scaffold1396 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1396 |
100 |
632 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold1396 |
2704 |
3822 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1396 |
2705 |
3421 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold1396 |
4319 |
4351 |
+ |
GA-rich |
Low_complexity |
| scaffold1396 |
4350 |
5631 |
+ |
PL475 |
Unspecified |
| scaffold1396 |
6467 |
6515 |
+ |
A-rich |
Low_complexity |
| scaffold1396 |
6820 |
6844 |
+ |
(T)n |
Simple_repeat |
| scaffold1396 |
7920 |
7986 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold1396 |
8743 |
8791 |
+ |
(ACAACAT)n |
Simple_repeat |
| scaffold1396 |
9149 |
9319 |
+ |
(CATA)n |
Simple_repeat |
| scaffold1396 |
10072 |
10130 |
- |
Gypsy-193_ZM-I |
LTR/Gypsy |
| scaffold1396 |
10244 |
10300 |
+ |
(CATAA)n |
Simple_repeat |
| scaffold1396 |
12812 |
12893 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1396 |
12894 |
13338 |
- |
RS132 |
Unspecified |
| scaffold1396 |
13499 |
13549 |
+ |
(AACTAA)n |
Simple_repeat |
| scaffold1396 |
13979 |
13991 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold1396 |
13992 |
14038 |
+ |
(TTTGTA)n |
Simple_repeat |
| scaffold1396 |
16050 |
16114 |
+ |
A-rich |
Low_complexity |
| scaffold1396 |
17320 |
17369 |
+ |
A-rich |
Low_complexity |
| scaffold1396 |
17545 |
17732 |
+ |
RS3217 |
Unspecified |
| scaffold1396 |
18932 |
19258 |
+ |
RS3795 |
Unspecified |
| scaffold1396 |
20202 |
20230 |
+ |
(CAACAC)n |
Simple_repeat |
| scaffold1396 |
20644 |
20678 |
+ |
(TCT)n |
Simple_repeat |
| scaffold1396 |
21239 |
21263 |
+ |
(CACT)n |
Simple_repeat |
| scaffold1396 |
21409 |
22833 |
- |
Gypsy-23_ST-I |
LTR/Gypsy |
| scaffold1396 |
22943 |
23392 |
- |
GYCUME1_I-int |
LTR/Gypsy |
| scaffold1396 |
23391 |
23989 |
- |
GYCUME1_I-int |
LTR/Gypsy |
| scaffold1396 |
23977 |
25206 |
- |
ATGP1-I |
LTR/Gypsy |
| scaffold1396 |
25496 |
25594 |
- |
Gypsy-45_STu-I |
LTR/Gypsy |
| scaffold1396 |
25700 |
25778 |
- |
Gypsy-45_STu-I |
LTR/Gypsy |
| scaffold1396 |
25902 |
26378 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1396 |
27441 |
28584 |
+ |
(AAC)n |
Simple_repeat |
| scaffold1396 |
27441 |
27529 |
+ |
(AAC)n |
Simple_repeat |
| scaffold1396 |
27511 |
28584 |
+ |
RS211 |
Unspecified |
| scaffold1396 |
30829 |
31281 |
- |
Gypsy-45_STu-I |
LTR/Gypsy |
| scaffold1396 |
31402 |
31471 |
- |
Gypsy-2_Mad-I |
LTR/Gypsy |
| scaffold1396 |
31443 |
31541 |
- |
Gypsy-2_Mad-I |
LTR/Gypsy |
| scaffold1396 |
31639 |
31744 |
- |
RIRE8B_I-int |
LTR/Gypsy |
| scaffold1396 |
69904 |
70055 |
- |
PL726 |
Unspecified |