scaffold1709 Repeat List
genome start end strand repeat-name repeat-class
scaffold1709 2 49 + G-rich Low_complexity
scaffold1709 179 204 + (A)n Simple_repeat
scaffold1709 412 441 + (T)n Simple_repeat
scaffold1709 734 1521 - PL818 Unspecified
scaffold1709 2154 2242 + RS750 Unspecified
scaffold1709 2766 2863 + RS3380 Unspecified
scaffold1709 6302 6332 + A-rich Low_complexity
scaffold1709 6484 6513 + (A)n Simple_repeat
scaffold1709 6732 6892 - RS13408 Unspecified
scaffold1709 6993 7151 + RS10599 Unspecified
scaffold1709 7527 7620 + RS1305 Unspecified
scaffold1709 9285 9390 + RS1550 Unspecified
scaffold1709 9888 9939 + (GGT)n Simple_repeat
scaffold1709 10054 10715 - RS623 Unspecified
scaffold1709 10392 10821 + RS3439 Unspecified
scaffold1709 10844 10867 + (TGA)n Simple_repeat
scaffold1709 11268 11422 - RS3202 Unspecified
scaffold1709 12332 12398 + A-rich Low_complexity
scaffold1709 12570 12592 + (T)n Simple_repeat
scaffold1709 13202 13225 + (A)n Simple_repeat
scaffold1709 13907 14071 - RS13408 Unspecified
scaffold1709 14158 14316 + RS10599 Unspecified
scaffold1709 14564 14656 + RS1305 Unspecified
scaffold1709 15197 15395 + PL128 Unspecified
scaffold1709 15297 15409 + PL123 Unspecified
scaffold1709 15412 15743 + PL766 Unspecified
scaffold1709 16312 16357 + (TGTATA)n Simple_repeat
scaffold1709 17249 17302 + (TTTTT)n Simple_repeat
scaffold1709 18067 18126 + (ATTAAGA)n Simple_repeat
scaffold1709 18603 19742 + L1-16_Mad LINE/L1
scaffold1709 19846 20129 - LTR2-ZM_LTR LTR
scaffold1709 20187 20291 + RS13730 Unspecified
scaffold1709 21536 21553 + (A)n Simple_repeat
scaffold1709 21687 21715 + (AATAAA)n Simple_repeat
scaffold1709 22478 22508 + (A)n Simple_repeat
scaffold1709 22853 23153 + RS1621 Unspecified
scaffold1709 23208 23377 - RS13408 Unspecified
scaffold1709 23468 23626 + RS10599 Unspecified
scaffold1709 24092 24155 + (ATATT)n Simple_repeat
scaffold1709 24294 24319 + (T)n Simple_repeat
scaffold1709 24781 24910 - RS844 Unspecified
scaffold1709 24900 25005 - RS13324 Unspecified
scaffold1709 25219 25279 + Copia-2_SL-LTR LTR/Copia
scaffold1709 25881 25918 + A-rich Low_complexity
scaffold1709 26913 27157 + RS782 Unspecified
scaffold1709 27407 27502 - RS18405 Unspecified
scaffold1709 28427 28521 + RS4475 Unspecified
scaffold1709 30882 30946 + A-rich Low_complexity
scaffold1709 31194 31359 - RS13408 Unspecified
scaffold1709 31453 31611 + RS10599 Unspecified
scaffold1709 31629 31649 + (ATT)n Simple_repeat
scaffold1709 31923 32000 + (AATT)n Simple_repeat
scaffold1709 32986 33183 + (GATAAT)n Simple_repeat
scaffold1709 33188 33768 + HAT-14_Mad DNA/hAT-Tip100
scaffold1709 33791 33836 - hAT-5_STu DNA/hAT-Tip100
scaffold1709 33845 33887 + A-rich Low_complexity
scaffold1709 33989 35601 + HAT-14_Mad DNA/hAT-Tip100
scaffold1709 35969 36553 + PL216 Unspecified
scaffold1709 36508 36567 - RS11150 Unspecified
scaffold1709 39054 39280 - RS326 Unspecified
scaffold1709 39734 39875 + (CCCGA)n Simple_repeat
scaffold1709 39876 39948 + (CGACC)n Simple_repeat
scaffold1709 39949 39975 + (CCCGA)n Simple_repeat
scaffold1709 40144 40369 + (CCCGA)n Simple_repeat
scaffold1709 41344 41498 - RS13408 Unspecified
scaffold1709 41500 41534 + (GTAATC)n Simple_repeat
scaffold1709 41599 41756 + RS10599 Unspecified
scaffold1709 42849 43046 - RS522 Unspecified
scaffold1709 43777 43831 + (AATATA)n Simple_repeat
scaffold1709 45024 45059 + (TCGTT)n Simple_repeat
scaffold1709 46459 46539 + RS18111 Unspecified
scaffold1709 48244 48416 - RS133 Unspecified
scaffold1709 49599 49617 + (A)n Simple_repeat
scaffold1709 49705 49751 + RS25 Unspecified
scaffold1709 49705 49761 + PL582 Unspecified
scaffold1709 50119 50171 - PL133 Unspecified
scaffold1709 50442 51212 + TY1_Copia TY1_Copia(TransposonPSI)
scaffold1709 51474 52331 + Copia-32-I_VV LTR/Copia
scaffold1709 52352 53273 - ATCopia26I LTR/Copia
scaffold1709 53356 53600 + PL764 Unspecified
scaffold1709 53602 54012 - PL3 Unspecified
scaffold1709 54017 54155 - PL133 Unspecified
scaffold1709 54531 54570 + (ACATTTC)n Simple_repeat
scaffold1709 54656 54713 - PL133 Unspecified
scaffold1709 54942 54980 + (ATTAT)n Simple_repeat
scaffold1709 55193 55292 + RS1 Unspecified
scaffold1709 55756 55877 + (GACCC)n Simple_repeat
scaffold1709 55888 56010 + RS1 Unspecified
scaffold1709 56822 56942 - PL517 Unspecified
scaffold1709 56847 56968 - PL517 Unspecified
scaffold1709 57383 57453 + RS11432 Unspecified
scaffold1709 57599 57622 + (AAT)n Simple_repeat
scaffold1709 59274 59324 + (CTGAA)n Simple_repeat
scaffold1709 59705 59866 - RS4994 Unspecified
scaffold1709 60203 60237 + (AGAAT)n Simple_repeat
scaffold1709 60741 60920 + RS38 Unspecified
scaffold1709 65263 65279 + (A)n Simple_repeat
scaffold1709 66074 66091 + (A)n Simple_repeat
scaffold1709 66265 66281 + (T)n Simple_repeat
scaffold1709 66501 66763 + RS1042 Unspecified
scaffold1709 67015 67104 - RS12449 Unspecified
scaffold1709 67810 67857 + (ATT)n Simple_repeat
scaffold1709 68044 68202 + Copia-3_PTri-I LTR/Copia
scaffold1709 69182 69273 - RS4475 Unspecified
scaffold1709 70582 70594 + A-rich Low_complexity
scaffold1709 70595 70642 + (AC)n Simple_repeat
scaffold1709 70898 71319 + PL494 Unspecified
scaffold1709 71331 71770 - PL919 Unspecified
scaffold1709 73322 74293 - RS14 Unspecified
scaffold1709 74281 74378 + RS2819 Unspecified
scaffold1709 74679 74705 + (TAAAA)n Simple_repeat
scaffold1709 74768 75000 + (TTCAG)n Simple_repeat
scaffold1709 76004 76172 - PL624 Unspecified
scaffold1709 77470 77516 + GA-rich Low_complexity
scaffold1709 79326 79472 - RS407 Unspecified
scaffold1709 79719 79760 + (TTTCTA)n Simple_repeat
scaffold1709 79974 80013 + (A)n Simple_repeat
scaffold1709 80098 80139 + GA-rich Low_complexity
scaffold1709 82388 82419 + A-rich Low_complexity
scaffold1709 85218 85270 + (AATC)n Simple_repeat
scaffold1709 85404 85432 + (A)n Simple_repeat
scaffold1709 85652 85679 + (A)n Simple_repeat
scaffold1709 91265 91323 + (AAGTGA)n Simple_repeat
scaffold1709 92458 92488 + (CCGCGG)n Simple_repeat
scaffold1709 92817 92894 + (TGG)n Simple_repeat
scaffold1709 92918 92948 + (GTG)n Simple_repeat
scaffold1709 93034 93057 + (GT)n Simple_repeat
scaffold1709 93200 93221 + (A)n Simple_repeat
scaffold1709 93337 93379 + A-rich Low_complexity
scaffold1709 95586 95612 + (T)n Simple_repeat
scaffold1709 95708 95939 - RS17520 Unspecified
scaffold1709 95992 96099 - RS16079 Unspecified
scaffold1709 97165 97280 - RS18194 Unspecified
scaffold1709 97415 97552 - RS16530 Unspecified
scaffold1709 97728 98002 - RS1 Unspecified
scaffold1709 99198 99318 + (CCCGA)n Simple_repeat
scaffold1709 99348 99376 + (T)n Simple_repeat
scaffold1709 100296 100880 + RS373 Unspecified
scaffold1709 101048 102209 - Copia-4_GM-I LTR/Copia
scaffold1709 103279 103311 + (ACAATG)n Simple_repeat
scaffold1709 103739 104007 + RS373 Unspecified
scaffold1709 104991 105015 + (ATTG)n Simple_repeat
scaffold1709 105052 105125 - Copia-80_PT-I LTR/Copia
scaffold1709 105401 105486 + RS2100 Unspecified
scaffold1709 105420 105666 + RS2015 Unspecified
scaffold1709 105906 105930 + (ATTG)n Simple_repeat
scaffold1709 108648 108705 + RS12655 Unspecified
scaffold1709 108715 108946 - RS17520 Unspecified
scaffold1709 108999 109106 - RS16079 Unspecified
scaffold1709 110172 110287 - RS18194 Unspecified
scaffold1709 110330 110371 - RS8517 Unspecified
scaffold1709 110422 110559 - RS16530 Unspecified
scaffold1709 110832 110922 + LTR-7_Mad-LTR LTR
scaffold1709 111321 111369 + GA-rich Low_complexity
scaffold1709 111741 112005 - RS98 Unspecified
scaffold1709 112004 112141 - RS537 Unspecified
scaffold1709 112141 112818 - PL544 Unspecified
scaffold1709 112828 113267 - PL697 Unspecified
scaffold1709 113308 113535 - RS1 Unspecified
scaffold1709 113881 113984 + RS1 Unspecified
scaffold1709 114129 114370 - RS4896 Unspecified
scaffold1709 114370 114641 - PL331 Unspecified
scaffold1709 114639 114731 - RS537 Unspecified
scaffold1709 114790 114869 + (CCCGA)n Simple_repeat
scaffold1709 121915 121954 + ATCopia24I LTR/Copia
scaffold1709 123602 124369 - Helitron-2_PTr RC/Helitron
scaffold1709 125226 125314 + RS16382 Unspecified
scaffold1709 131615 131745 + (CCCGA)n Simple_repeat
scaffold1709 132647 132665 + (A)n Simple_repeat
scaffold1709 132885 133108 - RS15176 Unspecified
scaffold1709 134080 134211 - RS17607 Unspecified
scaffold1709 134559 134610 + ATCopia24I LTR/Copia
scaffold1709 134564 134619 - CACTA_LP DNA/En-Spm
scaffold1709 136095 136630 - Helitron-2_PTr RC/Helitron
scaffold1709 138689 138896 + RS837 Unspecified
scaffold1709 139063 139220 + RS5766 Unspecified
scaffold1709 139502 139546 - Copia-15_Mad-I LTR/Copia
scaffold1709 139545 139743 + RS837 Unspecified
scaffold1709 140447 140534 - RS4256 Unspecified
scaffold1709 141328 141498 - RS5001 Unspecified
scaffold1709 141507 141541 + (CAAAA)n Simple_repeat
scaffold1709 141670 141980 - RS10562 Unspecified
scaffold1709 143893 144304 + RS919 Unspecified
scaffold1709 145027 145250 - RS15176 Unspecified
scaffold1709 146659 146706 + ATCopia24I LTR/Copia
scaffold1709 150439 150491 - RS15176 Unspecified
scaffold1709 151111 151189 - RS12598 Unspecified
scaffold1709 151525 152673 - Copia-1_PTri-I LTR/Copia
scaffold1709 153020 153072 - RS15176 Unspecified
scaffold1709 153738 153805 - RS15176 Unspecified
scaffold1709 155209 155257 + (CAT)n Simple_repeat
scaffold1709 158480 159102 + PL231 Unspecified
scaffold1709 159361 159802 + RS283 Unspecified
scaffold1709 159803 159848 + (TTTTA)n Simple_repeat
scaffold1709 159938 159966 + (T)n Simple_repeat
scaffold1709 160423 160449 + (A)n Simple_repeat
scaffold1709 161029 161048 + (T)n Simple_repeat
scaffold1709 161679 161700 + (AAAT)n Simple_repeat
scaffold1709 162207 162300 - RS4558 Unspecified
scaffold1709 162433 162464 + (CAAAA)n Simple_repeat
scaffold1709 163826 163851 + (A)n Simple_repeat
scaffold1709 164521 164573 + (ACTCCGA)n Simple_repeat
scaffold1709 164890 165060 - RS4459 Unspecified
scaffold1709 165066 165369 + RS5211 Unspecified
scaffold1709 165905 165941 + (AATTAT)n Simple_repeat
scaffold1709 166168 166231 + (GTG)n Simple_repeat
scaffold1709 166240 166266 + (T)n Simple_repeat
scaffold1709 166365 166429 + (TTTAAGA)n Simple_repeat
scaffold1709 166466 166664 + RS145 Unspecified
scaffold1709 166648 166777 - PL358 Unspecified
scaffold1709 166670 167250 - PL268 Unspecified
scaffold1709 167242 167378 + RS145 Unspecified
scaffold1709 167614 167648 + A-rich Low_complexity
scaffold1709 168135 168330 + RS12339 Unspecified
scaffold1709 168449 168913 - PL352 Unspecified
scaffold1709 168949 169005 + (TTTTTAA)n Simple_repeat
scaffold1709 173428 173478 - Copia-3_PTri-I LTR/Copia
scaffold1709 174383 174425 + (TTTT)n Simple_repeat
scaffold1709 174895 174989 - RS4558 Unspecified
scaffold1709 175132 175162 + (AAAAC)n Simple_repeat
scaffold1709 177304 177354 + (CAT)n Simple_repeat
scaffold1709 181214 181245 + (AAAT)n Simple_repeat
scaffold1709 181645 181710 + (ACCCGC)n Simple_repeat
scaffold1709 182139 182204 + A-rich Low_complexity
scaffold1709 182856 182900 + (TCATTTT)n Simple_repeat
scaffold1709 183047 183087 + (GGTTGGC)n Simple_repeat
scaffold1709 183242 183352 - RS1043 Unspecified
scaffold1709 183569 184335 - RS1235 Unspecified
scaffold1709 184198 184494 + RS1142 Unspecified
scaffold1709 184465 184672 + RS13373 Unspecified
scaffold1709 184553 184751 + RS13373 Unspecified
scaffold1709 184956 185086 - RS5735 Unspecified
scaffold1709 185020 185148 - RS5735 Unspecified
scaffold1709 185090 185162 - RS5735 Unspecified
scaffold1709 185389 185528 + RS501 Unspecified
scaffold1709 185936 186007 + (ACATT)n Simple_repeat
scaffold1709 186241 186971 - Mariner_MT DNA/TcMar-Stowaway
scaffold1709 187336 187609 + RS3629 Unspecified
scaffold1709 187954 187993 - RS10938 Unspecified
scaffold1709 187985 188033 - RS17699 Unspecified
scaffold1709 187994 188256 + RS10 Unspecified
scaffold1709 189377 189436 + ATCopia24I LTR/Copia
scaffold1709 189378 189444 + (CAT)n Simple_repeat
scaffold1709 198267 198375 - RS9734 Unspecified
scaffold1709 198394 198475 - RS8635 Unspecified
scaffold1709 198506 198540 + A-rich Low_complexity
scaffold1709 199022 199330 + PL774 Unspecified
scaffold1709 199801 200108 + (CTGAA)n Simple_repeat
scaffold1709 200459 200537 + RS17 Unspecified
scaffold1709 200459 200550 - RS18111 Unspecified
scaffold1709 201017 201249 + (TTCAG)n Simple_repeat
scaffold1709 202028 202514 - PL260 Unspecified
scaffold1709 204644 204796 - Copia-89_VV-I LTR/Copia
scaffold1709 205350 205711 - Copia-89_VV-I LTR/Copia
scaffold1709 205803 206154 - Copia-5_CP-I LTR/Copia
scaffold1709 207063 207174 - Copia-88_VV-LTR LTR/Copia
scaffold1709 210554 210576 + (T)n Simple_repeat
scaffold1709 210715 211016 + RS7123 Unspecified
scaffold1709 216851 216995 + (CCCGA)n Simple_repeat
scaffold1709 221211 221260 - Helitron-2_PTr RC/Helitron
scaffold1709 221493 221583 - Helitron-2_PTr RC/Helitron
scaffold1709 225494 225514 + (A)n Simple_repeat
scaffold1709 228837 228887 + A-rich Low_complexity
scaffold1709 229146 229326 + (T)n Simple_repeat
scaffold1709 229275 229326 + (T)n Simple_repeat
scaffold1709 229885 230085 + RS3041 Unspecified
scaffold1709 231402 231440 + (ATCAAT)n Simple_repeat
scaffold1709 232031 232071 + GA-rich Low_complexity
scaffold1709 232217 232257 + (GGT)n Simple_repeat
scaffold1709 232291 232317 + GA-rich Low_complexity
scaffold1709 232458 232594 - RS5094 Unspecified
scaffold1709 233207 233275 + (TTTTA)n Simple_repeat
scaffold1709 233423 233744 + RS3519 Unspecified
scaffold1709 233492 233880 + RS468 Unspecified
scaffold1709 234057 234098 + (ATT)n Simple_repeat
scaffold1709 235483 235518 + A-rich Low_complexity
scaffold1709 237754 237820 - RS18111 Unspecified
scaffold1709 237844 237917 - Copia-3_PTri-I LTR/Copia
scaffold1709 239388 239770 + RS29 Unspecified
scaffold1709 240018 240551 + PL753 Unspecified
scaffold1709 242421 242454 + A-rich Low_complexity
scaffold1709 243216 243246 + (A)n Simple_repeat
scaffold1709 243296 243322 + (CCAAA)n Simple_repeat
scaffold1709 246856 246907 + (AATGTG)n Simple_repeat
scaffold1709 251684 251700 + (T)n Simple_repeat
scaffold1709 252287 252522 + RS14551 Unspecified
scaffold1709 252568 252608 + A-rich Low_complexity
scaffold1709 252574 252607 + GA-rich Low_complexity
scaffold1709 253712 254265 - PL782 Unspecified
scaffold1709 255023 255045 + (A)n Simple_repeat
scaffold1709 255071 255239 + RS620 Unspecified
scaffold1709 257104 257132 + (A)n Simple_repeat
scaffold1709 257204 257590 - RS8 Unspecified
scaffold1709 257706 257891 - Copia-3_PTri-I LTR/Copia
scaffold1709 258252 258337 + (ATAATTA)n Simple_repeat
scaffold1709 258615 258838 + RS16888 Unspecified
scaffold1709 259480 259501 + (AGA)n Simple_repeat
scaffold1709 259604 259658 + (TAA)n Simple_repeat
scaffold1709 260478 260549 + (TTTAAT)n Simple_repeat
scaffold1709 260950 261010 + (ATTTAAG)n Simple_repeat
scaffold1709 261324 261359 + (ATGATTG)n Simple_repeat
scaffold1709 264621 264651 + (T)n Simple_repeat
scaffold1709 265380 265418 + (TAATTTT)n Simple_repeat
scaffold1709 266445 266474 + (CATTAT)n Simple_repeat
scaffold1709 269572 269623 + A-rich Low_complexity
scaffold1709 272425 272444 + (A)n Simple_repeat
scaffold1709 272851 273005 - PL689 Unspecified
scaffold1709 275265 276317 + TY1_Copia TY1_Copia(TransposonPSI)
scaffold1709 275265 275537 + TY1_Copia TY1_Copia(TransposonPSI)
scaffold1709 275424 275465 + SHACOP_I_MT-int LTR/Copia
scaffold1709 275486 276317 + RS95 Unspecified
scaffold1709 276320 277005 - Copia-4_GM-I LTR/Copia
scaffold1709 277074 277296 - Copia-4_GM-I LTR/Copia
scaffold1709 277814 278008 + RS4042 Unspecified
scaffold1709 277860 278028 - RS5270 Unspecified
scaffold1709 278999 279547 - Copia-4_GM-I LTR/Copia
scaffold1709 279616 279852 - Copia-4_GM-I LTR/Copia
scaffold1709 280545 280703 - RS2775 Unspecified
scaffold1709 281250 281269 + (TAA)n Simple_repeat
scaffold1709 281327 281385 - RS2837 Unspecified
scaffold1709 285375 285418 + (T)n Simple_repeat
scaffold1709 286035 286081 + (ATTATA)n Simple_repeat
scaffold1709 286535 286577 + (T)n Simple_repeat
scaffold1709 286613 286649 + (T)n Simple_repeat
scaffold1709 286939 286999 + (ATT)n Simple_repeat
scaffold1709 287157 287220 + A-rich Low_complexity
scaffold1709 287325 287588 - RS26 Unspecified
scaffold1709 287802 287844 + (ATTTTGA)n Simple_repeat
scaffold1709 288259 288542 - RS384 Unspecified
scaffold1709 291233 291323 + (ATCCAT)n Simple_repeat
scaffold1709 291345 291440 - RS6958 Unspecified
scaffold1709 291505 291554 + (A)n Simple_repeat
scaffold1709 291713 291718 + (TAAAA)n Simple_repeat
scaffold1709 291719 291747 + A-rich Low_complexity