scaffold1546 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1546 |
158 |
313 |
+ |
RS9678 |
Unspecified |
| scaffold1546 |
2533 |
2573 |
+ |
(CCATCA)n |
Simple_repeat |
| scaffold1546 |
4247 |
4283 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold1546 |
4552 |
4719 |
- |
RS3341 |
Unspecified |
| scaffold1546 |
4749 |
4833 |
- |
PL289 |
Unspecified |
| scaffold1546 |
4869 |
4936 |
- |
RS2663 |
Unspecified |
| scaffold1546 |
4931 |
5196 |
+ |
RS1943 |
Unspecified |
| scaffold1546 |
5250 |
5292 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold1546 |
5663 |
5750 |
+ |
(ATTAATA)n |
Simple_repeat |
| scaffold1546 |
5909 |
5942 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1546 |
6019 |
6053 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold1546 |
6242 |
6295 |
+ |
A-rich |
Low_complexity |
| scaffold1546 |
6673 |
6712 |
+ |
(T)n |
Simple_repeat |
| scaffold1546 |
7917 |
8366 |
- |
PL296 |
Unspecified |
| scaffold1546 |
8367 |
8498 |
- |
PL296 |
Unspecified |
| scaffold1546 |
8522 |
8550 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold1546 |
8866 |
8886 |
+ |
(T)n |
Simple_repeat |
| scaffold1546 |
11857 |
11887 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold1546 |
12365 |
12401 |
+ |
(CACCGT)n |
Simple_repeat |
| scaffold1546 |
14056 |
14212 |
+ |
RS9678 |
Unspecified |
| scaffold1546 |
14825 |
14926 |
- |
RS18316 |
Unspecified |
| scaffold1546 |
14840 |
14936 |
+ |
RS4475 |
Unspecified |
| scaffold1546 |
17890 |
17930 |
+ |
(ATGAAT)n |
Simple_repeat |
| scaffold1546 |
18857 |
18895 |
+ |
RS17600 |
Unspecified |
| scaffold1546 |
18919 |
18954 |
+ |
(TCGTT)n |
Simple_repeat |
| scaffold1546 |
19095 |
19131 |
+ |
RS10261 |
Unspecified |
| scaffold1546 |
22902 |
23069 |
+ |
(GGT)n |
Simple_repeat |
| scaffold1546 |
23108 |
23182 |
+ |
GA-rich |
Low_complexity |
| scaffold1546 |
24132 |
24197 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold1546 |
25124 |
25169 |
+ |
(CCCTTCT)n |
Simple_repeat |
| scaffold1546 |
25889 |
25939 |
+ |
(ATGATTT)n |
Simple_repeat |
| scaffold1546 |
28209 |
28283 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold1546 |
32069 |
32107 |
+ |
(ACC)n |
Simple_repeat |
| scaffold1546 |
32485 |
32542 |
+ |
A-rich |
Low_complexity |
| scaffold1546 |
34436 |
34474 |
+ |
(TACAGAG)n |
Simple_repeat |
| scaffold1546 |
34498 |
34767 |
- |
RS17600 |
Unspecified |
| scaffold1546 |
35980 |
36025 |
+ |
(TTAACAT)n |
Simple_repeat |
| scaffold1546 |
36407 |
36504 |
+ |
RS15162 |
Unspecified |
| scaffold1546 |
36418 |
36526 |
+ |
RS16382 |
Unspecified |
| scaffold1546 |
39442 |
39474 |
+ |
(T)n |
Simple_repeat |
| scaffold1546 |
39530 |
39569 |
+ |
GA-rich |
Low_complexity |
| scaffold1546 |
39658 |
39693 |
+ |
(T)n |
Simple_repeat |
| scaffold1546 |
39702 |
39731 |
+ |
(AATTTA)n |
Simple_repeat |
| scaffold1546 |
39749 |
39788 |
+ |
GA-rich |
Low_complexity |
| scaffold1546 |
39901 |
39926 |
+ |
(CCCT)n |
Simple_repeat |
| scaffold1546 |
40570 |
40682 |
+ |
RS4475 |
Unspecified |
| scaffold1546 |
41244 |
41507 |
+ |
RS10 |
Unspecified |
| scaffold1546 |
41578 |
41644 |
+ |
RS148 |
Unspecified |
| scaffold1546 |
41981 |
42019 |
+ |
(ATTTTTC)n |
Simple_repeat |
| scaffold1546 |
42407 |
42623 |
+ |
RS4 |
Unspecified |
| scaffold1546 |
43189 |
43220 |
+ |
A-rich |
Low_complexity |
| scaffold1546 |
43254 |
43310 |
- |
RS178 |
Unspecified |
| scaffold1546 |
43503 |
43557 |
+ |
A-rich |
Low_complexity |
| scaffold1546 |
44212 |
44450 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold1546 |
44266 |
44450 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold1546 |
46264 |
46286 |
+ |
(A)n |
Simple_repeat |
| scaffold1546 |
46983 |
47018 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1546 |
47607 |
47627 |
+ |
(A)n |
Simple_repeat |
| scaffold1546 |
48204 |
48263 |
- |
RS15741 |
Unspecified |
| scaffold1546 |
48264 |
48558 |
- |
RS4679 |
Unspecified |
| scaffold1546 |
48565 |
48648 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold1546 |
48650 |
48817 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1546 |
48706 |
48923 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold1546 |
50254 |
50278 |
+ |
(T)n |
Simple_repeat |
| scaffold1546 |
50280 |
50371 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1546 |
50372 |
50433 |
+ |
(GGTGGTC)n |
Simple_repeat |
| scaffold1546 |
50449 |
50505 |
+ |
(GGT)n |
Simple_repeat |
| scaffold1546 |
50508 |
50640 |
+ |
RS9351 |
Unspecified |
| scaffold1546 |
50680 |
51118 |
+ |
RS373 |
Unspecified |
| scaffold1546 |
51271 |
51296 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold1546 |
51467 |
51518 |
+ |
(TATTTTT)n |
Simple_repeat |
| scaffold1546 |
55134 |
55199 |
- |
Gypsy-19_SB-LTR |
LTR/Gypsy |
| scaffold1546 |
57880 |
57913 |
+ |
(T)n |
Simple_repeat |
| scaffold1546 |
59238 |
59486 |
+ |
RS1 |
Unspecified |
| scaffold1546 |
59534 |
59744 |
- |
RS86 |
Unspecified |
| scaffold1546 |
59985 |
60094 |
- |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold1546 |
62945 |
62990 |
+ |
RS73 |
Unspecified |
| scaffold1546 |
65883 |
65911 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold1546 |
68769 |
68813 |
+ |
(GTG)n |
Simple_repeat |
| scaffold1546 |
70404 |
70534 |
+ |
RS2782 |
Unspecified |
| scaffold1546 |
70594 |
70617 |
+ |
(A)n |
Simple_repeat |
| scaffold1546 |
71363 |
71394 |
+ |
A-rich |
Low_complexity |
| scaffold1546 |
71768 |
71804 |
+ |
(TTC)n |
Simple_repeat |
| scaffold1546 |
71925 |
71949 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold1546 |
72034 |
72071 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold1546 |
72072 |
72144 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1546 |
72817 |
73059 |
- |
RS4 |
Unspecified |
| scaffold1546 |
73739 |
73763 |
+ |
(A)n |
Simple_repeat |
| scaffold1546 |
74714 |
74795 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold1546 |
75527 |
75680 |
- |
PL850 |
Unspecified |
| scaffold1546 |
75764 |
75796 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold1546 |
76059 |
76149 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold1546 |
76791 |
76815 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold1546 |
80784 |
80826 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1546 |
82091 |
82278 |
+ |
RS509 |
Unspecified |
| scaffold1546 |
83766 |
83789 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold1546 |
83829 |
84210 |
- |
RS1442 |
Unspecified |
| scaffold1546 |
84305 |
84326 |
+ |
(A)n |
Simple_repeat |
| scaffold1546 |
84654 |
84707 |
+ |
(AATATAT)n |
Simple_repeat |
| scaffold1546 |
84816 |
84907 |
+ |
LT1_EPa |
LTR? |
| scaffold1546 |
85724 |
85809 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold1546 |
85987 |
86052 |
+ |
(TTTATTA)n |
Simple_repeat |
| scaffold1546 |
86970 |
87015 |
+ |
(TCAAGT)n |
Simple_repeat |
| scaffold1546 |
87232 |
87296 |
+ |
A-rich |
Low_complexity |
| scaffold1546 |
93680 |
93733 |
+ |
A-rich |
Low_complexity |
| scaffold1546 |
94070 |
94383 |
- |
RS9493 |
Unspecified |
| scaffold1546 |
94434 |
94627 |
+ |
RS8001 |
Unspecified |
| scaffold1546 |
94499 |
94643 |
+ |
RS13174 |
Unspecified |
| scaffold1546 |
94988 |
95063 |
- |
RS5154 |
Unspecified |
| scaffold1546 |
95365 |
95458 |
+ |
RS16382 |
Unspecified |
| scaffold1546 |
95695 |
95893 |
- |
RS686 |
Unspecified |
| scaffold1546 |
96066 |
96106 |
+ |
A-rich |
Low_complexity |
| scaffold1546 |
96366 |
96442 |
- |
RS520 |
Unspecified |
| scaffold1546 |
96427 |
96550 |
- |
RS520 |
Unspecified |
| scaffold1546 |
96467 |
96578 |
+ |
RS13405 |
Unspecified |
| scaffold1546 |
96919 |
96949 |
+ |
(T)n |
Simple_repeat |
| scaffold1546 |
97029 |
97139 |
- |
hAT-9_SBi |
DNA/hAT-Tag1 |
| scaffold1546 |
97140 |
97228 |
- |
RS10269 |
Unspecified |
| scaffold1546 |
97832 |
98026 |
+ |
RS10076 |
Unspecified |
| scaffold1546 |
98406 |
98447 |
+ |
(ATCTA)n |
Simple_repeat |
| scaffold1546 |
98482 |
98539 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1546 |
98545 |
99006 |
- |
PL577 |
Unspecified |
| scaffold1546 |
99006 |
99400 |
+ |
PL470 |
Unspecified |
| scaffold1546 |
99524 |
99656 |
+ |
RS533 |
Unspecified |
| scaffold1546 |
100045 |
100147 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold1546 |
100807 |
101413 |
- |
RS9493 |
Unspecified |
| scaffold1546 |
101428 |
101630 |
+ |
RS8001 |
Unspecified |
| scaffold1546 |
101501 |
101646 |
+ |
RS13174 |
Unspecified |
| scaffold1546 |
101855 |
101992 |
+ |
RS5290 |
Unspecified |
| scaffold1546 |
101862 |
102010 |
+ |
RS9692 |
Unspecified |
| scaffold1546 |
101974 |
102030 |
+ |
RS9692 |
Unspecified |
| scaffold1546 |
102032 |
102234 |
- |
RS5154 |
Unspecified |
| scaffold1546 |
103837 |
103862 |
+ |
(A)n |
Simple_repeat |
| scaffold1546 |
103952 |
103987 |
+ |
A-rich |
Low_complexity |
| scaffold1546 |
104152 |
104204 |
+ |
A-rich |
Low_complexity |
| scaffold1546 |
104390 |
104549 |
+ |
RS4954 |
Unspecified |
| scaffold1546 |
104669 |
104875 |
+ |
RS8696 |
Unspecified |
| scaffold1546 |
105171 |
105305 |
- |
RS4579 |
Unspecified |
| scaffold1546 |
105192 |
105448 |
+ |
RS1517 |
Unspecified |
| scaffold1546 |
106846 |
106877 |
+ |
(T)n |
Simple_repeat |
| scaffold1546 |
107130 |
107161 |
+ |
A-rich |
Low_complexity |
| scaffold1546 |
108550 |
108575 |
+ |
(TA)n |
Simple_repeat |
| scaffold1546 |
108695 |
108726 |
+ |
A-rich |
Low_complexity |
| scaffold1546 |
110124 |
110380 |
- |
RS1517 |
Unspecified |
| scaffold1546 |
110267 |
110401 |
+ |
RS4579 |
Unspecified |
| scaffold1546 |
110697 |
110903 |
- |
RS8696 |
Unspecified |
| scaffold1546 |
111023 |
111182 |
- |
RS4954 |
Unspecified |
| scaffold1546 |
111488 |
111538 |
+ |
A-rich |
Low_complexity |
| scaffold1546 |
111585 |
111620 |
+ |
(T)n |
Simple_repeat |
| scaffold1546 |
111710 |
111744 |
+ |
(T)n |
Simple_repeat |
| scaffold1546 |
111862 |
111897 |
+ |
(TA)n |
Simple_repeat |
| scaffold1546 |
111977 |
112041 |
+ |
A-rich |
Low_complexity |
| scaffold1546 |
112250 |
112297 |
+ |
RS17947 |
Unspecified |
| scaffold1546 |
112570 |
112629 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1546 |
113051 |
113437 |
+ |
RS5154 |
Unspecified |
| scaffold1546 |
113439 |
113495 |
- |
RS9692 |
Unspecified |
| scaffold1546 |
113459 |
113607 |
- |
RS9692 |
Unspecified |
| scaffold1546 |
113477 |
113614 |
- |
RS5290 |
Unspecified |
| scaffold1546 |
113823 |
113968 |
- |
RS13174 |
Unspecified |