scaffold1997 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1997 |
423 |
446 |
+ |
(CA)n |
Simple_repeat |
| scaffold1997 |
661 |
685 |
+ |
(ATG)n |
Simple_repeat |
| scaffold1997 |
947 |
978 |
+ |
A-rich |
Low_complexity |
| scaffold1997 |
2113 |
2237 |
+ |
RS1919 |
Unspecified |
| scaffold1997 |
4017 |
4057 |
+ |
(T)n |
Simple_repeat |
| scaffold1997 |
4266 |
4369 |
+ |
(CGGAGG)n |
Simple_repeat |
| scaffold1997 |
4588 |
4635 |
+ |
A-rich |
Low_complexity |
| scaffold1997 |
5706 |
5725 |
+ |
(T)n |
Simple_repeat |
| scaffold1997 |
6678 |
6730 |
+ |
A-rich |
Low_complexity |
| scaffold1997 |
7617 |
7665 |
+ |
(T)n |
Simple_repeat |
| scaffold1997 |
10511 |
11998 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold1997 |
10864 |
11671 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold1997 |
13014 |
13369 |
- |
PL436 |
Unspecified |
| scaffold1997 |
15009 |
15048 |
+ |
A-rich |
Low_complexity |
| scaffold1997 |
15240 |
15707 |
- |
RS58 |
Unspecified |
| scaffold1997 |
15323 |
15697 |
+ |
RS58 |
Unspecified |
| scaffold1997 |
16188 |
16194 |
+ |
(ATAATA)n |
Simple_repeat |
| scaffold1997 |
16195 |
16247 |
+ |
A-rich |
Low_complexity |
| scaffold1997 |
18014 |
19090 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold1997 |
18261 |
19054 |
- |
L1-5_STu |
LINE/L1 |
| scaffold1997 |
19118 |
19218 |
+ |
RS306 |
Unspecified |
| scaffold1997 |
19118 |
19278 |
+ |
RS172 |
Unspecified |
| scaffold1997 |
19218 |
19321 |
+ |
RS172 |
Unspecified |
| scaffold1997 |
20935 |
21161 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold1997 |
21686 |
21774 |
+ |
(ATAATTT)n |
Simple_repeat |
| scaffold1997 |
22343 |
22349 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold1997 |
22350 |
22378 |
+ |
(T)n |
Simple_repeat |
| scaffold1997 |
22379 |
22394 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold1997 |
23530 |
23663 |
- |
MUMT |
DNA/MULE-MuDR |
| scaffold1997 |
23851 |
24431 |
- |
MUMT |
DNA/MULE-MuDR |
| scaffold1997 |
25008 |
25043 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold1997 |
25767 |
25791 |
+ |
(T)n |
Simple_repeat |
| scaffold1997 |
25888 |
25916 |
+ |
A-rich |
Low_complexity |
| scaffold1997 |
26377 |
26412 |
+ |
(A)n |
Simple_repeat |
| scaffold1997 |
27666 |
27702 |
+ |
(A)n |
Simple_repeat |
| scaffold1997 |
27906 |
28234 |
- |
RS2526 |
Unspecified |
| scaffold1997 |
28656 |
28709 |
+ |
A-rich |
Low_complexity |
| scaffold1997 |
29722 |
29894 |
- |
RS6532 |
Unspecified |
| scaffold1997 |
31497 |
31540 |
+ |
(ATATTGA)n |
Simple_repeat |
| scaffold1997 |
31793 |
31847 |
+ |
A-rich |
Low_complexity |
| scaffold1997 |
32444 |
32670 |
+ |
(ATTTTAT)n |
Simple_repeat |
| scaffold1997 |
32623 |
32670 |
+ |
(ATTTTAT)n |
Simple_repeat |
| scaffold1997 |
33247 |
33646 |
+ |
RS1561 |
Unspecified |
| scaffold1997 |
33984 |
34023 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold1997 |
34116 |
34157 |
+ |
(TTTCT)n |
Simple_repeat |
| scaffold1997 |
34163 |
34204 |
+ |
(AAGATTC)n |
Simple_repeat |
| scaffold1997 |
35664 |
35757 |
+ |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold1997 |
36173 |
36210 |
+ |
(CCAA)n |
Simple_repeat |
| scaffold1997 |
36774 |
37267 |
+ |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold1997 |
38079 |
38110 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold1997 |
38397 |
38428 |
+ |
(TTTGCA)n |
Simple_repeat |
| scaffold1997 |
38951 |
38997 |
+ |
A-rich |
Low_complexity |
| scaffold1997 |
39222 |
39289 |
+ |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold1997 |
39663 |
39698 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold1997 |
39719 |
39747 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold1997 |
40648 |
41752 |
- |
RS265 |
Unspecified |
| scaffold1997 |
41746 |
43080 |
+ |
Copia-86_ST-I |
LTR/Copia |
| scaffold1997 |
43169 |
43433 |
+ |
RS736 |
Unspecified |
| scaffold1997 |
43520 |
43593 |
+ |
Copia-86_ST-I |
LTR/Copia |
| scaffold1997 |
43980 |
43997 |
+ |
(A)n |
Simple_repeat |
| scaffold1997 |
44095 |
44172 |
+ |
(CAT)n |
Simple_repeat |
| scaffold1997 |
44114 |
44179 |
- |
CACTA_LP |
DNA/CMC-EnSpm |
| scaffold1997 |
44292 |
44334 |
+ |
(CCTCAC)n |
Simple_repeat |
| scaffold1997 |
46144 |
46212 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1997 |
46213 |
46273 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1997 |
46436 |
46477 |
+ |
(A)n |
Simple_repeat |
| scaffold1997 |
46960 |
47642 |
+ |
PL262 |
Unspecified |
| scaffold1997 |
49279 |
49292 |
+ |
A-rich |
Low_complexity |
| scaffold1997 |
49293 |
49315 |
+ |
(A)n |
Simple_repeat |
| scaffold1997 |
49717 |
49757 |
+ |
(TTC)n |
Simple_repeat |
| scaffold1997 |
51484 |
51522 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold1997 |
53176 |
53332 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1997 |
53389 |
53406 |
+ |
(AT)n |
Simple_repeat |
| scaffold1997 |
53715 |
54413 |
- |
RS828 |
Unspecified |
| scaffold1997 |
54412 |
54820 |
+ |
PL436 |
Unspecified |
| scaffold1997 |
54984 |
55014 |
+ |
(AACTAA)n |
Simple_repeat |
| scaffold1997 |
55077 |
55095 |
+ |
(TC)n |
Simple_repeat |
| scaffold1997 |
55389 |
55443 |
+ |
(TTGACC)n |
Simple_repeat |
| scaffold1997 |
55577 |
55620 |
- |
Gypsy-44_Mad-I |
LTR/Gypsy |
| scaffold1997 |
56089 |
56151 |
+ |
(T)n |
Simple_repeat |
| scaffold1997 |
56214 |
56258 |
- |
Gypsy-44_Mad-I |
LTR/Gypsy |
| scaffold1997 |
56937 |
56981 |
- |
Gypsy-44_Mad-I |
LTR/Gypsy |
| scaffold1997 |
57002 |
57638 |
- |
RS785 |
Unspecified |
| scaffold1997 |
58970 |
59143 |
+ |
PL436 |
Unspecified |
| scaffold1997 |
59400 |
59418 |
+ |
(TC)n |
Simple_repeat |
| scaffold1997 |
59467 |
59715 |
- |
PL419 |
Unspecified |
| scaffold1997 |
60096 |
60131 |
+ |
(AAACT)n |
Simple_repeat |
| scaffold1997 |
60164 |
60193 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold1997 |
60195 |
60663 |
- |
RS828 |
Unspecified |
| scaffold1997 |
60662 |
61555 |
+ |
PL135 |
Unspecified |
| scaffold1997 |
61554 |
61911 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold1997 |
61834 |
61911 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold1997 |
61954 |
62023 |
+ |
(TAA)n |
Simple_repeat |
| scaffold1997 |
62068 |
62184 |
- |
Copia-66_GM-LTR |
LTR/Copia |
| scaffold1997 |
62406 |
62801 |
- |
Copia-66_GM-I |
LTR/Copia |
| scaffold1997 |
62802 |
63305 |
- |
Copia-66_GM-I |
LTR/Copia |
| scaffold1997 |
63311 |
64248 |
- |
Copia-66_GM-I |
LTR/Copia |
| scaffold1997 |
64237 |
66350 |
- |
Copia-66_GM-I |
LTR/Copia |
| scaffold1997 |
66375 |
66546 |
- |
Copia-66_GM-I |
LTR/Copia |
| scaffold1997 |
66685 |
66768 |
- |
Copia-86_VV-I |
LTR/Copia |
| scaffold1997 |
67616 |
67685 |
+ |
(TAA)n |
Simple_repeat |
| scaffold1997 |
67730 |
67846 |
- |
Copia-66_GM-LTR |
LTR/Copia |
| scaffold1997 |
67974 |
68037 |
+ |
(ATAAG)n |
Simple_repeat |
| scaffold1997 |
68159 |
68189 |
+ |
(AACTAA)n |
Simple_repeat |
| scaffold1997 |
68562 |
68616 |
+ |
(TTGACC)n |
Simple_repeat |
| scaffold1997 |
69060 |
69076 |
+ |
(T)n |
Simple_repeat |
| scaffold1997 |
69080 |
69131 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold1997 |
69126 |
69430 |
- |
RS552 |
Unspecified |
| scaffold1997 |
69435 |
69625 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold1997 |
69647 |
69790 |
- |
RS34 |
Unspecified |
| scaffold1997 |
69826 |
70021 |
+ |
RS7386 |
Unspecified |
| scaffold1997 |
70104 |
70204 |
+ |
COPMET_LTR |
LTR/Copia |
| scaffold1997 |
71593 |
71658 |
+ |
A-rich |
Low_complexity |
| scaffold1997 |
72322 |
72374 |
+ |
(ACTCATT)n |
Simple_repeat |
| scaffold1997 |
72755 |
72813 |
+ |
A-rich |
Low_complexity |
| scaffold1997 |
73465 |
73523 |
+ |
A-rich |
Low_complexity |
| scaffold1997 |
73800 |
73833 |
+ |
A-rich |
Low_complexity |
| scaffold1997 |
74469 |
74504 |
+ |
(T)n |
Simple_repeat |
| scaffold1997 |
74728 |
74795 |
+ |
(TTTAATT)n |
Simple_repeat |
| scaffold1997 |
74940 |
75030 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold1997 |
75288 |
75386 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold1997 |
75480 |
75686 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold1997 |
76514 |
76705 |
+ |
RS7696 |
Unspecified |
| scaffold1997 |
77564 |
77602 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1997 |
79133 |
79193 |
+ |
(TATAATT)n |
Simple_repeat |
| scaffold1997 |
79223 |
79338 |
+ |
RS5917 |
Unspecified |
| scaffold1997 |
80458 |
80492 |
+ |
(CAC)n |
Simple_repeat |
| scaffold1997 |
81484 |
81509 |
+ |
(TTG)n |
Simple_repeat |
| scaffold1997 |
81881 |
81951 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold1997 |
82113 |
82151 |
- |
RS172 |
Unspecified |
| scaffold1997 |
82257 |
82303 |
+ |
(ATATTA)n |
Simple_repeat |
| scaffold1997 |
82640 |
82679 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold1997 |
83096 |
83196 |
+ |
(ATTAATT)n |
Simple_repeat |
| scaffold1997 |
83327 |
83368 |
+ |
(TCTAA)n |
Simple_repeat |
| scaffold1997 |
84430 |
84713 |
- |
PL475 |
Unspecified |
| scaffold1997 |
87080 |
87641 |
- |
RS23 |
Unspecified |
| scaffold1997 |
87634 |
88919 |
+ |
RS260 |
Unspecified |
| scaffold1997 |
87634 |
88604 |
- |
PL475 |
Unspecified |
| scaffold1997 |
89108 |
89609 |
+ |
RS4087 |
Unspecified |
| scaffold1997 |
89609 |
90401 |
- |
RS23 |
Unspecified |
| scaffold1997 |
90147 |
90483 |
- |
RS23 |
Unspecified |
| scaffold1997 |
90461 |
90740 |
- |
RS23 |
Unspecified |
| scaffold1997 |
91175 |
91868 |
- |
RS141 |
Unspecified |
| scaffold1997 |
92381 |
93000 |
- |
RS141 |
Unspecified |
| scaffold1997 |
93073 |
94325 |
- |
RS141 |
Unspecified |
| scaffold1997 |
93424 |
94946 |
- |
RS88 |
Unspecified |
| scaffold1997 |
94217 |
95552 |
- |
RS249 |
Unspecified |
| scaffold1997 |
94638 |
95682 |
- |
RS238 |
Unspecified |
| scaffold1997 |
94822 |
96196 |
- |
RS27 |
Unspecified |