scaffold1853 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1853 |
79 |
118 |
+ |
(CTAACAA)n |
Simple_repeat |
| scaffold1853 |
177 |
317 |
- |
RS2700 |
Unspecified |
| scaffold1853 |
199 |
406 |
- |
RS7985 |
Unspecified |
| scaffold1853 |
433 |
1650 |
+ |
RS730 |
Unspecified |
| scaffold1853 |
1673 |
2665 |
- |
RS838 |
Unspecified |
| scaffold1853 |
2706 |
2765 |
+ |
Gypsy-LTR_MT |
LTR/Gypsy |
| scaffold1853 |
3470 |
4374 |
- |
RS166 |
Unspecified |
| scaffold1853 |
4164 |
4930 |
+ |
RS225 |
Unspecified |
| scaffold1853 |
4820 |
4981 |
+ |
RS2800 |
Unspecified |
| scaffold1853 |
5608 |
5652 |
+ |
(ACGAGC)n |
Simple_repeat |
| scaffold1853 |
7828 |
8103 |
+ |
RS135 |
Unspecified |
| scaffold1853 |
9317 |
9506 |
+ |
MuDR-8_VV |
DNA/MULE-MuDR |
| scaffold1853 |
9883 |
9953 |
+ |
A-rich |
Low_complexity |
| scaffold1853 |
10595 |
10866 |
+ |
RS1963 |
Unspecified |
| scaffold1853 |
10666 |
11258 |
+ |
RS69 |
Unspecified |
| scaffold1853 |
11017 |
11359 |
+ |
RS976 |
Unspecified |
| scaffold1853 |
11886 |
11952 |
+ |
A-rich |
Low_complexity |
| scaffold1853 |
12864 |
12975 |
- |
L1-12_GM |
LINE/L1 |
| scaffold1853 |
13390 |
13457 |
+ |
A-rich |
Low_complexity |
| scaffold1853 |
13902 |
15344 |
+ |
RS245 |
Unspecified |
| scaffold1853 |
15209 |
15371 |
+ |
PL578 |
Unspecified |
| scaffold1853 |
15370 |
15478 |
- |
RS998 |
Unspecified |
| scaffold1853 |
15452 |
15573 |
- |
RS15184 |
Unspecified |
| scaffold1853 |
15712 |
15769 |
+ |
(ATTATA)n |
Simple_repeat |
| scaffold1853 |
16561 |
16614 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold1853 |
16918 |
16981 |
+ |
(T)n |
Simple_repeat |
| scaffold1853 |
19025 |
19672 |
+ |
RS7533 |
Unspecified |
| scaffold1853 |
21343 |
21415 |
+ |
(TTATTAA)n |
Simple_repeat |
| scaffold1853 |
21464 |
21566 |
+ |
NonLTR-2_STu |
Retroposon |
| scaffold1853 |
21589 |
22678 |
- |
RS7435 |
Unspecified |
| scaffold1853 |
23255 |
23528 |
- |
MuDR-4_Mad |
DNA/MULE-MuDR |
| scaffold1853 |
24148 |
24294 |
+ |
(AACT)n |
Simple_repeat |
| scaffold1853 |
24247 |
24294 |
+ |
(AACT)n |
Simple_repeat |
| scaffold1853 |
24815 |
24958 |
+ |
RS14708 |
Unspecified |
| scaffold1853 |
24999 |
25062 |
+ |
(GTGCTG)n |
Simple_repeat |
| scaffold1853 |
25147 |
25197 |
+ |
(T)n |
Simple_repeat |
| scaffold1853 |
25433 |
25535 |
+ |
RS9899 |
Unspecified |
| scaffold1853 |
25565 |
25663 |
+ |
RS16382 |
Unspecified |
| scaffold1853 |
25661 |
25856 |
+ |
RS12746 |
Unspecified |
| scaffold1853 |
26742 |
27718 |
- |
Copia-61_GM-I |
LTR/Copia |
| scaffold1853 |
28865 |
28907 |
+ |
GA-rich |
Low_complexity |
| scaffold1853 |
30246 |
30375 |
- |
RS48 |
Unspecified |
| scaffold1853 |
30312 |
30440 |
- |
RS48 |
Unspecified |
| scaffold1853 |
30480 |
30568 |
- |
RS4775 |
Unspecified |
| scaffold1853 |
30586 |
30674 |
- |
RS4775 |
Unspecified |
| scaffold1853 |
30708 |
30833 |
- |
RS4775 |
Unspecified |
| scaffold1853 |
30896 |
31078 |
- |
RS979 |
Unspecified |
| scaffold1853 |
30907 |
31121 |
- |
RS4066 |
Unspecified |
| scaffold1853 |
31153 |
31282 |
- |
RS2055 |
Unspecified |
| scaffold1853 |
31167 |
31329 |
- |
RS8658 |
Unspecified |
| scaffold1853 |
32594 |
33054 |
- |
Copia-61_GM-I |
LTR/Copia |
| scaffold1853 |
33810 |
33856 |
+ |
A-rich |
Low_complexity |
| scaffold1853 |
33945 |
33980 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold1853 |
34607 |
34654 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold1853 |
35181 |
35218 |
+ |
A-rich |
Low_complexity |
| scaffold1853 |
35510 |
35541 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold1853 |
40315 |
40350 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold1853 |
40692 |
41839 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold1853 |
42089 |
43363 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold1853 |
43407 |
43525 |
- |
RS14136 |
Unspecified |
| scaffold1853 |
43794 |
44082 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold1853 |
45659 |
45827 |
+ |
(ATATATA)n |
Simple_repeat |
| scaffold1853 |
45754 |
45827 |
+ |
(ATATATA)n |
Simple_repeat |
| scaffold1853 |
46987 |
47016 |
+ |
(T)n |
Simple_repeat |
| scaffold1853 |
47352 |
47383 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1853 |
48297 |
48361 |
+ |
A-rich |
Low_complexity |
| scaffold1853 |
48888 |
48989 |
- |
RS979 |
Unspecified |
| scaffold1853 |
50504 |
50532 |
+ |
RS508 |
Unspecified |
| scaffold1853 |
50516 |
51241 |
- |
RS3120 |
Unspecified |
| scaffold1853 |
53530 |
53670 |
+ |
Atlantys2_I-int |
LTR/Gypsy |
| scaffold1853 |
53816 |
55516 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold1853 |
53821 |
55473 |
+ |
Atlantys2_I-int |
LTR/Gypsy |
| scaffold1853 |
55796 |
56989 |
+ |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold1853 |
57297 |
57600 |
- |
RS2985 |
Unspecified |
| scaffold1853 |
57425 |
57671 |
+ |
RS90 |
Unspecified |
| scaffold1853 |
57540 |
58584 |
+ |
Gypsy-3_Pru-I |
LTR/Gypsy |
| scaffold1853 |
57706 |
57962 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold1853 |
58014 |
58068 |
+ |
RS90 |
Unspecified |
| scaffold1853 |
58694 |
58932 |
+ |
RS123 |
Unspecified |
| scaffold1853 |
58940 |
58972 |
+ |
(AAGCTCT)n |
Simple_repeat |