scaffold13716 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold13716 |
1 |
91 |
+ |
PL593 |
Unspecified |
| scaffold13716 |
245 |
471 |
- |
RS2839 |
Unspecified |
| scaffold13716 |
474 |
600 |
+ |
RS377 |
Unspecified |
| scaffold13716 |
995 |
1030 |
+ |
RS12053 |
Unspecified |
| scaffold13716 |
4040 |
4125 |
+ |
RS14475 |
Unspecified |
| scaffold13716 |
4818 |
4870 |
+ |
(TTAGTTTA)n |
Simple_repeat |
| scaffold13716 |
5224 |
5302 |
+ |
A-rich |
Low_complexity |
| scaffold13716 |
6551 |
7088 |
- |
RS1281 |
Unspecified |
| scaffold13716 |
7316 |
7351 |
+ |
A-rich |
Low_complexity |
| scaffold13716 |
7540 |
7621 |
- |
RS2495 |
Unspecified |
| scaffold13716 |
7776 |
7824 |
+ |
A-rich |
Low_complexity |
| scaffold13716 |
8875 |
8968 |
+ |
(ATTCA)n |
Simple_repeat |
| scaffold13716 |
9063 |
9176 |
+ |
RS14852 |
Unspecified |
| scaffold13716 |
9076 |
9261 |
- |
RS38 |
Unspecified |
| scaffold13716 |
9962 |
10708 |
+ |
cacta |
cacta(TransposonPSI) |
| scaffold13716 |
13151 |
13507 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold13716 |
14252 |
14329 |
+ |
A-rich |
Low_complexity |
| scaffold13716 |
14718 |
14759 |
+ |
(ATTTAT)n |
Simple_repeat |
| scaffold13716 |
15201 |
15500 |
+ |
RS8789 |
Unspecified |
| scaffold13716 |
15234 |
15618 |
+ |
RS468 |
Unspecified |
| scaffold13716 |
15472 |
16030 |
+ |
PL329 |
Unspecified |
| scaffold13716 |
16772 |
16975 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold13716 |
16980 |
17029 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold13716 |
17372 |
17782 |
- |
PL886 |
Unspecified |
| scaffold13716 |
17781 |
17976 |
+ |
PL80 |
Unspecified |
| scaffold13716 |
18135 |
18168 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold13716 |
18216 |
18234 |
+ |
(T)n |
Simple_repeat |
| scaffold13716 |
18649 |
18717 |
+ |
Copia-101_Mad-I |
LTR/Copia |
| scaffold13716 |
19003 |
22736 |
+ |
Copia-101_Mad-I |
LTR/Copia |
| scaffold13716 |
23535 |
24108 |
+ |
RS1293 |
Unspecified |
| scaffold13716 |
24082 |
24837 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold13716 |
25336 |
25622 |
- |
RS2839 |
Unspecified |
| scaffold13716 |
27198 |
27291 |
+ |
A-rich |
Low_complexity |
| scaffold13716 |
27198 |
27239 |
+ |
A-rich |
Low_complexity |
| scaffold13716 |
27222 |
27291 |
+ |
RS17009 |
Unspecified |
| scaffold13716 |
27237 |
27866 |
+ |
PL193 |
Unspecified |
| scaffold13716 |
28354 |
28456 |
+ |
(ATA)n |
Simple_repeat |
| scaffold13716 |
28691 |
28813 |
+ |
PL206 |
Unspecified |
| scaffold13716 |
29398 |
29456 |
+ |
A-rich |
Low_complexity |
| scaffold13716 |
30361 |
30623 |
+ |
RS240 |
Unspecified |
| scaffold13716 |
30678 |
30911 |
- |
hAT |
hAT(TransposonPSI) |
| scaffold13716 |
31530 |
31551 |
+ |
(ATGA)n |
Simple_repeat |
| scaffold13716 |
31552 |
31595 |
+ |
(AGTG)n |
Simple_repeat |
| scaffold13716 |
31596 |
31616 |
+ |
(ATGA)n |
Simple_repeat |
| scaffold13716 |
31830 |
32004 |
+ |
RS7802 |
Unspecified |
| scaffold13716 |
32260 |
33750 |
+ |
Caulimovirus-2_VVi |
LTR/Caulimovirus |
| scaffold13716 |
33843 |
33874 |
+ |
(T)n |
Simple_repeat |
| scaffold13716 |
34579 |
34838 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold13716 |
34901 |
34919 |
+ |
(A)n |
Simple_repeat |
| scaffold13716 |
35216 |
35314 |
+ |
RS5006 |
Unspecified |
| scaffold13716 |
35355 |
35372 |
+ |
(T)n |
Simple_repeat |
| scaffold13716 |
35782 |
35837 |
+ |
(AT)n |
Simple_repeat |
| scaffold13716 |
39007 |
39044 |
+ |
A-rich |
Low_complexity |
| scaffold13716 |
39594 |
39693 |
+ |
A-rich |
Low_complexity |
| scaffold13716 |
40805 |
40836 |
+ |
(CAT)n |
Simple_repeat |
| scaffold13716 |
41204 |
41364 |
+ |
RS959 |
Unspecified |
| scaffold13716 |
41476 |
41563 |
+ |
A-rich |
Low_complexity |
| scaffold13716 |
41891 |
41954 |
+ |
(GTTGAAT)n |
Simple_repeat |
| scaffold13716 |
42018 |
42091 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold13716 |
42338 |
42362 |
+ |
(A)n |
Simple_repeat |
| scaffold13716 |
42363 |
42382 |
+ |
(AATA)n |
Simple_repeat |
| scaffold13716 |
43378 |
43413 |
+ |
A-rich |
Low_complexity |
| scaffold13716 |
43717 |
43760 |
+ |
A-rich |
Low_complexity |
| scaffold13716 |
44670 |
44724 |
+ |
PL620 |
Unspecified |
| scaffold13716 |
44720 |
44919 |
- |
PL339 |
Unspecified |
| scaffold13716 |
46323 |
46596 |
+ |
RS3423 |
Unspecified |
| scaffold13716 |
46323 |
46630 |
- |
PL931 |
Unspecified |
| scaffold13716 |
47486 |
47523 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold13716 |
47868 |
49201 |
- |
PL568 |
Unspecified |
| scaffold13716 |
49350 |
49491 |
+ |
RS41 |
Unspecified |
| scaffold13716 |
49545 |
49665 |
+ |
hAT-N18_SB |
DNA/hAT-Ac |
| scaffold13716 |
50246 |
50391 |
+ |
hAT-17N1_ZM |
DNA/hAT-Ac |
| scaffold13716 |
50405 |
50557 |
+ |
(A)n |
Simple_repeat |
| scaffold13716 |
50463 |
50557 |
+ |
(A)n |
Simple_repeat |
| scaffold13716 |
51425 |
51452 |
+ |
(TG)n |
Simple_repeat |
| scaffold13716 |
53045 |
53067 |
+ |
(T)n |
Simple_repeat |
| scaffold13716 |
59684 |
59716 |
+ |
(ACCGAT)n |
Simple_repeat |
| scaffold13716 |
59933 |
60007 |
- |
hAT-9_SBi |
DNA/hAT-Tag1 |
| scaffold13716 |
60018 |
60047 |
+ |
(T)n |
Simple_repeat |
| scaffold13716 |
60147 |
60246 |
- |
HAT-N8_Mad |
DNA/hAT-Tag1 |
| scaffold13716 |
60995 |
61174 |
- |
RS8495 |
Unspecified |
| scaffold13716 |
61210 |
61230 |
+ |
(A)n |
Simple_repeat |
| scaffold13716 |
61402 |
61420 |
+ |
(ACC)n |
Simple_repeat |
| scaffold13716 |
61700 |
61718 |
+ |
(T)n |
Simple_repeat |
| scaffold13716 |
69378 |
69421 |
+ |
(GATAAATA)n |
Simple_repeat |
| scaffold13716 |
70254 |
70287 |
+ |
(TAT)n |
Simple_repeat |
| scaffold13716 |
70599 |
70778 |
- |
RS5 |
Unspecified |
| scaffold13716 |
70910 |
70948 |
+ |
RS47 |
Unspecified |
| scaffold13716 |
70915 |
71172 |
- |
RS47 |
Unspecified |
| scaffold13716 |
71256 |
71274 |
+ |
(A)n |
Simple_repeat |
| scaffold13716 |
71638 |
71674 |
+ |
(T)n |
Simple_repeat |
| scaffold13716 |
71754 |
71793 |
+ |
G-rich |
Low_complexity |
| scaffold13716 |
76383 |
76467 |
+ |
(ATG)n |
Simple_repeat |
| scaffold13716 |
77001 |
77036 |
+ |
(T)n |
Simple_repeat |
| scaffold13716 |
79246 |
79322 |
+ |
DNA-TA-1_STu |
DNA/TcMar-Stowaway |
| scaffold13716 |
79655 |
79706 |
+ |
(T)n |
Simple_repeat |
| scaffold13716 |
81732 |
82538 |
- |
SHALINE10_MT |
LINE/L1 |
| scaffold13716 |
83649 |
83705 |
+ |
(TTAA)n |
Simple_repeat |