scaffold18256 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold18256 |
921 |
1001 |
- |
Gypsy-21_ST-I |
LTR/Gypsy |
| scaffold18256 |
1458 |
1509 |
- |
Gypsy-47_BD-I |
LTR/Gypsy |
| scaffold18256 |
2813 |
3425 |
- |
RS1496 |
Unspecified |
| scaffold18256 |
3460 |
3583 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold18256 |
3584 |
4518 |
+ |
RS934 |
Unspecified |
| scaffold18256 |
5245 |
5605 |
- |
ATLINEIII |
LINE/L1 |
| scaffold18256 |
6299 |
6529 |
- |
L1-5_STu |
LINE/L1 |
| scaffold18256 |
8021 |
8202 |
+ |
PL476 |
Unspecified |
| scaffold18256 |
8508 |
8546 |
+ |
(CCAATT)n |
Simple_repeat |
| scaffold18256 |
8554 |
8575 |
+ |
(ATC)n |
Simple_repeat |
| scaffold18256 |
9452 |
9874 |
+ |
RS7228 |
Unspecified |
| scaffold18256 |
9911 |
10601 |
+ |
RS7659 |
Unspecified |
| scaffold18256 |
10668 |
10811 |
+ |
RS5821 |
Unspecified |
| scaffold18256 |
10906 |
11009 |
+ |
RS9777 |
Unspecified |
| scaffold18256 |
11045 |
11498 |
+ |
RS2721 |
Unspecified |
| scaffold18256 |
11284 |
12343 |
+ |
RS5339 |
Unspecified |
| scaffold18256 |
11630 |
11737 |
+ |
PL879 |
Unspecified |
| scaffold18256 |
12213 |
12550 |
+ |
RS7427 |
Unspecified |
| scaffold18256 |
13048 |
13203 |
+ |
RS11465 |
Unspecified |
| scaffold18256 |
13555 |
13695 |
- |
PL289 |
Unspecified |
| scaffold18256 |
14214 |
14956 |
- |
PL296 |
Unspecified |
| scaffold18256 |
14942 |
15181 |
- |
PL296 |
Unspecified |
| scaffold18256 |
15448 |
15517 |
- |
PL296 |
Unspecified |
| scaffold18256 |
15778 |
15803 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold18256 |
15969 |
16277 |
- |
RS1529 |
Unspecified |
| scaffold18256 |
16325 |
16397 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold18256 |
17398 |
17447 |
+ |
(T)n |
Simple_repeat |
| scaffold18256 |
17722 |
17753 |
+ |
(A)n |
Simple_repeat |
| scaffold18256 |
18629 |
18804 |
- |
RS12287 |
Unspecified |
| scaffold18256 |
19321 |
19353 |
+ |
(T)n |
Simple_repeat |
| scaffold18256 |
19674 |
19783 |
+ |
RS17991 |
Unspecified |
| scaffold18256 |
20710 |
20866 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold18256 |
21212 |
21241 |
+ |
(CCGAC)n |
Simple_repeat |
| scaffold18256 |
21262 |
21324 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold18256 |
21573 |
21801 |
- |
RS18 |
Unspecified |
| scaffold18256 |
22343 |
22372 |
+ |
A-rich |
Low_complexity |
| scaffold18256 |
22404 |
22746 |
+ |
RS600 |
Unspecified |
| scaffold18256 |
23314 |
23349 |
+ |
(ACTTCAA)n |
Simple_repeat |
| scaffold18256 |
24097 |
24207 |
- |
Copia-75_ST-I |
LTR/Copia |
| scaffold18256 |
24637 |
24676 |
+ |
(AGGATG)n |
Simple_repeat |
| scaffold18256 |
24675 |
25197 |
+ |
RS16801 |
Unspecified |
| scaffold18256 |
25204 |
25318 |
+ |
RS14197 |
Unspecified |
| scaffold18256 |
25254 |
25592 |
+ |
RS18184 |
Unspecified |
| scaffold18256 |
26558 |
26719 |
+ |
RS15081 |
Unspecified |
| scaffold18256 |
26870 |
26974 |
+ |
RS16045 |
Unspecified |
| scaffold18256 |
27370 |
27552 |
+ |
RS15253 |
Unspecified |
| scaffold18256 |
28121 |
28236 |
+ |
RS15783 |
Unspecified |
| scaffold18256 |
28580 |
28691 |
+ |
RS17203 |
Unspecified |
| scaffold18256 |
29730 |
29755 |
+ |
(ACAA)n |
Simple_repeat |
| scaffold18256 |
30216 |
30240 |
+ |
(T)n |
Simple_repeat |
| scaffold18256 |
30241 |
30270 |
+ |
(AATATA)n |
Simple_repeat |
| scaffold18256 |
30329 |
30434 |
- |
Gypsy-13_SMo-LTR |
LTR/Gypsy |
| scaffold18256 |
30368 |
30455 |
+ |
hAT-N16_ZM |
DNA/hAT-Ac |
| scaffold18256 |
30609 |
30765 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold18256 |
30700 |
30782 |
- |
HAT-10_Mad |
DNA/hAT-Ac |
| scaffold18256 |
31059 |
31124 |
+ |
(CCGAC)n |
Simple_repeat |
| scaffold18256 |
31208 |
31249 |
+ |
CPSC5_I-int |
LTR/Copia |
| scaffold18256 |
31584 |
31717 |
+ |
RS1328 |
Unspecified |
| scaffold18256 |
31771 |
31813 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold18256 |
32066 |
32092 |
+ |
(T)n |
Simple_repeat |
| scaffold18256 |
33280 |
33316 |
+ |
(T)n |
Simple_repeat |
| scaffold18256 |
33528 |
33561 |
+ |
(T)n |
Simple_repeat |
| scaffold18256 |
33909 |
33925 |
+ |
(T)n |
Simple_repeat |
| scaffold18256 |
34129 |
34195 |
+ |
RS549 |
Unspecified |
| scaffold18256 |
34335 |
34427 |
+ |
RS549 |
Unspecified |
| scaffold18256 |
34976 |
35025 |
+ |
(T)n |
Simple_repeat |
| scaffold18256 |
35212 |
35252 |
+ |
(A)n |
Simple_repeat |
| scaffold18256 |
35391 |
35438 |
+ |
(CTACCTT)n |
Simple_repeat |
| scaffold18256 |
36549 |
36651 |
+ |
RS549 |
Unspecified |
| scaffold18256 |
37085 |
37131 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold18256 |
37335 |
37355 |
+ |
(A)n |
Simple_repeat |
| scaffold18256 |
37655 |
38252 |
+ |
PL8 |
Unspecified |
| scaffold18256 |
38424 |
38464 |
+ |
A-rich |
Low_complexity |
| scaffold18256 |
38507 |
38542 |
+ |
A-rich |
Low_complexity |
| scaffold18256 |
39161 |
39202 |
- |
RS356 |
Unspecified |
| scaffold18256 |
39207 |
39515 |
+ |
PL189 |
Unspecified |
| scaffold18256 |
39653 |
39733 |
- |
EnSpm-17_SBi |
DNA/CMC-EnSpm |
| scaffold18256 |
41198 |
41238 |
+ |
A-rich |
Low_complexity |
| scaffold18256 |
41301 |
41387 |
- |
RS356 |
Unspecified |
| scaffold18256 |
41464 |
41513 |
+ |
(TCTTCC)n |
Simple_repeat |
| scaffold18256 |
41876 |
41928 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold18256 |
46313 |
46392 |
+ |
PL850 |
Unspecified |
| scaffold18256 |
48138 |
48167 |
+ |
(T)n |
Simple_repeat |
| scaffold18256 |
50021 |
50043 |
+ |
(GGAG)n |
Simple_repeat |
| scaffold18256 |
51677 |
51816 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold18256 |
51978 |
52148 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold18256 |
52186 |
52225 |
+ |
(TATGTG)n |
Simple_repeat |
| scaffold18256 |
52349 |
52376 |
+ |
(T)n |
Simple_repeat |
| scaffold18256 |
53466 |
53482 |
+ |
(T)n |
Simple_repeat |
| scaffold18256 |
54282 |
54470 |
- |
RS544 |
Unspecified |
| scaffold18256 |
54325 |
54497 |
+ |
RS1102 |
Unspecified |
| scaffold18256 |
57311 |
57345 |
+ |
(GCATA)n |
Simple_repeat |
| scaffold18256 |
57387 |
57461 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold18256 |
57527 |
57982 |
- |
PL352 |
Unspecified |
| scaffold18256 |
57983 |
58547 |
+ |
RS931 |
Unspecified |
| scaffold18256 |
59034 |
59089 |
+ |
Alfare1_I-int |
LTR/Copia? |
| scaffold18256 |
59103 |
59132 |
+ |
A-rich |
Low_complexity |
| scaffold18256 |
59383 |
59442 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold18256 |
59471 |
59889 |
- |
RS827 |
Unspecified |
| scaffold18256 |
59918 |
60059 |
+ |
RS1220 |
Unspecified |
| scaffold18256 |
59981 |
60074 |
+ |
RS1347 |
Unspecified |
| scaffold18256 |
60063 |
60158 |
+ |
PL488 |
Unspecified |
| scaffold18256 |
60595 |
60849 |
- |
RS51 |
Unspecified |
| scaffold18256 |
60847 |
61309 |
- |
RS827 |
Unspecified |
| scaffold18256 |
61699 |
61723 |
+ |
(AGGGG)n |
Simple_repeat |
| scaffold18256 |
61728 |
61767 |
+ |
(TGATA)n |
Simple_repeat |
| scaffold18256 |
61771 |
61842 |
+ |
(ACCTC)n |
Simple_repeat |
| scaffold18256 |
61843 |
61884 |
+ |
(TCTCTT)n |
Simple_repeat |
| scaffold18256 |
61891 |
61919 |
+ |
(TTC)n |
Simple_repeat |
| scaffold18256 |
62041 |
62091 |
+ |
(TCC)n |
Simple_repeat |
| scaffold18256 |
62105 |
62136 |
+ |
(TTA)n |
Simple_repeat |
| scaffold18256 |
62224 |
62284 |
+ |
(TGT)n |
Simple_repeat |
| scaffold18256 |
62285 |
62324 |
+ |
(ATG)n |
Simple_repeat |
| scaffold18256 |
62325 |
62345 |
+ |
(TGT)n |
Simple_repeat |
| scaffold18256 |
62365 |
62611 |
+ |
RS17449 |
Unspecified |
| scaffold18256 |
62649 |
62865 |
+ |
RS17524 |
Unspecified |
| scaffold18256 |
62897 |
63019 |
+ |
RS15555 |
Unspecified |
| scaffold18256 |
63722 |
63744 |
+ |
(TTC)n |
Simple_repeat |
| scaffold18256 |
63866 |
63916 |
+ |
(TCC)n |
Simple_repeat |
| scaffold18256 |
63930 |
63961 |
+ |
(TTA)n |
Simple_repeat |
| scaffold18256 |
64049 |
64109 |
+ |
(TGT)n |
Simple_repeat |
| scaffold18256 |
64110 |
64149 |
+ |
(ATG)n |
Simple_repeat |
| scaffold18256 |
64150 |
64170 |
+ |
(TGT)n |
Simple_repeat |
| scaffold18256 |
64190 |
64436 |
+ |
RS17449 |
Unspecified |
| scaffold18256 |
64474 |
64690 |
+ |
RS17524 |
Unspecified |
| scaffold18256 |
64729 |
64851 |
+ |
RS15555 |
Unspecified |
| scaffold18256 |
67564 |
67632 |
+ |
ATCopia24I |
LTR/Copia |
| scaffold18256 |
69814 |
69856 |
+ |
A-rich |
Low_complexity |
| scaffold18256 |
74507 |
74574 |
+ |
RS663 |
Unspecified |
| scaffold18256 |
76449 |
76555 |
+ |
GA-rich |
Low_complexity |
| scaffold18256 |
78591 |
78644 |
+ |
TEKAY_ZM-int |
LTR/Gypsy |
| scaffold18256 |
79150 |
79178 |
+ |
(T)n |
Simple_repeat |
| scaffold18256 |
79425 |
79457 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold18256 |
82757 |
82775 |
+ |
(A)n |
Simple_repeat |
| scaffold18256 |
84295 |
84608 |
+ |
PL133 |
Unspecified |
| scaffold18256 |
84693 |
84738 |
+ |
(A)n |
Simple_repeat |
| scaffold18256 |
85215 |
85238 |
+ |
(A)n |
Simple_repeat |
| scaffold18256 |
86247 |
86411 |
- |
RS3533 |
Unspecified |
| scaffold18256 |
86274 |
86407 |
- |
RS1328 |
Unspecified |
| scaffold18256 |
86821 |
86849 |
+ |
(ATA)n |
Simple_repeat |
| scaffold18256 |
87020 |
87039 |
+ |
(A)n |
Simple_repeat |
| scaffold18256 |
87622 |
87679 |
- |
RS3756 |
Unspecified |
| scaffold18256 |
87639 |
87736 |
+ |
RS53 |
Unspecified |
| scaffold18256 |
87737 |
87753 |
+ |
(A)n |
Simple_repeat |
| scaffold18256 |
87953 |
87993 |
+ |
(TAATATA)n |
Simple_repeat |
| scaffold18256 |
88150 |
88604 |
- |
PL301 |
Unspecified |
| scaffold18256 |
88604 |
88700 |
+ |
PL593 |
Unspecified |
| scaffold18256 |
88757 |
88819 |
+ |
(A)n |
Simple_repeat |
| scaffold18256 |
89895 |
89923 |
+ |
(TACGT)n |
Simple_repeat |
| scaffold18256 |
90167 |
90208 |
+ |
A-rich |
Low_complexity |
| scaffold18256 |
91467 |
91532 |
+ |
(AATAAC)n |
Simple_repeat |
| scaffold18256 |
91676 |
91826 |
+ |
RS5480 |
Unspecified |
| scaffold18256 |
91873 |
91976 |
+ |
PL473 |
Unspecified |
| scaffold18256 |
91873 |
91960 |
- |
RS33 |
Unspecified |
| scaffold18256 |
92065 |
92100 |
+ |
A-rich |
Low_complexity |
| scaffold18256 |
92953 |
93084 |
+ |
RS441 |
Unspecified |
| scaffold18256 |
92969 |
93232 |
+ |
RS10898 |
Unspecified |
| scaffold18256 |
93208 |
93422 |
+ |
RS18308 |
Unspecified |
| scaffold18256 |
93745 |
93927 |
- |
RS178 |
Unspecified |
| scaffold18256 |
93824 |
93942 |
+ |
RS17912 |
Unspecified |