scaffold14116 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold14116 |
1411 |
1518 |
+ |
RS14282 |
Unspecified |
| scaffold14116 |
2408 |
2435 |
+ |
(T)n |
Simple_repeat |
| scaffold14116 |
2681 |
2716 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold14116 |
4621 |
4655 |
+ |
(TTGAACT)n |
Simple_repeat |
| scaffold14116 |
6198 |
6232 |
+ |
A-rich |
Low_complexity |
| scaffold14116 |
6490 |
6532 |
+ |
(TTT)n |
Simple_repeat |
| scaffold14116 |
7291 |
7590 |
- |
RS513 |
Unspecified |
| scaffold14116 |
7693 |
8692 |
+ |
RS15463 |
Unspecified |
| scaffold14116 |
8888 |
9152 |
- |
RS356 |
Unspecified |
| scaffold14116 |
9311 |
9704 |
+ |
PL69 |
Unspecified |
| scaffold14116 |
9733 |
9914 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold14116 |
10176 |
10475 |
- |
RS513 |
Unspecified |
| scaffold14116 |
10578 |
11577 |
+ |
RS15463 |
Unspecified |
| scaffold14116 |
11782 |
12046 |
- |
RS356 |
Unspecified |
| scaffold14116 |
12760 |
12798 |
+ |
(ATTATA)n |
Simple_repeat |
| scaffold14116 |
12865 |
12903 |
+ |
A-rich |
Low_complexity |
| scaffold14116 |
13511 |
13549 |
+ |
(TTATTGT)n |
Simple_repeat |
| scaffold14116 |
13715 |
13748 |
+ |
(AAT)n |
Simple_repeat |
| scaffold14116 |
13749 |
13780 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14116 |
14343 |
14853 |
+ |
PL637 |
Unspecified |
| scaffold14116 |
15347 |
15492 |
+ |
RS12954 |
Unspecified |
| scaffold14116 |
16244 |
16466 |
+ |
RS9761 |
Unspecified |
| scaffold14116 |
16639 |
16711 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold14116 |
16712 |
16923 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold14116 |
16957 |
16994 |
+ |
(AATATAC)n |
Simple_repeat |
| scaffold14116 |
18104 |
18249 |
+ |
RS12954 |
Unspecified |
| scaffold14116 |
19248 |
19468 |
+ |
RS9761 |
Unspecified |
| scaffold14116 |
19511 |
19567 |
- |
RS14970 |
Unspecified |
| scaffold14116 |
19524 |
19618 |
+ |
RS16382 |
Unspecified |
| scaffold14116 |
20519 |
20556 |
+ |
(CTACAT)n |
Simple_repeat |
| scaffold14116 |
24250 |
24270 |
+ |
(AG)n |
Simple_repeat |
| scaffold14116 |
27285 |
27311 |
+ |
(T)n |
Simple_repeat |
| scaffold14116 |
27402 |
27434 |
+ |
(TTGAT)n |
Simple_repeat |
| scaffold14116 |
27534 |
27566 |
+ |
(TGTGT)n |
Simple_repeat |
| scaffold14116 |
27631 |
27669 |
+ |
A-rich |
Low_complexity |
| scaffold14116 |
28270 |
28413 |
+ |
RS613 |
Unspecified |
| scaffold14116 |
28367 |
28426 |
+ |
RS14955 |
Unspecified |
| scaffold14116 |
29337 |
29374 |
+ |
(T)n |
Simple_repeat |
| scaffold14116 |
29558 |
29600 |
+ |
(TATTAAT)n |
Simple_repeat |
| scaffold14116 |
29697 |
29737 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold14116 |
29903 |
29996 |
- |
RS16382 |
Unspecified |
| scaffold14116 |
30256 |
30267 |
- |
LT1_EPa |
LTR? |
| scaffold14116 |
30268 |
30359 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold14116 |
30909 |
30959 |
+ |
(TGATAA)n |
Simple_repeat |
| scaffold14116 |
31105 |
31139 |
+ |
(TAA)n |
Simple_repeat |
| scaffold14116 |
31724 |
31753 |
+ |
(A)n |
Simple_repeat |
| scaffold14116 |
31754 |
31781 |
+ |
A-rich |
Low_complexity |
| scaffold14116 |
34858 |
35016 |
- |
Gypsy-13_ST-I |
LTR/Gypsy |
| scaffold14116 |
35603 |
35640 |
+ |
A-rich |
Low_complexity |
| scaffold14116 |
36513 |
36564 |
+ |
A-rich |
Low_complexity |
| scaffold14116 |
37238 |
37299 |
+ |
(TTAAAAT)n |
Simple_repeat |
| scaffold14116 |
38470 |
38492 |
+ |
(A)n |
Simple_repeat |
| scaffold14116 |
38703 |
38772 |
+ |
(TATTAAC)n |
Simple_repeat |
| scaffold14116 |
39368 |
39471 |
+ |
(TAT)n |
Simple_repeat |
| scaffold14116 |
41900 |
41963 |
+ |
A-rich |
Low_complexity |
| scaffold14116 |
42277 |
42297 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold14116 |
42315 |
42346 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold14116 |
42368 |
42628 |
- |
RS1 |
Unspecified |
| scaffold14116 |
42534 |
42678 |
+ |
RS16358 |
Unspecified |
| scaffold14116 |
43141 |
43167 |
+ |
(A)n |
Simple_repeat |
| scaffold14116 |
45068 |
45164 |
- |
RS13610 |
Unspecified |
| scaffold14116 |
45373 |
45473 |
+ |
A-rich |
Low_complexity |
| scaffold14116 |
45891 |
45967 |
+ |
(TTGTAT)n |
Simple_repeat |
| scaffold14116 |
50631 |
50687 |
+ |
(TG)n |
Simple_repeat |
| scaffold14116 |
54861 |
54937 |
+ |
GA-rich |
Low_complexity |
| scaffold14116 |
59599 |
59626 |
+ |
(A)n |
Simple_repeat |
| scaffold14116 |
59641 |
59683 |
+ |
RS4850 |
Unspecified |
| scaffold14116 |
59958 |
59974 |
+ |
(T)n |
Simple_repeat |
| scaffold14116 |
60033 |
60071 |
+ |
A-rich |
Low_complexity |
| scaffold14116 |
61634 |
61672 |
+ |
A-rich |
Low_complexity |
| scaffold14116 |
61679 |
61775 |
+ |
RS454 |
Unspecified |
| scaffold14116 |
61778 |
61858 |
- |
RS1663 |
Unspecified |
| scaffold14116 |
61858 |
61970 |
- |
PL24 |
Unspecified |
| scaffold14116 |
62013 |
62079 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold14116 |
62145 |
62250 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold14116 |
64073 |
64180 |
+ |
RS7372 |
Unspecified |
| scaffold14116 |
64173 |
64277 |
+ |
RS6445 |
Unspecified |
| scaffold14116 |
64463 |
64953 |
- |
RS2828 |
Unspecified |
| scaffold14116 |
65368 |
65428 |
- |
RS4529 |
Unspecified |
| scaffold14116 |
66126 |
66178 |
+ |
(A)n |
Simple_repeat |
| scaffold14116 |
66207 |
66253 |
+ |
(CGCCGG)n |
Simple_repeat |
| scaffold14116 |
66353 |
66376 |
+ |
(CCACCG)n |
Simple_repeat |
| scaffold14116 |
66377 |
66404 |
+ |
(CACCTC)n |
Simple_repeat |
| scaffold14116 |
66405 |
66414 |
+ |
(CCACCG)n |
Simple_repeat |
| scaffold14116 |
66927 |
66968 |
+ |
(ACGATTT)n |
Simple_repeat |
| scaffold14116 |
68715 |
68843 |
+ |
RS11954 |
Unspecified |
| scaffold14116 |
72502 |
72541 |
+ |
(ACA)n |
Simple_repeat |
| scaffold14116 |
72888 |
72926 |
+ |
(ATGTTA)n |
Simple_repeat |
| scaffold14116 |
72927 |
72963 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold14116 |
72964 |
72981 |
+ |
(ATGTTA)n |
Simple_repeat |
| scaffold14116 |
72999 |
73030 |
+ |
(ATGTGTA)n |
Simple_repeat |
| scaffold14116 |
73173 |
73251 |
+ |
RS365 |
Unspecified |
| scaffold14116 |
73717 |
73759 |
+ |
(ATATTT)n |
Simple_repeat |
| scaffold14116 |
74065 |
74101 |
+ |
RS622 |
Unspecified |
| scaffold14116 |
74576 |
74610 |
+ |
(A)n |
Simple_repeat |
| scaffold14116 |
74812 |
74926 |
+ |
RS622 |
Unspecified |
| scaffold14116 |
75118 |
75210 |
- |
RS4475 |
Unspecified |
| scaffold14116 |
76027 |
76088 |
+ |
(CTAAT)n |
Simple_repeat |
| scaffold14116 |
76107 |
76223 |
+ |
PL171 |
Unspecified |
| scaffold14116 |
76221 |
76400 |
+ |
PL171 |
Unspecified |
| scaffold14116 |
77148 |
77189 |
+ |
A-rich |
Low_complexity |
| scaffold14116 |
77189 |
77264 |
+ |
(ATTATT)n |
Simple_repeat |
| scaffold14116 |
78454 |
78547 |
+ |
(T)n |
Simple_repeat |
| scaffold14116 |
80493 |
80533 |
+ |
(A)n |
Simple_repeat |
| scaffold14116 |
80928 |
80979 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold14116 |
81628 |
81672 |
+ |
(CTACTTA)n |
Simple_repeat |
| scaffold14116 |
81999 |
82015 |
+ |
(TA)n |
Simple_repeat |
| scaffold14116 |
82399 |
82435 |
+ |
(AATT)n |
Simple_repeat |
| scaffold14116 |
83955 |
83991 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold14116 |
84714 |
84766 |
+ |
(TT)n |
Simple_repeat |
| scaffold14116 |
89561 |
89604 |
+ |
(CAC)n |
Simple_repeat |
| scaffold14116 |
89618 |
89640 |
+ |
(CTC)n |
Simple_repeat |
| scaffold14116 |
91614 |
91634 |
+ |
(A)n |
Simple_repeat |
| scaffold14116 |
92096 |
92419 |
- |
RS2386 |
Unspecified |
| scaffold14116 |
94256 |
94307 |
+ |
(ATG)n |
Simple_repeat |
| scaffold14116 |
95161 |
95219 |
+ |
(TCT)n |
Simple_repeat |
| scaffold14116 |
95428 |
95465 |
+ |
(TAT)n |
Simple_repeat |
| scaffold14116 |
102258 |
102490 |
+ |
PL653 |
Unspecified |
| scaffold14116 |
102767 |
102785 |
+ |
(T)n |
Simple_repeat |
| scaffold14116 |
105895 |
105918 |
+ |
(A)n |
Simple_repeat |
| scaffold14116 |
110734 |
110781 |
+ |
A-rich |
Low_complexity |
| scaffold14116 |
111104 |
111134 |
+ |
A-rich |
Low_complexity |
| scaffold14116 |
111826 |
111850 |
+ |
(A)n |
Simple_repeat |
| scaffold14116 |
112649 |
112700 |
+ |
(CAA)n |
Simple_repeat |
| scaffold14116 |
113205 |
113417 |
- |
PL271 |
Unspecified |
| scaffold14116 |
113707 |
113797 |
+ |
RS4475 |
Unspecified |
| scaffold14116 |
116466 |
116566 |
- |
RS4475 |
Unspecified |
| scaffold14116 |
116573 |
116784 |
- |
RS499 |
Unspecified |
| scaffold14116 |
116776 |
116945 |
- |
RS499 |
Unspecified |
| scaffold14116 |
117543 |
117589 |
+ |
(TAA)n |
Simple_repeat |
| scaffold14116 |
118036 |
118129 |
- |
RS4475 |
Unspecified |
| scaffold14116 |
120362 |
120403 |
+ |
(TA)n |
Simple_repeat |
| scaffold14116 |
122389 |
122413 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14116 |
123158 |
123335 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold14116 |
125103 |
125261 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold14116 |
125858 |
125894 |
+ |
(TCAATTAT)n |
Simple_repeat |
| scaffold14116 |
126302 |
126449 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold14116 |
126302 |
126350 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold14116 |
126341 |
126449 |
- |
PL523 |
Unspecified |
| scaffold14116 |
126500 |
126516 |
+ |
(A)n |
Simple_repeat |
| scaffold14116 |
129405 |
129428 |
+ |
(A)n |
Simple_repeat |
| scaffold14116 |
130219 |
130242 |
+ |
(CAA)n |
Simple_repeat |
| scaffold14116 |
130659 |
130698 |
+ |
(T)n |
Simple_repeat |
| scaffold14116 |
130716 |
130860 |
- |
RS41 |
Unspecified |
| scaffold14116 |
131004 |
131057 |
+ |
(TTTTT)n |
Simple_repeat |
| scaffold14116 |
131634 |
131744 |
- |
RS41 |
Unspecified |
| scaffold14116 |
131746 |
131815 |
+ |
RS2386 |
Unspecified |