scaffold153 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold153 |
221 |
250 |
+ |
(TTG)n |
Simple_repeat |
| scaffold153 |
1337 |
1370 |
+ |
(CTTT)n |
Simple_repeat |
| scaffold153 |
3167 |
3536 |
- |
RS8 |
Unspecified |
| scaffold153 |
3880 |
3987 |
+ |
RS8430 |
Unspecified |
| scaffold153 |
4183 |
4371 |
+ |
RS614 |
Unspecified |
| scaffold153 |
4959 |
5066 |
+ |
RS8430 |
Unspecified |
| scaffold153 |
5326 |
5378 |
+ |
(AT)n |
Simple_repeat |
| scaffold153 |
5653 |
5747 |
- |
PL572 |
Unspecified |
| scaffold153 |
5653 |
5736 |
+ |
PL269 |
Unspecified |
| scaffold153 |
5955 |
6007 |
+ |
(AT)n |
Simple_repeat |
| scaffold153 |
6344 |
6396 |
+ |
(AT)n |
Simple_repeat |
| scaffold153 |
6928 |
6993 |
+ |
(TTACAA)n |
Simple_repeat |
| scaffold153 |
7209 |
7229 |
+ |
A-rich |
Low_complexity |
| scaffold153 |
7230 |
7249 |
+ |
(AC)n |
Simple_repeat |
| scaffold153 |
7658 |
7801 |
+ |
RS47 |
Unspecified |
| scaffold153 |
7748 |
7821 |
- |
RS16831 |
Unspecified |
| scaffold153 |
10126 |
10172 |
+ |
RS18111 |
Unspecified |
| scaffold153 |
10793 |
10975 |
- |
RS4361 |
Unspecified |
| scaffold153 |
11714 |
11853 |
+ |
RS11447 |
Unspecified |
| scaffold153 |
11764 |
11867 |
+ |
RS14638 |
Unspecified |
| scaffold153 |
13048 |
13217 |
+ |
RS138 |
Unspecified |
| scaffold153 |
13217 |
13288 |
- |
RS666 |
Unspecified |
| scaffold153 |
13478 |
13525 |
- |
Copia-80_PT-I |
LTR/Copia |
| scaffold153 |
13523 |
13859 |
- |
PL179 |
Unspecified |
| scaffold153 |
13862 |
14004 |
+ |
RS2100 |
Unspecified |
| scaffold153 |
13938 |
14103 |
+ |
RS2015 |
Unspecified |
| scaffold153 |
13969 |
14120 |
- |
RS1159 |
Unspecified |
| scaffold153 |
14050 |
14386 |
+ |
RS2015 |
Unspecified |
| scaffold153 |
14386 |
14550 |
- |
RS138 |
Unspecified |
| scaffold153 |
14559 |
14738 |
- |
PL700 |
Unspecified |
| scaffold153 |
15113 |
15251 |
+ |
RS11447 |
Unspecified |
| scaffold153 |
15162 |
15265 |
+ |
RS14638 |
Unspecified |
| scaffold153 |
16100 |
16365 |
+ |
RS214 |
Unspecified |
| scaffold153 |
16550 |
16624 |
+ |
RS750 |
Unspecified |
| scaffold153 |
16831 |
16850 |
+ |
(GTAT)n |
Simple_repeat |
| scaffold153 |
17588 |
17672 |
- |
RS522 |
Unspecified |
| scaffold153 |
17965 |
18000 |
+ |
(TTCC)n |
Simple_repeat |
| scaffold153 |
18121 |
18189 |
- |
RS86 |
Unspecified |
| scaffold153 |
18196 |
18227 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold153 |
18396 |
18423 |
+ |
A-rich |
Low_complexity |
| scaffold153 |
22243 |
22922 |
- |
Gypsy-74_PTr-I |
LTR/Gypsy |
| scaffold153 |
22862 |
22922 |
- |
Gypsy-74_PTr-I |
LTR/Gypsy |
| scaffold153 |
22948 |
23055 |
+ |
RS6754 |
Unspecified |
| scaffold153 |
23078 |
23499 |
+ |
RS14393 |
Unspecified |
| scaffold153 |
23522 |
23620 |
+ |
RS2103 |
Unspecified |
| scaffold153 |
23569 |
24211 |
+ |
PL853 |
Unspecified |
| scaffold153 |
27057 |
27172 |
+ |
RS15383 |
Unspecified |
| scaffold153 |
28153 |
28175 |
+ |
(T)n |
Simple_repeat |
| scaffold153 |
29445 |
29477 |
+ |
(CGGACA)n |
Simple_repeat |
| scaffold153 |
30076 |
30111 |
+ |
(TATT)n |
Simple_repeat |
| scaffold153 |
30256 |
30330 |
+ |
ATHATN4 |
DNA/hAT-Ac |
| scaffold153 |
32249 |
32360 |
- |
RS12788 |
Unspecified |
| scaffold153 |
32429 |
32457 |
+ |
(TTA)n |
Simple_repeat |
| scaffold153 |
32458 |
32485 |
+ |
(TATT)n |
Simple_repeat |
| scaffold153 |
32657 |
32697 |
+ |
(CCGGAC)n |
Simple_repeat |
| scaffold153 |
35841 |
35890 |
+ |
(TTGTCG)n |
Simple_repeat |
| scaffold153 |
36314 |
36353 |
+ |
(AACATT)n |
Simple_repeat |
| scaffold153 |
36893 |
36921 |
+ |
(TAT)n |
Simple_repeat |
| scaffold153 |
36922 |
36955 |
+ |
(TTG)n |
Simple_repeat |
| scaffold153 |
37554 |
37594 |
+ |
A-rich |
Low_complexity |
| scaffold153 |
37598 |
37633 |
+ |
(ATATTA)n |
Simple_repeat |
| scaffold153 |
37719 |
37768 |
+ |
(TTTTT)n |
Simple_repeat |
| scaffold153 |
38088 |
38446 |
+ |
RS16638 |
Unspecified |
| scaffold153 |
38579 |
38755 |
+ |
RS9929 |
Unspecified |
| scaffold153 |
39377 |
39769 |
+ |
RS13291 |
Unspecified |
| scaffold153 |
39829 |
39873 |
+ |
(CACAA)n |
Simple_repeat |
| scaffold153 |
43265 |
43410 |
+ |
RS17783 |
Unspecified |
| scaffold153 |
43415 |
43553 |
+ |
RS17314 |
Unspecified |
| scaffold153 |
43574 |
43678 |
+ |
RS15675 |
Unspecified |
| scaffold153 |
43703 |
43958 |
+ |
RS16524 |
Unspecified |
| scaffold153 |
44389 |
44559 |
+ |
RS17923 |
Unspecified |
| scaffold153 |
44657 |
44782 |
+ |
RS16097 |
Unspecified |
| scaffold153 |
45360 |
45675 |
+ |
(ACGTG)n |
Simple_repeat |
| scaffold153 |
45360 |
45415 |
+ |
(ACGTG)n |
Simple_repeat |
| scaffold153 |
45388 |
45675 |
+ |
RS13284 |
Unspecified |
| scaffold153 |
45504 |
46498 |
+ |
RS17648 |
Unspecified |
| scaffold153 |
47341 |
47368 |
+ |
(TCA)n |
Simple_repeat |
| scaffold153 |
47453 |
47552 |
+ |
RS16680 |
Unspecified |
| scaffold153 |
47752 |
47855 |
+ |
RS18277 |
Unspecified |
| scaffold153 |
48312 |
48649 |
+ |
RS13992 |
Unspecified |
| scaffold153 |
48508 |
48705 |
+ |
RS18404 |
Unspecified |
| scaffold153 |
49040 |
49156 |
+ |
RS16107 |
Unspecified |
| scaffold153 |
49166 |
49243 |
+ |
A-rich |
Low_complexity |
| scaffold153 |
50216 |
50339 |
+ |
RS4 |
Unspecified |
| scaffold153 |
50342 |
50383 |
+ |
RS4 |
Unspecified |
| scaffold153 |
50792 |
50984 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold153 |
51714 |
51843 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold153 |
52007 |
52109 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold153 |
54148 |
54268 |
+ |
RS5651 |
Unspecified |
| scaffold153 |
54401 |
54628 |
+ |
RS13120 |
Unspecified |
| scaffold153 |
54707 |
54858 |
+ |
RS13526 |
Unspecified |
| scaffold153 |
54908 |
54996 |
+ |
PL700 |
Unspecified |
| scaffold153 |
54994 |
55120 |
+ |
PL622 |
Unspecified |
| scaffold153 |
55133 |
55488 |
+ |
PL622 |
Unspecified |
| scaffold153 |
55544 |
55582 |
+ |
RS148 |
Unspecified |
| scaffold153 |
55639 |
55684 |
+ |
A-rich |
Low_complexity |
| scaffold153 |
56513 |
56579 |
+ |
(T)n |
Simple_repeat |
| scaffold153 |
56810 |
57144 |
- |
RS4466 |
Unspecified |
| scaffold153 |
57939 |
58200 |
+ |
RS756 |
Unspecified |
| scaffold153 |
58201 |
58942 |
- |
PL733 |
Unspecified |
| scaffold153 |
58857 |
59103 |
+ |
RS62 |
Unspecified |
| scaffold153 |
58908 |
59146 |
- |
RS2931 |
Unspecified |
| scaffold153 |
59033 |
59379 |
- |
RS2108 |
Unspecified |
| scaffold153 |
59394 |
59497 |
- |
HARB-4_Mad |
DNA/PIF-Harbinger |
| scaffold153 |
59406 |
59763 |
- |
Novosib-6_CR |
DNA/Novosib |
| scaffold153 |
60766 |
60824 |
+ |
(T)n |
Simple_repeat |
| scaffold153 |
61186 |
61546 |
+ |
PL709 |
Unspecified |
| scaffold153 |
61919 |
62158 |
+ |
PL755 |
Unspecified |
| scaffold153 |
61980 |
62429 |
- |
PL78 |
Unspecified |
| scaffold153 |
62081 |
62484 |
- |
RS78 |
Unspecified |
| scaffold153 |
62703 |
62743 |
+ |
A-rich |
Low_complexity |
| scaffold153 |
67101 |
67145 |
+ |
(AACTAA)n |
Simple_repeat |
| scaffold153 |
67239 |
67277 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold153 |
67755 |
67868 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold153 |
67891 |
67979 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold153 |
68032 |
68214 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold153 |
68695 |
68903 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold153 |
69174 |
69365 |
- |
RS8079 |
Unspecified |
| scaffold153 |
69357 |
72554 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold153 |
72611 |
73402 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold153 |
72920 |
73125 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold153 |
73518 |
73549 |
+ |
(ATTGA)n |
Simple_repeat |
| scaffold153 |
73874 |
73897 |
+ |
(T)n |
Simple_repeat |
| scaffold153 |
74152 |
74263 |
+ |
RS8753 |
Unspecified |
| scaffold153 |
74581 |
74616 |
+ |
(TTTTAAT)n |
Simple_repeat |
| scaffold153 |
75647 |
76630 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold153 |
76080 |
76263 |
- |
SHAMUDRA_MT |
DNA/MULE-MuDR |
| scaffold153 |
76446 |
76519 |
- |
MuDR-7_Mad |
DNA/MULE-MuDR |
| scaffold153 |
76934 |
77352 |
- |
MuDR-1_PD |
DNA/MULE-MuDR |
| scaffold153 |
77416 |
77564 |
- |
MuDR-7_VV |
DNA/MULE-MuDR |
| scaffold153 |
78276 |
78318 |
+ |
(TCATCT)n |
Simple_repeat |
| scaffold153 |
78415 |
78465 |
+ |
(TTTTGTC)n |
Simple_repeat |
| scaffold153 |
78441 |
78475 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold153 |
79432 |
79482 |
+ |
(TTTCAA)n |
Simple_repeat |
| scaffold153 |
79835 |
79946 |
- |
RS8753 |
Unspecified |
| scaffold153 |
82372 |
82403 |
+ |
(TCTTTT)n |
Simple_repeat |
| scaffold153 |
83383 |
83412 |
+ |
(A)n |
Simple_repeat |
| scaffold153 |
83709 |
83829 |
+ |
RS3193 |
Unspecified |
| scaffold153 |
84936 |
85064 |
+ |
(AATGAA)n |
Simple_repeat |
| scaffold153 |
85145 |
85488 |
- |
RS1922 |
Unspecified |
| scaffold153 |
85480 |
85552 |
- |
RS1922 |
Unspecified |
| scaffold153 |
86046 |
86248 |
+ |
RS7826 |
Unspecified |
| scaffold153 |
87558 |
87676 |
+ |
RS6553 |
Unspecified |
| scaffold153 |
87819 |
87850 |
+ |
(GAACCG)n |
Simple_repeat |
| scaffold153 |
87865 |
88040 |
- |
RS9294 |
Unspecified |
| scaffold153 |
88281 |
88510 |
+ |
(GGTTCA)n |
Simple_repeat |
| scaffold153 |
88438 |
88510 |
+ |
(GGTTCA)n |
Simple_repeat |
| scaffold153 |
88639 |
88757 |
- |
RS6553 |
Unspecified |
| scaffold153 |
90061 |
90263 |
- |
RS7826 |
Unspecified |
| scaffold153 |
90586 |
90611 |
+ |
(T)n |
Simple_repeat |
| scaffold153 |
91694 |
91723 |
+ |
(TATC)n |
Simple_repeat |
| scaffold153 |
91957 |
91989 |
+ |
A-rich |
Low_complexity |
| scaffold153 |
92004 |
92233 |
- |
RS1764 |
Unspecified |
| scaffold153 |
92873 |
93093 |
+ |
(TATAATA)n |
Simple_repeat |
| scaffold153 |
92874 |
93093 |
+ |
(TATAATA)n |
Simple_repeat |
| scaffold153 |
92967 |
93093 |
+ |
(TATAATA)n |
Simple_repeat |
| scaffold153 |
93603 |
93622 |
+ |
(A)n |
Simple_repeat |
| scaffold153 |
93603 |
93679 |
+ |
(A)n |
Simple_repeat |
| scaffold153 |
93618 |
93698 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold153 |
93663 |
93698 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold153 |
93903 |
94062 |
- |
RS1978 |
Unspecified |
| scaffold153 |
94052 |
94129 |
- |
RS1978 |
Unspecified |
| scaffold153 |
94153 |
94193 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold153 |
94200 |
94222 |
+ |
(T)n |
Simple_repeat |
| scaffold153 |
94703 |
94742 |
+ |
(TTTTAAT)n |
Simple_repeat |
| scaffold153 |
94756 |
95287 |
+ |
PL798 |
Unspecified |
| scaffold153 |
98590 |
98618 |
+ |
A-rich |
Low_complexity |
| scaffold153 |
101518 |
101593 |
+ |
(A)n |
Simple_repeat |
| scaffold153 |
101763 |
101816 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold153 |
104265 |
104320 |
+ |
(AACA)n |
Simple_repeat |
| scaffold153 |
106175 |
106222 |
+ |
A-rich |
Low_complexity |
| scaffold153 |
107239 |
107259 |
+ |
(A)n |
Simple_repeat |
| scaffold153 |
108687 |
108711 |
+ |
(A)n |
Simple_repeat |
| scaffold153 |
109548 |
109610 |
+ |
(A)n |
Simple_repeat |
| scaffold153 |
110139 |
111098 |
+ |
RS12933 |
Unspecified |
| scaffold153 |
111097 |
111359 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold153 |
111717 |
112150 |
- |
Gypsy-2_Pru-I |
LTR/Gypsy |
| scaffold153 |
111989 |
112150 |
- |
Gypsy-2_Pru-I |
LTR/Gypsy |
| scaffold153 |
112210 |
113241 |
- |
RS1460 |
Unspecified |
| scaffold153 |
113200 |
114717 |
- |
Gypsy-2_Pru-I |
LTR/Gypsy |
| scaffold153 |
114733 |
115051 |
- |
Gypsy-39_PT-I |
LTR/Gypsy |
| scaffold153 |
115384 |
115944 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold153 |
118975 |
119010 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold153 |
119334 |
119392 |
- |
Gypsy-9_Mad-I |
LTR/Gypsy |
| scaffold153 |
119640 |
119691 |
+ |
(T)n |
Simple_repeat |
| scaffold153 |
120538 |
120569 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold153 |
120746 |
122011 |
- |
RS49 |
Unspecified |
| scaffold153 |
122567 |
123098 |
- |
ATHILA-5_SBi-I |
LTR/Gypsy |
| scaffold153 |
124072 |
124161 |
- |
ATHILA-5_SBi-I |
LTR/Gypsy |
| scaffold153 |
126069 |
126104 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold153 |
126897 |
126923 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold153 |
126931 |
126969 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold153 |
127424 |
127707 |
+ |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold153 |
128172 |
128204 |
+ |
(CAA)n |
Simple_repeat |
| scaffold153 |
128810 |
129162 |
+ |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold153 |
129515 |
129591 |
+ |
(CCA)n |
Simple_repeat |
| scaffold153 |
133184 |
133211 |
+ |
(TA)n |
Simple_repeat |
| scaffold153 |
137705 |
137800 |
+ |
(TA)n |
Simple_repeat |
| scaffold153 |
138485 |
138514 |
+ |
(T)n |
Simple_repeat |
| scaffold153 |
139369 |
139419 |
- |
L1-2_STu |
LINE/L1 |
| scaffold153 |
139637 |
139680 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold153 |
141112 |
141156 |
+ |
(TTATGTA)n |
Simple_repeat |
| scaffold153 |
142255 |
142928 |
- |
RS254 |
Unspecified |
| scaffold153 |
143898 |
145456 |
- |
RS254 |
Unspecified |
| scaffold153 |
145498 |
145585 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold153 |
146749 |
146820 |
+ |
(TTGTCT)n |
Simple_repeat |
| scaffold153 |
336711 |
336766 |
+ |
(ATCAT)n |
Simple_repeat |