scaffold17012 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold17012 |
236 |
294 |
- |
RS16392 |
Unspecified |
| scaffold17012 |
245 |
626 |
- |
RS29 |
Unspecified |
| scaffold17012 |
808 |
923 |
+ |
RS212 |
Unspecified |
| scaffold17012 |
919 |
975 |
+ |
(TATATAG)n |
Simple_repeat |
| scaffold17012 |
2280 |
2505 |
+ |
RS10137 |
Unspecified |
| scaffold17012 |
2671 |
2744 |
+ |
RS10137 |
Unspecified |
| scaffold17012 |
5253 |
5358 |
- |
PL436 |
Unspecified |
| scaffold17012 |
5272 |
5358 |
+ |
RS4475 |
Unspecified |
| scaffold17012 |
5284 |
5358 |
+ |
RS13929 |
Unspecified |
| scaffold17012 |
5465 |
5819 |
+ |
PL564 |
Unspecified |
| scaffold17012 |
7221 |
7319 |
- |
RS511 |
Unspecified |
| scaffold17012 |
7317 |
8090 |
- |
RS786 |
Unspecified |
| scaffold17012 |
8159 |
8209 |
- |
RS9268 |
Unspecified |
| scaffold17012 |
8253 |
8302 |
- |
RS9268 |
Unspecified |
| scaffold17012 |
8358 |
8407 |
- |
RS9268 |
Unspecified |
| scaffold17012 |
8463 |
8619 |
- |
RS9268 |
Unspecified |
| scaffold17012 |
10104 |
10150 |
+ |
(GAT)n |
Simple_repeat |
| scaffold17012 |
10365 |
10455 |
- |
RS11204 |
Unspecified |
| scaffold17012 |
10468 |
10512 |
+ |
Gypsy-5_SMo-I |
LTR/Gypsy |
| scaffold17012 |
11068 |
11135 |
- |
RS11373 |
Unspecified |
| scaffold17012 |
11138 |
11251 |
- |
RS11373 |
Unspecified |
| scaffold17012 |
13161 |
13198 |
- |
RS6036 |
Unspecified |
| scaffold17012 |
13197 |
13250 |
- |
RS6036 |
Unspecified |
| scaffold17012 |
13578 |
13695 |
- |
RS10657 |
Unspecified |
| scaffold17012 |
13959 |
14069 |
- |
RS7899 |
Unspecified |
| scaffold17012 |
14519 |
14707 |
+ |
RS1 |
Unspecified |
| scaffold17012 |
15047 |
15310 |
- |
RS356 |
Unspecified |
| scaffold17012 |
16034 |
16255 |
- |
RS18405 |
Unspecified |
| scaffold17012 |
16063 |
16279 |
+ |
RS16888 |
Unspecified |
| scaffold17012 |
16412 |
16641 |
+ |
RS18 |
Unspecified |
| scaffold17012 |
16990 |
17008 |
+ |
(ATA)n |
Simple_repeat |
| scaffold17012 |
18254 |
18347 |
+ |
RS4475 |
Unspecified |
| scaffold17012 |
18714 |
18818 |
- |
PL288 |
Unspecified |
| scaffold17012 |
19224 |
19278 |
+ |
(AT)n |
Simple_repeat |
| scaffold17012 |
20265 |
20284 |
+ |
(ACA)n |
Simple_repeat |
| scaffold17012 |
21105 |
21266 |
+ |
RS459 |
Unspecified |
| scaffold17012 |
23012 |
23046 |
+ |
(CACT)n |
Simple_repeat |
| scaffold17012 |
24666 |
24726 |
- |
RS310 |
Unspecified |
| scaffold17012 |
28192 |
28224 |
+ |
(TGATAT)n |
Simple_repeat |
| scaffold17012 |
29014 |
29059 |
+ |
A-rich |
Low_complexity |
| scaffold17012 |
29098 |
29271 |
+ |
EnSpm-1_HV |
DNA/CMC-EnSpm |
| scaffold17012 |
29344 |
29392 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold17012 |
29393 |
29421 |
+ |
(T)n |
Simple_repeat |
| scaffold17012 |
29422 |
29440 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold17012 |
33184 |
33248 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold17012 |
38827 |
38882 |
+ |
GA-rich |
Low_complexity |
| scaffold17012 |
38958 |
39033 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold17012 |
41033 |
41278 |
- |
RS512 |
Unspecified |
| scaffold17012 |
41556 |
41575 |
+ |
(GGC)n |
Simple_repeat |
| scaffold17012 |
41962 |
41997 |
+ |
(CTCGTGT)n |
Simple_repeat |
| scaffold17012 |
48365 |
48398 |
+ |
(T)n |
Simple_repeat |
| scaffold17012 |
51111 |
51166 |
- |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold17012 |
63798 |
63831 |
+ |
(AAGCTG)n |
Simple_repeat |
| scaffold17012 |
64828 |
64856 |
+ |
(CA)n |
Simple_repeat |
| scaffold17012 |
65168 |
65210 |
+ |
(TCT)n |
Simple_repeat |
| scaffold17012 |
65259 |
65282 |
+ |
(T)n |
Simple_repeat |
| scaffold17012 |
65374 |
65409 |
+ |
(T)n |
Simple_repeat |
| scaffold17012 |
65464 |
65495 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold17012 |
65737 |
65758 |
+ |
(AATT)n |
Simple_repeat |
| scaffold17012 |
66087 |
66129 |
+ |
(TCCTTAC)n |
Simple_repeat |
| scaffold17012 |
68883 |
68913 |
+ |
A-rich |
Low_complexity |
| scaffold17012 |
69455 |
69478 |
+ |
(A)n |
Simple_repeat |
| scaffold17012 |
70306 |
70348 |
+ |
(ACAA)n |
Simple_repeat |
| scaffold17012 |
70466 |
70521 |
+ |
A-rich |
Low_complexity |
| scaffold17012 |
70674 |
70753 |
+ |
(CGGCGA)n |
Simple_repeat |
| scaffold17012 |
70867 |
70896 |
+ |
(AAT)n |
Simple_repeat |
| scaffold17012 |
70922 |
70977 |
+ |
GA-rich |
Low_complexity |
| scaffold17012 |
71091 |
71136 |
+ |
(TCT)n |
Simple_repeat |
| scaffold17012 |
71199 |
71297 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold17012 |
71543 |
71617 |
+ |
RS522 |
Unspecified |
| scaffold17012 |
71683 |
71772 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold17012 |
71806 |
71965 |
+ |
RS6556 |
Unspecified |
| scaffold17012 |
72096 |
72118 |
+ |
(A)n |
Simple_repeat |
| scaffold17012 |
74979 |
75025 |
+ |
(CAT)n |
Simple_repeat |
| scaffold17012 |
75085 |
75130 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold17012 |
75137 |
75192 |
+ |
(ACTCCTC)n |
Simple_repeat |
| scaffold17012 |
75193 |
75216 |
+ |
(CT)n |
Simple_repeat |
| scaffold17012 |
75367 |
75422 |
+ |
(ACTCCTC)n |
Simple_repeat |
| scaffold17012 |
75423 |
75446 |
+ |
(CT)n |
Simple_repeat |
| scaffold17012 |
75652 |
75708 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold17012 |
75709 |
75720 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold17012 |
75733 |
75804 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold17012 |
76994 |
77017 |
+ |
(TCAA)n |
Simple_repeat |
| scaffold17012 |
77738 |
77767 |
+ |
(TCA)n |
Simple_repeat |
| scaffold17012 |
79650 |
79681 |
+ |
(CCAATT)n |
Simple_repeat |
| scaffold17012 |
80596 |
80617 |
+ |
(A)n |
Simple_repeat |
| scaffold17012 |
81064 |
81093 |
+ |
(TG)n |
Simple_repeat |
| scaffold17012 |
81149 |
81359 |
+ |
RS22 |
Unspecified |
| scaffold17012 |
81785 |
81879 |
+ |
(TTCA)n |
Simple_repeat |
| scaffold17012 |
82240 |
82257 |
+ |
(A)n |
Simple_repeat |
| scaffold17012 |
82271 |
82297 |
+ |
(A)n |
Simple_repeat |
| scaffold17012 |
82976 |
83349 |
- |
RS8 |
Unspecified |
| scaffold17012 |
83591 |
83643 |
+ |
(ATTTTTA)n |
Simple_repeat |
| scaffold17012 |
83591 |
83741 |
+ |
(ATTTTTA)n |
Simple_repeat |
| scaffold17012 |
83636 |
83771 |
+ |
(AT)n |
Simple_repeat |
| scaffold17012 |
83724 |
83771 |
+ |
(AT)n |
Simple_repeat |
| scaffold17012 |
83798 |
84236 |
- |
RS3094 |
Unspecified |
| scaffold17012 |
84209 |
84422 |
- |
RS3094 |
Unspecified |
| scaffold17012 |
84251 |
84442 |
- |
RS3094 |
Unspecified |
| scaffold17012 |
84353 |
84537 |
- |
RS3094 |
Unspecified |
| scaffold17012 |
84551 |
84751 |
- |
RS3094 |
Unspecified |
| scaffold17012 |
84641 |
84839 |
- |
RS3094 |
Unspecified |
| scaffold17012 |
84730 |
84918 |
- |
RS3094 |
Unspecified |
| scaffold17012 |
85208 |
85260 |
- |
RS743 |
Unspecified |
| scaffold17012 |
85215 |
85317 |
+ |
RS4475 |
Unspecified |
| scaffold17012 |
85754 |
85786 |
- |
TRC1 |
DNA/PIF-Harbinger |
| scaffold17012 |
86409 |
86487 |
+ |
(AATTAAT)n |
Simple_repeat |
| scaffold17012 |
86734 |
86826 |
- |
RS18078 |
Unspecified |
| scaffold17012 |
87481 |
87638 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold17012 |
88725 |
88809 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold17012 |
88860 |
88903 |
- |
RS18111 |
Unspecified |
| scaffold17012 |
90107 |
90145 |
+ |
(TGGATT)n |
Simple_repeat |
| scaffold17012 |
90952 |
90977 |
+ |
(GAA)n |
Simple_repeat |
| scaffold17012 |
92434 |
92502 |
+ |
RS750 |
Unspecified |
| scaffold17012 |
92872 |
92929 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold17012 |
93036 |
93061 |
+ |
(CTAC)n |
Simple_repeat |
| scaffold17012 |
93430 |
93484 |
+ |
(TA)n |
Simple_repeat |
| scaffold17012 |
97150 |
97250 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold17012 |
97342 |
97417 |
+ |
GA-rich |
Low_complexity |
| scaffold17012 |
97602 |
97640 |
+ |
(TTGTTG)n |
Simple_repeat |
| scaffold17012 |
97874 |
97946 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold17012 |
97971 |
98049 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold17012 |
98148 |
98196 |
+ |
(AATCATT)n |
Simple_repeat |
| scaffold17012 |
98336 |
98369 |
+ |
(T)n |
Simple_repeat |
| scaffold17012 |
98487 |
98605 |
- |
RS144 |
Unspecified |
| scaffold17012 |
99084 |
99683 |
+ |
PL308 |
Unspecified |
| scaffold17012 |
99708 |
99798 |
- |
RS15697 |
Unspecified |
| scaffold17012 |
100218 |
100342 |
- |
RS452 |
Unspecified |
| scaffold17012 |
100369 |
100438 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold17012 |
101041 |
101134 |
+ |
RS16382 |
Unspecified |
| scaffold17012 |
102320 |
102441 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold17012 |
102442 |
102480 |
+ |
(GAAAATA)n |
Simple_repeat |
| scaffold17012 |
102975 |
103055 |
+ |
(CAGCT)n |
Simple_repeat |