scaffold1467 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1467 |
1 |
17 |
+ |
(T)n |
Simple_repeat |
| scaffold1467 |
322 |
407 |
- |
RS1043 |
Unspecified |
| scaffold1467 |
926 |
1039 |
+ |
GA-rich |
Low_complexity |
| scaffold1467 |
1122 |
1228 |
- |
PL154 |
Unspecified |
| scaffold1467 |
2095 |
2296 |
- |
RS11005 |
Unspecified |
| scaffold1467 |
2446 |
2730 |
- |
RS5029 |
Unspecified |
| scaffold1467 |
3610 |
3698 |
+ |
RS376 |
Unspecified |
| scaffold1467 |
3897 |
3997 |
+ |
A-rich |
Low_complexity |
| scaffold1467 |
4298 |
4385 |
+ |
PL621 |
Unspecified |
| scaffold1467 |
4387 |
4429 |
+ |
RS376 |
Unspecified |
| scaffold1467 |
4431 |
4678 |
+ |
RS4 |
Unspecified |
| scaffold1467 |
4769 |
5198 |
- |
PL637 |
Unspecified |
| scaffold1467 |
5302 |
5320 |
+ |
(A)n |
Simple_repeat |
| scaffold1467 |
5626 |
5662 |
+ |
(T)n |
Simple_repeat |
| scaffold1467 |
6677 |
6731 |
+ |
(GTCAAG)n |
Simple_repeat |
| scaffold1467 |
7169 |
7260 |
+ |
RS1610 |
Unspecified |
| scaffold1467 |
7835 |
7855 |
+ |
(A)n |
Simple_repeat |
| scaffold1467 |
11170 |
11194 |
+ |
(TTTTTG)n |
Simple_repeat |
| scaffold1467 |
12495 |
12582 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold1467 |
12792 |
12861 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold1467 |
12831 |
12892 |
+ |
(TTTCCAT)n |
Simple_repeat |
| scaffold1467 |
13580 |
13608 |
+ |
(T)n |
Simple_repeat |
| scaffold1467 |
13637 |
13734 |
- |
RS129 |
Unspecified |
| scaffold1467 |
13798 |
13944 |
+ |
(A)n |
Simple_repeat |
| scaffold1467 |
13919 |
13944 |
+ |
(A)n |
Simple_repeat |
| scaffold1467 |
13965 |
14000 |
+ |
(AATATA)n |
Simple_repeat |
| scaffold1467 |
14001 |
14011 |
+ |
A-rich |
Low_complexity |
| scaffold1467 |
14329 |
14383 |
- |
RS11821 |
Unspecified |
| scaffold1467 |
14399 |
14991 |
- |
RS604 |
Unspecified |
| scaffold1467 |
14993 |
15075 |
+ |
RS14977 |
Unspecified |
| scaffold1467 |
15200 |
15323 |
+ |
(TTTAAT)n |
Simple_repeat |
| scaffold1467 |
15422 |
15447 |
+ |
(A)n |
Simple_repeat |
| scaffold1467 |
15478 |
15722 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold1467 |
15902 |
16077 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold1467 |
16078 |
16132 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold1467 |
16312 |
16350 |
+ |
A-rich |
Low_complexity |
| scaffold1467 |
16837 |
16855 |
+ |
(A)n |
Simple_repeat |
| scaffold1467 |
17545 |
18002 |
- |
PL582 |
Unspecified |
| scaffold1467 |
18259 |
18338 |
+ |
RS1048 |
Unspecified |
| scaffold1467 |
18931 |
18967 |
+ |
A-rich |
Low_complexity |
| scaffold1467 |
19231 |
19963 |
+ |
Mariner-1_GM |
DNA/TcMar-Stowaway |
| scaffold1467 |
20229 |
20267 |
+ |
(ATGTA)n |
Simple_repeat |
| scaffold1467 |
20679 |
20821 |
- |
RS501 |
Unspecified |
| scaffold1467 |
21159 |
21487 |
- |
RS1142 |
Unspecified |
| scaffold1467 |
21374 |
22115 |
+ |
RS1235 |
Unspecified |
| scaffold1467 |
22538 |
22725 |
- |
RS3698 |
Unspecified |
| scaffold1467 |
22765 |
22980 |
- |
RS5215 |
Unspecified |
| scaffold1467 |
23523 |
23555 |
+ |
(TTACTC)n |
Simple_repeat |
| scaffold1467 |
23572 |
23666 |
- |
RS606 |
Unspecified |
| scaffold1467 |
24797 |
24839 |
+ |
(CTCATA)n |
Simple_repeat |
| scaffold1467 |
25868 |
25996 |
+ |
RS10164 |
Unspecified |
| scaffold1467 |
26091 |
26146 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold1467 |
26257 |
26290 |
+ |
(AATA)n |
Simple_repeat |
| scaffold1467 |
27305 |
27458 |
+ |
RS1009 |
Unspecified |
| scaffold1467 |
27692 |
27821 |
+ |
RS10164 |
Unspecified |
| scaffold1467 |
27927 |
27975 |
+ |
(TTTTTTG)n |
Simple_repeat |
| scaffold1467 |
28017 |
28058 |
+ |
(AATA)n |
Simple_repeat |
| scaffold1467 |
28105 |
28134 |
+ |
(TGTCT)n |
Simple_repeat |
| scaffold1467 |
28488 |
28660 |
- |
PL852 |
Unspecified |
| scaffold1467 |
28581 |
28859 |
- |
PL852 |
Unspecified |
| scaffold1467 |
28872 |
28898 |
+ |
(TCC)n |
Simple_repeat |
| scaffold1467 |
29736 |
29770 |
+ |
(TCC)n |
Simple_repeat |
| scaffold1467 |
30033 |
30077 |
+ |
(TTTTCC)n |
Simple_repeat |
| scaffold1467 |
30145 |
30199 |
+ |
(AATA)n |
Simple_repeat |
| scaffold1467 |
30227 |
30258 |
+ |
(TGTCT)n |
Simple_repeat |
| scaffold1467 |
30259 |
30297 |
+ |
(CAATTGA)n |
Simple_repeat |
| scaffold1467 |
30298 |
30307 |
+ |
(TGTCT)n |
Simple_repeat |
| scaffold1467 |
30573 |
30619 |
+ |
A-rich |
Low_complexity |
| scaffold1467 |
32837 |
32931 |
- |
RS6614 |
Unspecified |
| scaffold1467 |
34141 |
34296 |
+ |
GA-rich |
Low_complexity |
| scaffold1467 |
35408 |
36889 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold1467 |
35515 |
35607 |
- |
LINE1-12_SBi |
LINE/L1 |
| scaffold1467 |
35762 |
36525 |
- |
L1-1_GM |
LINE/L1 |
| scaffold1467 |
37288 |
37319 |
- |
L1-15_GM |
LINE/L1 |
| scaffold1467 |
38712 |
38728 |
+ |
(T)n |
Simple_repeat |
| scaffold1467 |
39707 |
39816 |
+ |
RS8522 |
Unspecified |
| scaffold1467 |
40011 |
40104 |
- |
RS4 |
Unspecified |
| scaffold1467 |
41076 |
41131 |
+ |
(T)n |
Simple_repeat |
| scaffold1467 |
44066 |
44114 |
+ |
A-rich |
Low_complexity |
| scaffold1467 |
44454 |
44611 |
- |
RS5579 |
Unspecified |
| scaffold1467 |
44655 |
45079 |
+ |
RS2556 |
Unspecified |
| scaffold1467 |
44965 |
45273 |
- |
RS3645 |
Unspecified |
| scaffold1467 |
45071 |
45676 |
- |
RS3867 |
Unspecified |
| scaffold1467 |
46181 |
46205 |
+ |
(TGT)n |
Simple_repeat |
| scaffold1467 |
46562 |
46826 |
- |
RS4477 |
Unspecified |
| scaffold1467 |
46707 |
46885 |
- |
RS4124 |
Unspecified |
| scaffold1467 |
47288 |
47411 |
- |
RS250 |
Unspecified |
| scaffold1467 |
47956 |
48055 |
+ |
(AATTC)n |
Simple_repeat |
| scaffold1467 |
48219 |
48262 |
+ |
(TGG)n |
Simple_repeat |
| scaffold1467 |
48219 |
48392 |
+ |
(TGG)n |
Simple_repeat |
| scaffold1467 |
48257 |
48392 |
- |
RS5240 |
Unspecified |
| scaffold1467 |
48776 |
48858 |
+ |
PL669 |
Unspecified |
| scaffold1467 |
48780 |
48869 |
- |
PL380 |
Unspecified |
| scaffold1467 |
49221 |
49253 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1467 |
49513 |
49542 |
+ |
(CTCGAG)n |
Simple_repeat |
| scaffold1467 |
49904 |
50029 |
+ |
RS1305 |
Unspecified |
| scaffold1467 |
50035 |
50280 |
- |
RS356 |
Unspecified |
| scaffold1467 |
50327 |
50347 |
+ |
(A)n |
Simple_repeat |
| scaffold1467 |
50558 |
50715 |
- |
RS5579 |
Unspecified |
| scaffold1467 |
50761 |
51183 |
+ |
RS2556 |
Unspecified |
| scaffold1467 |
51069 |
51377 |
- |
RS3645 |
Unspecified |
| scaffold1467 |
51175 |
51779 |
- |
RS3867 |
Unspecified |
| scaffold1467 |
51801 |
51836 |
+ |
(TCAGC)n |
Simple_repeat |
| scaffold1467 |
51854 |
51922 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold1467 |
52455 |
52500 |
+ |
(TGT)n |
Simple_repeat |
| scaffold1467 |
52455 |
52752 |
+ |
(TGT)n |
Simple_repeat |
| scaffold1467 |
52485 |
52752 |
- |
RS3507 |
Unspecified |
| scaffold1467 |
52803 |
53057 |
- |
RS4477 |
Unspecified |
| scaffold1467 |
52938 |
53117 |
- |
RS4124 |
Unspecified |
| scaffold1467 |
53515 |
53634 |
- |
RS250 |
Unspecified |
| scaffold1467 |
54397 |
54414 |
+ |
(T)n |
Simple_repeat |
| scaffold1467 |
55065 |
55120 |
+ |
RS7374 |
Unspecified |
| scaffold1467 |
55228 |
55245 |
+ |
(A)n |
Simple_repeat |
| scaffold1467 |
55432 |
55589 |
- |
RS5579 |
Unspecified |
| scaffold1467 |
55615 |
56039 |
+ |
RS2556 |
Unspecified |
| scaffold1467 |
55925 |
56233 |
- |
RS3645 |
Unspecified |
| scaffold1467 |
56031 |
56635 |
- |
RS3867 |
Unspecified |
| scaffold1467 |
56701 |
56968 |
- |
RS3507 |
Unspecified |
| scaffold1467 |
57037 |
57297 |
- |
RS4477 |
Unspecified |
| scaffold1467 |
57178 |
57366 |
- |
RS4124 |
Unspecified |
| scaffold1467 |
57646 |
57732 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold1467 |
57721 |
57862 |
+ |
(AATTTAA)n |
Simple_repeat |
| scaffold1467 |
57777 |
57869 |
+ |
A-rich |
Low_complexity |
| scaffold1467 |
58767 |
58795 |
+ |
(CAA)n |
Simple_repeat |
| scaffold1467 |
60025 |
60103 |
- |
PL517 |
Unspecified |
| scaffold1467 |
60038 |
60118 |
- |
PL517 |
Unspecified |
| scaffold1467 |
60523 |
60655 |
+ |
(A)n |
Simple_repeat |
| scaffold1467 |
60636 |
60655 |
+ |
(A)n |
Simple_repeat |
| scaffold1467 |
62331 |
62514 |
+ |
RS3698 |
Unspecified |
| scaffold1467 |
62697 |
62722 |
+ |
(A)n |
Simple_repeat |
| scaffold1467 |
62934 |
63030 |
- |
RS5579 |
Unspecified |
| scaffold1467 |
63045 |
63074 |
+ |
A-rich |
Low_complexity |
| scaffold1467 |
63771 |
63814 |
+ |
A-rich |
Low_complexity |
| scaffold1467 |
64223 |
64453 |
- |
RS1231 |
Unspecified |
| scaffold1467 |
64740 |
64786 |
- |
RS1048 |
Unspecified |
| scaffold1467 |
64926 |
65083 |
- |
RS5579 |
Unspecified |
| scaffold1467 |
65127 |
65542 |
+ |
RS2556 |
Unspecified |
| scaffold1467 |
65428 |
65736 |
- |
RS3645 |
Unspecified |
| scaffold1467 |
65534 |
66137 |
- |
RS3867 |
Unspecified |
| scaffold1467 |
66523 |
66790 |
- |
RS3507 |
Unspecified |
| scaffold1467 |
66805 |
66826 |
+ |
(A)n |
Simple_repeat |
| scaffold1467 |
66833 |
66957 |
- |
RS4477 |
Unspecified |
| scaffold1467 |
67252 |
67274 |
+ |
(TGT)n |
Simple_repeat |
| scaffold1467 |
67554 |
67827 |
- |
RS4477 |
Unspecified |
| scaffold1467 |
67699 |
67887 |
- |
RS4124 |
Unspecified |
| scaffold1467 |
68476 |
68570 |
+ |
RS4475 |
Unspecified |
| scaffold1467 |
68481 |
68583 |
- |
PL436 |
Unspecified |
| scaffold1467 |
68689 |
68746 |
+ |
(TTTTAG)n |
Simple_repeat |
| scaffold1467 |
68911 |
68932 |
+ |
(A)n |
Simple_repeat |
| scaffold1467 |
69197 |
69241 |
+ |
(CATTAA)n |
Simple_repeat |
| scaffold1467 |
71028 |
71139 |
+ |
RS1189 |
Unspecified |
| scaffold1467 |
71172 |
71568 |
- |
RS1876 |
Unspecified |
| scaffold1467 |
71753 |
71781 |
+ |
A-rich |
Low_complexity |
| scaffold1467 |
71789 |
71900 |
- |
RS8385 |
Unspecified |
| scaffold1467 |
72079 |
72228 |
- |
RS12324 |
Unspecified |
| scaffold1467 |
72364 |
73290 |
- |
Copia-75_GM-I |
LTR/Copia |
| scaffold1467 |
74558 |
74733 |
- |
RS2160 |
Unspecified |
| scaffold1467 |
74928 |
74951 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1467 |
75383 |
75729 |
- |
RS8 |
Unspecified |
| scaffold1467 |
76129 |
77409 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1467 |
76430 |
77289 |
- |
Copia-75_GM-I |
LTR/Copia |
| scaffold1467 |
77415 |
77595 |
- |
RS193 |
Unspecified |
| scaffold1467 |
77966 |
78146 |
- |
RS5 |
Unspecified |
| scaffold1467 |
78356 |
78585 |
- |
RS18 |
Unspecified |
| scaffold1467 |
78905 |
78940 |
+ |
A-rich |
Low_complexity |