scaffold13788 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold13788 |
1 |
67 |
- |
PL111 |
Unspecified |
| scaffold13788 |
83 |
1065 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold13788 |
1082 |
1207 |
- |
Gypsy21-PTR_I-int |
LTR/Gypsy |
| scaffold13788 |
1444 |
1557 |
+ |
(TGTTTTT)n |
Simple_repeat |
| scaffold13788 |
1738 |
1762 |
+ |
(TTC)n |
Simple_repeat |
| scaffold13788 |
3190 |
4317 |
+ |
PL956 |
Unspecified |
| scaffold13788 |
5353 |
5443 |
+ |
PL911 |
Unspecified |
| scaffold13788 |
5719 |
6273 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold13788 |
6639 |
7388 |
+ |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold13788 |
8188 |
9924 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold13788 |
8357 |
9916 |
+ |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold13788 |
10140 |
10403 |
- |
PL911 |
Unspecified |
| scaffold13788 |
10564 |
10902 |
- |
PL678 |
Unspecified |
| scaffold13788 |
11035 |
11425 |
+ |
PL860 |
Unspecified |
| scaffold13788 |
11941 |
12006 |
+ |
Gypsy-173_ZM-I |
LTR/Gypsy |
| scaffold13788 |
12278 |
12321 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold13788 |
13397 |
13449 |
+ |
(TACAAC)n |
Simple_repeat |
| scaffold13788 |
13469 |
13513 |
+ |
(ACACT)n |
Simple_repeat |
| scaffold13788 |
13536 |
13613 |
+ |
(ACACA)n |
Simple_repeat |
| scaffold13788 |
15470 |
15594 |
+ |
RS9788 |
Unspecified |
| scaffold13788 |
15597 |
15900 |
+ |
RS646 |
Unspecified |
| scaffold13788 |
15900 |
16198 |
+ |
PL248 |
Unspecified |
| scaffold13788 |
16560 |
16588 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold13788 |
17054 |
17106 |
+ |
(ATA)n |
Simple_repeat |
| scaffold13788 |
17718 |
17774 |
+ |
A-rich |
Low_complexity |
| scaffold13788 |
17872 |
18613 |
- |
PL969 |
Unspecified |
| scaffold13788 |
18684 |
18730 |
+ |
(GTGAATA)n |
Simple_repeat |
| scaffold13788 |
20683 |
20728 |
+ |
(CAAG)n |
Simple_repeat |
| scaffold13788 |
20729 |
20775 |
+ |
A-rich |
Low_complexity |
| scaffold13788 |
21644 |
21720 |
+ |
RS646 |
Unspecified |
| scaffold13788 |
22147 |
22188 |
+ |
(AT)n |
Simple_repeat |
| scaffold13788 |
22189 |
22255 |
+ |
(TA)n |
Simple_repeat |
| scaffold13788 |
22256 |
22318 |
+ |
(AT)n |
Simple_repeat |
| scaffold13788 |
23250 |
23595 |
+ |
RS9788 |
Unspecified |
| scaffold13788 |
23912 |
24172 |
+ |
RS12725 |
Unspecified |
| scaffold13788 |
24393 |
24519 |
+ |
RS646 |
Unspecified |
| scaffold13788 |
24989 |
25048 |
+ |
(TATTTAT)n |
Simple_repeat |
| scaffold13788 |
25251 |
25281 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold13788 |
26143 |
26186 |
+ |
(CTTT)n |
Simple_repeat |
| scaffold13788 |
26415 |
26447 |
+ |
(ATGTTT)n |
Simple_repeat |
| scaffold13788 |
28103 |
28669 |
- |
PL188 |
Unspecified |
| scaffold13788 |
29270 |
29318 |
+ |
A-rich |
Low_complexity |
| scaffold13788 |
31063 |
31342 |
+ |
PL920 |
Unspecified |
| scaffold13788 |
31258 |
31388 |
- |
PL730 |
Unspecified |
| scaffold13788 |
33248 |
33304 |
+ |
A-rich |
Low_complexity |
| scaffold13788 |
33389 |
33446 |
+ |
A-rich |
Low_complexity |
| scaffold13788 |
33485 |
34020 |
+ |
(AATACG)n |
Simple_repeat |
| scaffold13788 |
33879 |
34020 |
+ |
(AATACG)n |
Simple_repeat |
| scaffold13788 |
34021 |
34067 |
+ |
(GTGAATA)n |
Simple_repeat |
| scaffold13788 |
35967 |
36020 |
+ |
(ACACAAC)n |
Simple_repeat |
| scaffold13788 |
36088 |
36164 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold13788 |
36790 |
36823 |
+ |
(AAT)n |
Simple_repeat |
| scaffold13788 |
36834 |
37025 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold13788 |
37038 |
37478 |
+ |
RS3062 |
Unspecified |
| scaffold13788 |
37491 |
37532 |
+ |
(TAT)n |
Simple_repeat |
| scaffold13788 |
37613 |
37635 |
+ |
(TTA)n |
Simple_repeat |
| scaffold13788 |
37902 |
39125 |
+ |
RS169 |
Unspecified |
| scaffold13788 |
40172 |
40242 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold13788 |
40665 |
40787 |
+ |
(TAAGTA)n |
Simple_repeat |
| scaffold13788 |
42119 |
42138 |
+ |
(A)n |
Simple_repeat |
| scaffold13788 |
43277 |
43396 |
- |
RS11087 |
Unspecified |
| scaffold13788 |
43423 |
43493 |
+ |
(TG)n |
Simple_repeat |
| scaffold13788 |
43494 |
43537 |
+ |
(AT)n |
Simple_repeat |
| scaffold13788 |
43600 |
43641 |
+ |
(AAT)n |
Simple_repeat |
| scaffold13788 |
43834 |
44179 |
+ |
RS9788 |
Unspecified |
| scaffold13788 |
44300 |
44343 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold13788 |
44504 |
44769 |
+ |
RS12725 |
Unspecified |
| scaffold13788 |
44967 |
45043 |
- |
RS1172 |
Unspecified |
| scaffold13788 |
45792 |
45811 |
+ |
(TA)n |
Simple_repeat |
| scaffold13788 |
46022 |
46110 |
+ |
(TCT)n |
Simple_repeat |
| scaffold13788 |
46281 |
46308 |
+ |
(TTC)n |
Simple_repeat |
| scaffold13788 |
46547 |
46844 |
- |
RS752 |
Unspecified |
| scaffold13788 |
47133 |
47166 |
+ |
(ATGTTG)n |
Simple_repeat |
| scaffold13788 |
47133 |
47596 |
+ |
(ATGTTG)n |
Simple_repeat |
| scaffold13788 |
47159 |
47596 |
+ |
RS2356 |
Unspecified |
| scaffold13788 |
47528 |
48011 |
- |
RS6824 |
Unspecified |
| scaffold13788 |
47650 |
48253 |
+ |
RS2356 |
Unspecified |
| scaffold13788 |
48155 |
48731 |
+ |
RS2171 |
Unspecified |
| scaffold13788 |
48985 |
49030 |
+ |
A-rich |
Low_complexity |
| scaffold13788 |
49158 |
49209 |
+ |
A-rich |
Low_complexity |
| scaffold13788 |
49287 |
49438 |
+ |
RS993 |
Unspecified |
| scaffold13788 |
49348 |
49531 |
+ |
RS5894 |
Unspecified |
| scaffold13788 |
49596 |
49646 |
+ |
GA-rich |
Low_complexity |
| scaffold13788 |
49671 |
49706 |
+ |
(GATTTT)n |
Simple_repeat |
| scaffold13788 |
49750 |
49828 |
+ |
(TTTTCT)n |
Simple_repeat |
| scaffold13788 |
52296 |
52322 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold13788 |
52824 |
53753 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold13788 |
53166 |
53401 |
+ |
L1-14_STu |
LINE/L1 |
| scaffold13788 |
53731 |
54168 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold13788 |
55256 |
55940 |
- |
PL405 |
Unspecified |
| scaffold13788 |
56426 |
56637 |
+ |
RS13321 |
Unspecified |
| scaffold13788 |
57079 |
58100 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold13788 |
58102 |
60196 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold13788 |
60100 |
61567 |
- |
PL816 |
Unspecified |
| scaffold13788 |
61574 |
62435 |
+ |
RS645 |
Unspecified |
| scaffold13788 |
62418 |
62575 |
+ |
PL240 |
Unspecified |