scaffold1533 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1533 |
27 |
112 |
- |
Copia-4_GM-I |
LTR/Copia |
| scaffold1533 |
154 |
397 |
- |
RS7971 |
Unspecified |
| scaffold1533 |
576 |
635 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold1533 |
1676 |
1966 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold1533 |
2054 |
2090 |
+ |
(T)n |
Simple_repeat |
| scaffold1533 |
2118 |
2211 |
+ |
RS1162 |
Unspecified |
| scaffold1533 |
2149 |
2221 |
- |
RS656 |
Unspecified |
| scaffold1533 |
2295 |
2585 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold1533 |
2796 |
3280 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold1533 |
3011 |
3280 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold1533 |
3342 |
3364 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold1533 |
3365 |
3408 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold1533 |
3409 |
3433 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold1533 |
3675 |
3708 |
+ |
(T)n |
Simple_repeat |
| scaffold1533 |
3735 |
3829 |
+ |
RS1162 |
Unspecified |
| scaffold1533 |
3766 |
3838 |
- |
RS656 |
Unspecified |
| scaffold1533 |
4555 |
4880 |
- |
PL589 |
Unspecified |
| scaffold1533 |
4909 |
4971 |
- |
Copia22-VV_I-int |
LTR/Copia |
| scaffold1533 |
5251 |
5287 |
- |
Copia22-VV_I-int |
LTR/Copia |
| scaffold1533 |
5559 |
5701 |
+ |
PL589 |
Unspecified |
| scaffold1533 |
6098 |
6159 |
+ |
(TTC)n |
Simple_repeat |
| scaffold1533 |
6148 |
6190 |
+ |
(TTATTAA)n |
Simple_repeat |
| scaffold1533 |
7204 |
7353 |
+ |
PL289 |
Unspecified |
| scaffold1533 |
7352 |
7381 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1533 |
7895 |
7929 |
+ |
A-rich |
Low_complexity |
| scaffold1533 |
9054 |
9079 |
+ |
(T)n |
Simple_repeat |
| scaffold1533 |
9157 |
9235 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold1533 |
9553 |
9652 |
- |
PL380 |
Unspecified |
| scaffold1533 |
9632 |
10068 |
- |
PL762 |
Unspecified |
| scaffold1533 |
10581 |
10613 |
+ |
(AAAATAA)n |
Simple_repeat |
| scaffold1533 |
10657 |
10785 |
- |
RS14624 |
Unspecified |
| scaffold1533 |
10786 |
10948 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold1533 |
11172 |
11460 |
+ |
CACTA-P |
DNA/CMC-EnSpm |
| scaffold1533 |
11461 |
11489 |
+ |
(AACAA)n |
Simple_repeat |
| scaffold1533 |
11507 |
11541 |
+ |
(TTCA)n |
Simple_repeat |
| scaffold1533 |
11575 |
11665 |
+ |
(CAT)n |
Simple_repeat |
| scaffold1533 |
12154 |
12278 |
- |
RS3837 |
Unspecified |
| scaffold1533 |
12192 |
12295 |
- |
RS11905 |
Unspecified |
| scaffold1533 |
12785 |
12805 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold1533 |
14485 |
14542 |
- |
SHACOP6_I_MT-int |
LTR/Copia |
| scaffold1533 |
14858 |
14959 |
+ |
RS9266 |
Unspecified |
| scaffold1533 |
14964 |
15618 |
+ |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold1533 |
15462 |
15618 |
+ |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold1533 |
15486 |
15663 |
- |
EnSpm-18_SBi |
DNA/CMC-EnSpm |
| scaffold1533 |
15657 |
15830 |
+ |
RS17160 |
Unspecified |
| scaffold1533 |
15834 |
15949 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold1533 |
16014 |
16157 |
- |
RS511 |
Unspecified |
| scaffold1533 |
16648 |
16803 |
- |
RS2820 |
Unspecified |
| scaffold1533 |
17081 |
17130 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1533 |
17240 |
18949 |
- |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold1533 |
19270 |
19439 |
+ |
RS7535 |
Unspecified |
| scaffold1533 |
22009 |
23120 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold1533 |
23395 |
24048 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold1533 |
24749 |
24828 |
- |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold1533 |
25090 |
25291 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold1533 |
25747 |
25918 |
+ |
SHACOP15_LTR_MT |
LTR/Copia |
| scaffold1533 |
26768 |
26819 |
+ |
(GACTTT)n |
Simple_repeat |
| scaffold1533 |
27058 |
27079 |
+ |
(T)n |
Simple_repeat |
| scaffold1533 |
27267 |
27300 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold1533 |
28107 |
28492 |
- |
PL139 |
Unspecified |
| scaffold1533 |
74792 |
75056 |
+ |
RS4287 |
Unspecified |