 |
18207 |
+ |
A-rich |
Low_complexity |
| scaffold13095 |
18127 |
18176 |
+ |
GA-rich |
Low_complexity |
| scaffold13095 |
18303 |
18730 |
- |
RS849 |
Unspecified |
| scaffold13095 |
18911 |
19017 |
- |
RS562 |
Unspecified |
| scaffold13095 |
18968 |
19711 |
- |
RS562 |
Unspecified |
| scaffold13095 |
19614 |
19729 |
+ |
RS17699 |
Unspecified |
| scaffold13095 |
19711 |
19875 |
- |
RS4311 |
Unspecified |
| scaffold13095 |
20266 |
20338 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold13095 |
20659 |
21007 |
- |
RS8 |
Unspecified |
| scaffold13095 |
21222 |
21238 |
+ |
(T)n |
Simple_repeat |
| scaffold13095 |
21829 |
22184 |
- |
RS8 |
Unspecified |
| scaffold13095 |
22538 |
22566 |
+ |
A-rich |
Low_complexity |
| scaffold13095 |
23547 |
23575 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold13095 |
23784 |
23811 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold13095 |
23956 |
24008 |
+ |
PL539 |
Unspecified |
| scaffold13095 |
23961 |
24003 |
+ |
RS669 |
Unspecified |
| scaffold13095 |
26263 |
26485 |
+ |
RS741 |
Unspecified |
| scaffold13095 |
26402 |
27247 |
+ |
RS822 |
Unspecified |
| scaffold13095 |
27654 |
27983 |
+ |
RS962 |
Unspecified |
| scaffold13095 |
28050 |
28335 |
+ |
RS10417 |
Unspecified |
| scaffold13095 |
28440 |
28519 |
+ |
RS10851 |
Unspecified |
| scaffold13095 |
28625 |
28642 |
+ |
(T)n |
Simple_repeat |
| scaffold13095 |
29276 |
29592 |
- |
RS1716 |
Unspecified |
| scaffold13095 |
29321 |
29684 |
- |
PL757 |
Unspecified |
| scaffold13095 |
29523 |
29802 |
- |
RS1781 |
Unspecified |
| scaffold13095 |
29842 |
30224 |
+ |
A-rich |
Low_complexity |
| scaffold13095 |
30142 |
30224 |
+ |
A-rich |
Low_complexity |
| scaffold13095 |
31069 |
32111 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold13095 |
32261 |
32610 |
+ |
Copia-77_SB-I |
LTR/Copia |
| scaffold13095 |
32313 |
33141 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold13095 |
33201 |
33538 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold13095 |
33623 |
34339 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold13095 |
33877 |
34192 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold13095 |
36725 |
37192 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold13095 |
37279 |
37622 |
+ |
RS5399 |
Unspecified |
| scaffold13095 |
37345 |
37679 |
- |
RS6338 |
Unspecified |
| scaffold13095 |
38064 |
38128 |
+ |
RS1202 |
Unspecified |
| scaffold13095 |
38444 |
39694 |
+ |
RS673 |
Unspecified |
| scaffold13095 |
47238 |
47281 |
+ |
(CCA)n |
Simple_repeat |
| scaffold13095 |
48996 |
49037 |
+ |
(CAT)n |
Simple_repeat |
| scaffold13095 |
49417 |
49499 |
+ |
(GTG)n |
Simple_repeat |
| scaffold13095 |
50147 |
50191 |
+ |
(GCCCG)n |
Simple_repeat |
| scaffold13095 |
50377 |
50425 |
+ |
RS972 |
Unspecified |
| scaffold13095 |
50450 |
50586 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold13095 |
50597 |
50630 |
+ |
(TATTAT)n |
Simple_repeat |
| scaffold13095 |
50633 |
50671 |
+ |
(ATA)n |
Simple_repeat |
| scaffold13095 |
50633 |
50767 |
+ |
(ATA)n |
Simple_repeat |
| scaffold13095 |
50666 |
50767 |
+ |
RS4835 |
Unspecified |
| scaffold13095 |
52158 |
52186 |
+ |
(T)n |
Simple_repeat |
| scaffold13095 |
52366 |
52716 |
- |
PL121 |
Unspecified |
| scaffold13095 |
53018 |
53161 |
- |
RS115 |
Unspecified |
| scaffold13095 |
53102 |
53169 |
- |
RS20 |
Unspecified |
| scaffold13095 |
53541 |
53734 |
+ |
PL214 |
Unspecified |
| scaffold13095 |
53836 |
53871 |
- |
PL11 |
Unspecified |
| scaffold13095 |
54328 |
54387 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold13095 |
54447 |
54582 |
- |
RS5880 |
Unspecified |
| scaffold13095 |
54743 |
54806 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold13095 |
54877 |
55138 |
- |
STOWAWAY48_OS |
DNA/TcMar-Stowaway |
| scaffold13095 |
56018 |
56094 |
+ |
DNA-TA-1_STu |
DNA/TcMar-Stowaway |
| scaffold13095 |
57765 |
57789 |
+ |
(CATAT)n |
Simple_repeat |
| scaffold13095 |
57963 |
58140 |
- |
RS17573 |
Unspecified |
| scaffold13095 |
58494 |
58558 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold13095 |
58816 |
58847 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold13095 |
59230 |
59294 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold13095 |
59540 |
59584 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold13095 |
60158 |
60255 |
- |
RS79 |
Unspecified |
| scaffold13095 |
60567 |
60679 |
- |
RS285 |
Unspecified |
| scaffold13095 |
60684 |
60792 |
+ |
(ATA)n |
Simple_repeat |
| scaffold13095 |
65071 |
65427 |
+ |
Gypsy-112_GM-I |
LTR/Gypsy |
| scaffold13095 |
66499 |
66650 |
+ |
RS663 |
Unspecified |
| scaffold13095 |
67564 |
67624 |
- |
RS14970 |
Unspecified |
| scaffold13095 |
67582 |
67677 |
+ |
RS16382 |
Unspecified |
| scaffold13095 |
68025 |
68052 |
+ |
(A)n |
Simple_repeat |
| scaffold13095 |
68898 |
68919 |
+ |
(T)n |
Simple_repeat |
| scaffold13095 |
69233 |
69335 |
- |
RS16382 |
Unspecified |
| scaffold13095 |
69503 |
69683 |
+ |
PL93 |
Unspecified |
| scaffold13095 |
71794 |
71834 |
+ |
A-rich |
Low_complexity |
| scaffold13095 |
74016 |
74079 |
+ |
(AATATCA)n |
Simple_repeat |
| scaffold13095 |
74049 |
74080 |
+ |
(AT)n |
Simple_repeat |
| scaffold13095 |
74338 |
74355 |
+ |
(T)n |
Simple_repeat |
| scaffold13095 |
75560 |
75656 |
- |
RS18358 |
Unspecified |
| scaffold13095 |
75719 |
75768 |
+ |
(ATAATT)n |
Simple_repeat |
| scaffold13095 |
75989 |
76233 |
- |
RS16888 |
Unspecified |
| scaffold13095 |
76500 |
76553 |
+ |
GA-rich |
Low_complexity |
| scaffold13095 |
76675 |
76874 |
- |
RS7374 |
Unspecified |
| scaffold13095 |
76877 |
76996 |
+ |
RS4475 |
Unspecified |
| scaffold13095 |
76969 |
77063 |
+ |
RS586 |
Unspecified |
| scaffold13095 |
77067 |
77112 |
+ |
(TATAATC)n |
Simple_repeat |
| scaffold13095 |
78773 |
78826 |
+ |
GA-rich |
Low_complexity |
| scaffold13095 |
78948 |
79147 |
- |
RS7374 |
Unspecified |
| scaffold13095 |
79150 |
79269 |
+ |
RS4475 |
Unspecified |
| scaffold13095 |
79242 |
79336 |
+ |
RS586 |
Unspecified |
| scaffold13095 |
79340 |
79385 |
+ |
(TATAATC)n |
Simple_repeat |
| scaffold13095 |
79604 |
79670 |
- |
RS12517 |
Unspecified |
| scaffold13095 |
79619 |
79670 |
- |
RS2316 |
Unspecified |
| scaffold13095 |
79762 |
79811 |
+ |
RS14977 |
Unspecified |
| scaffold13095 |
79887 |
79917 |
+ |
(AAC)n |
Simple_repeat |
| scaffold13095 |
80044 |
80284 |
+ |
RS12757 |
Unspecified |
| scaffold13095 |
80349 |
80421 |
- |
tRNASAT-1_ZM |
Satellite |
| scaffold13095 |
80535 |
80579 |
+ |
(CAC)n |
Simple_repeat |
| scaffold13095 |
82615 |
82653 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold13095 |
84645 |
84686 |
+ |
(TT)n |
Simple_repeat |
| scaffold13095 |
84991 |
85215 |
+ |
RS342 |
Unspecified |
| scaffold13095 |
89185 |
89215 |
+ |
(A)n |
Simple_repeat |
| scaffold13095 |
89868 |
89893 |
+ |
(T)n |
Simple_repeat |
| scaffold13095 |
90260 |
90298 |
+ |
GA-rich |
Low_complexity |
| scaffold13095 |
90463 |
90493 |
+ |
(A)n |
Simple_repeat |
| scaffold13095 |
90805 |
90851 |
+ |
(TCTT)n |
Simple_repeat |
| scaffold13095 |
90971 |
91006 |
+ |
(AGC)n |
Simple_repeat |
| scaffold13095 |
91444 |
91469 |
+ |
(GAA)n |
Simple_repeat |
| scaffold13095 |
92371 |
92410 |
+ |
(AT)n |
Simple_repeat |
| scaffold13095 |
93191 |
93235 |
+ |
(ATTTTTG)n |
Simple_repeat |
| scaffold13095 |
93318 |
93355 |
+ |
(AT)n |
Simple_repeat |
| scaffold13095 |
94921 |
95009 |
+ |
A-rich |
Low_complexity |
| scaffold13095 |
95273 |
95321 |
+ |
A-rich |
Low_complexity |
| scaffold13095 |
96182 |
96205 |
+ |
(A)n |
Simple_repeat |
| scaffold13095 |
99395 |
99433 |
- |
RS14323 |
Unspecified |
| scaffold13095 |
99977 |
100029 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold13095 |
100703 |
100737 |
+ |
(A)n |
Simple_repeat |
| scaffold13095 |
102157 |
102191 |
+ |
(A)n |
Simple_repeat |
| scaffold13095 |
106315 |
106341 |
+ |
(AACCG)n |
Simple_repeat |
| scaffold13095 |
106376 |
106445 |
+ |
(ATCCAT)n |
Simple_repeat |
| scaffold13095 |
106569 |
106704 |
+ |
(ATTTGG)n |
Simple_repeat |
| scaffold13095 |
107335 |
107380 |
+ |
(AAAAAAC)n |
Simple_repeat |
| scaffold13095 |
107381 |
107426 |
+ |
A-rich |
Low_complexity |
| scaffold13095 |
107474 |
107738 |
+ |
PL81 |
Unspecified |
| scaffold13095 |
107971 |
108017 |
+ |
A-rich |
Low_complexity |
| scaffold13095 |
108216 |
108257 |
+ |
(ATTAATT)n |
Simple_repeat |
| scaffold13095 |
108353 |
108385 |
+ |
RS915 |
Unspecified |
| scaffold13095 |
108549 |
108572 |
+ |
(T)n |
Simple_repeat |
| scaffold13095 |
110771 |
110913 |
+ |
RS778 |
Unspecified |
| scaffold13095 |
110818 |
110930 |
- |
RS9599 |
Unspecified |
| scaffold13095 |
111190 |
111238 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold13095 |
111348 |
111677 |
+ |
RS210 |
Unspecified |
| scaffold13095 |
112435 |
112468 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold13095 |
112931 |
112991 |
+ |
RS333 |
Unspecified |
| scaffold13095 |
113000 |
113192 |
+ |
RS17600 |
Unspecified |
| scaffold13095 |
113034 |
113192 |
+ |
RS16679 |
Unspecified |
| scaffold13095 |
113894 |
113935 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold13095 |
114376 |
114436 |
+ |
RS333 |
Unspecified |
| scaffold13095 |
114457 |
114713 |
+ |
RS17600 |
Unspecified |
| scaffold13095 |
117231 |
117328 |
- |
RS4475 |
Unspecified |
| scaffold13095 |
117436 |
117548 |
+ |
RS1221 |
Unspecified |
| scaffold13095 |
117900 |
118165 |
- |
RS29 |
Unspecified |
| scaffold13095 |
120312 |
120332 |
+ |
(T)n |
Simple_repeat |
| scaffold13095 |
121471 |
121661 |
- |
RS18 |
Unspecified |
| scaffold13095 |
121757 |
121914 |
+ |
A-rich |
Low_complexity |
| scaffold13095 |
122203 |
122233 |
+ |
A-rich |
Low_complexity |
| scaffold13095 |
122301 |
122461 |
+ |
PL2 |
Unspecified |
| scaffold13095 |
122454 |
122580 |
+ |
PL2 |
Unspecified |
| scaffold13095 |
122578 |
122760 |
+ |
PL2 |
Unspecified |
| scaffold13095 |
122857 |
122888 |
+ |
(A)n |
Simple_repeat |
| scaffold13095 |
123005 |
123047 |
+ |
(A)n |
Simple_repeat |
| scaffold13095 |
123167 |
123203 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold13095 |
123505 |
123531 |
+ |
A-rich |
Low_complexity |