scaffold15560 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold15560 |
1 |
119 |
+ |
PL362 |
Unspecified |
| scaffold15560 |
287 |
764 |
+ |
RS265 |
Unspecified |
| scaffold15560 |
873 |
913 |
- |
CINFUL3_I-int |
LTR/Gypsy |
| scaffold15560 |
1186 |
2064 |
+ |
RS1282 |
Unspecified |
| scaffold15560 |
1319 |
2657 |
+ |
RS684 |
Unspecified |
| scaffold15560 |
2556 |
2824 |
+ |
RS969 |
Unspecified |
| scaffold15560 |
3177 |
3837 |
+ |
RS969 |
Unspecified |
| scaffold15560 |
3799 |
4657 |
+ |
RS1236 |
Unspecified |
| scaffold15560 |
6641 |
6681 |
+ |
A-rich |
Low_complexity |
| scaffold15560 |
13988 |
14027 |
+ |
G-rich |
Low_complexity |
| scaffold15560 |
14181 |
14253 |
+ |
(TCCCC)n |
Simple_repeat |
| scaffold15560 |
16965 |
16986 |
+ |
(A)n |
Simple_repeat |
| scaffold15560 |
17378 |
17402 |
+ |
(T)n |
Simple_repeat |
| scaffold15560 |
18038 |
18084 |
+ |
(A)n |
Simple_repeat |
| scaffold15560 |
18871 |
19164 |
+ |
RS1746 |
Unspecified |
| scaffold15560 |
18943 |
19233 |
- |
RS1746 |
Unspecified |
| scaffold15560 |
19430 |
19489 |
+ |
(TTAATTT)n |
Simple_repeat |
| scaffold15560 |
20149 |
20201 |
+ |
(TTTATA)n |
Simple_repeat |
| scaffold15560 |
21173 |
21193 |
+ |
(T)n |
Simple_repeat |
| scaffold15560 |
21466 |
21888 |
+ |
PL226 |
Unspecified |
| scaffold15560 |
22013 |
22057 |
- |
Gypsy-36_Mad-I |
LTR/Gypsy |
| scaffold15560 |
22059 |
22476 |
+ |
PL226 |
Unspecified |
| scaffold15560 |
23098 |
23131 |
+ |
(A)n |
Simple_repeat |
| scaffold15560 |
23937 |
23965 |
+ |
(A)n |
Simple_repeat |
| scaffold15560 |
25535 |
25610 |
+ |
(TAA)n |
Simple_repeat |
| scaffold15560 |
25813 |
25847 |
+ |
A-rich |
Low_complexity |
| scaffold15560 |
26265 |
26354 |
- |
Gypsy-34_SB-I |
LTR/Gypsy |
| scaffold15560 |
32988 |
33455 |
+ |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold15560 |
33522 |
33643 |
+ |
Gypsy27-ZM_I-int |
LTR/Gypsy |
| scaffold15560 |
33615 |
33652 |
+ |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold15560 |
34086 |
35185 |
+ |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold15560 |
35388 |
35422 |
+ |
A-rich |
Low_complexity |
| scaffold15560 |
35563 |
35622 |
+ |
(CATAA)n |
Simple_repeat |
| scaffold15560 |
36519 |
37120 |
+ |
RS182 |
Unspecified |
| scaffold15560 |
38053 |
38086 |
+ |
A-rich |
Low_complexity |
| scaffold15560 |
38838 |
38994 |
+ |
TOTO1_LP_I-int |
LTR/Copia |
| scaffold15560 |
39090 |
39661 |
+ |
RS61 |
Unspecified |
| scaffold15560 |
39661 |
39951 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold15560 |
40044 |
40096 |
+ |
(T)n |
Simple_repeat |
| scaffold15560 |
40202 |
40284 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold15560 |
40223 |
40306 |
- |
Copia-10_TC-I |
LTR/Copia |
| scaffold15560 |
40793 |
40835 |
+ |
A-rich |
Low_complexity |
| scaffold15560 |
41168 |
41205 |
+ |
(TCA)n |
Simple_repeat |
| scaffold15560 |
41206 |
41212 |
+ |
(TCATACA)n |
Simple_repeat |
| scaffold15560 |
43333 |
43404 |
+ |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold15560 |
44209 |
44543 |
+ |
RS3795 |
Unspecified |
| scaffold15560 |
44959 |
45060 |
+ |
A-rich |
Low_complexity |
| scaffold15560 |
46149 |
46912 |
- |
PL475 |
Unspecified |
| scaffold15560 |
47086 |
47111 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold15560 |
47733 |
47903 |
+ |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold15560 |
49012 |
49696 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold15560 |
49863 |
49910 |
+ |
(TGA)n |
Simple_repeat |
| scaffold15560 |
51592 |
52399 |
- |
RS1338 |
Unspecified |
| scaffold15560 |
52183 |
52903 |
+ |
RS49 |
Unspecified |
| scaffold15560 |
52900 |
52963 |
+ |
OPHELIA3_HV |
LTR/Gypsy |
| scaffold15560 |
53787 |
54571 |
+ |
PL746 |
Unspecified |
| scaffold15560 |
53789 |
54714 |
+ |
PL877 |
Unspecified |
| scaffold15560 |
55501 |
56496 |
- |
RS2700 |
Unspecified |