scaffold1855 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1855 |
1 |
398 |
- |
Gypsy-12_SB-I |
LTR/Gypsy |
| scaffold1855 |
536 |
653 |
- |
Gypsy-204_ZM-I |
LTR/Gypsy |
| scaffold1855 |
795 |
884 |
- |
LATIDU2_TM-int |
LTR/Gypsy |
| scaffold1855 |
5344 |
5434 |
+ |
(TCGTAT)n |
Simple_repeat |
| scaffold1855 |
6052 |
6125 |
+ |
(TATT)n |
Simple_repeat |
| scaffold1855 |
6539 |
6561 |
+ |
(TA)n |
Simple_repeat |
| scaffold1855 |
6806 |
7239 |
- |
PL494 |
Unspecified |
| scaffold1855 |
7483 |
7489 |
+ |
(TATGTG)n |
Simple_repeat |
| scaffold1855 |
7490 |
7562 |
+ |
(TTG)n |
Simple_repeat |
| scaffold1855 |
7563 |
7574 |
+ |
(TATGTG)n |
Simple_repeat |
| scaffold1855 |
7837 |
7881 |
+ |
A-rich |
Low_complexity |
| scaffold1855 |
8453 |
8508 |
+ |
RS936 |
Unspecified |
| scaffold1855 |
8515 |
8950 |
- |
RS369 |
Unspecified |
| scaffold1855 |
9101 |
9145 |
+ |
(A)n |
Simple_repeat |
| scaffold1855 |
9162 |
9215 |
+ |
(CCGGA)n |
Simple_repeat |
| scaffold1855 |
9272 |
9306 |
+ |
(CGGTC)n |
Simple_repeat |
| scaffold1855 |
10049 |
10146 |
+ |
RIRE3_I-int |
LTR/Gypsy |
| scaffold1855 |
10304 |
10368 |
+ |
Gypsy-39_Mad-I |
LTR/Gypsy |
| scaffold1855 |
10541 |
11883 |
+ |
Gypsy-39_Mad-I |
LTR/Gypsy |
| scaffold1855 |
12149 |
13497 |
+ |
Gypsy-39_Mad-I |
LTR/Gypsy |
| scaffold1855 |
13465 |
13530 |
+ |
Gypsy-39_Mad-I |
LTR/Gypsy |
| scaffold1855 |
13849 |
13888 |
+ |
(TTTTAAT)n |
Simple_repeat |
| scaffold1855 |
14378 |
14456 |
+ |
(AATAC)n |
Simple_repeat |
| scaffold1855 |
14520 |
14696 |
- |
RS6195 |
Unspecified |
| scaffold1855 |
14697 |
14834 |
+ |
RS353 |
Unspecified |
| scaffold1855 |
20348 |
20802 |
- |
RS189 |
Unspecified |
| scaffold1855 |
20720 |
20837 |
+ |
RS4068 |
Unspecified |
| scaffold1855 |
21204 |
21240 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold1855 |
21443 |
21479 |
+ |
A-rich |
Low_complexity |
| scaffold1855 |
21734 |
21778 |
+ |
(AATA)n |
Simple_repeat |
| scaffold1855 |
22062 |
22103 |
+ |
A-rich |
Low_complexity |
| scaffold1855 |
22810 |
22920 |
+ |
(AATACG)n |
Simple_repeat |
| scaffold1855 |
24100 |
24230 |
- |
RS1460 |
Unspecified |
| scaffold1855 |
24773 |
24825 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold1855 |
27188 |
27668 |
+ |
L1-15_GM |
LINE/L1 |
| scaffold1855 |
28936 |
29100 |
- |
RS9955 |
Unspecified |
| scaffold1855 |
29276 |
29316 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold1855 |
29526 |
29558 |
+ |
(AT)n |
Simple_repeat |
| scaffold1855 |
30088 |
30152 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold1855 |
30891 |
30929 |
+ |
A-rich |
Low_complexity |
| scaffold1855 |
31371 |
33128 |
+ |
RS2 |
Unspecified |
| scaffold1855 |
31664 |
33327 |
- |
RS75 |
Unspecified |
| scaffold1855 |
33743 |
33801 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold1855 |
34088 |
34147 |
+ |
A-rich |
Low_complexity |
| scaffold1855 |
34221 |
34261 |
+ |
(AATTTAT)n |
Simple_repeat |
| scaffold1855 |
34380 |
34778 |
- |
PL143 |
Unspecified |
| scaffold1855 |
34778 |
35375 |
- |
RS821 |
Unspecified |
| scaffold1855 |
36476 |
36523 |
+ |
(TA)n |
Simple_repeat |
| scaffold1855 |
36631 |
37287 |
+ |
PL344 |
Unspecified |
| scaffold1855 |
37308 |
37355 |
+ |
PL344 |
Unspecified |
| scaffold1855 |
38190 |
38275 |
+ |
(GTT)n |
Simple_repeat |
| scaffold1855 |
38289 |
38344 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1855 |
38893 |
38963 |
+ |
A-rich |
Low_complexity |
| scaffold1855 |
39011 |
39068 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold1855 |
39662 |
39695 |
+ |
(GTATTT)n |
Simple_repeat |
| scaffold1855 |
39835 |
40700 |
- |
PL532 |
Unspecified |
| scaffold1855 |
41347 |
41370 |
+ |
(TATT)n |
Simple_repeat |
| scaffold1855 |
42610 |
42890 |
+ |
PL746 |
Unspecified |
| scaffold1855 |
44903 |
45011 |
+ |
(TCGTAT)n |
Simple_repeat |
| scaffold1855 |
45518 |
45591 |
+ |
(TATT)n |
Simple_repeat |
| scaffold1855 |
45640 |
45972 |
+ |
PL350 |
Unspecified |
| scaffold1855 |
47499 |
47531 |
+ |
A-rich |
Low_complexity |
| scaffold1855 |
58017 |
58040 |
+ |
(A)n |
Simple_repeat |