scaffold20073 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold20073 |
28 |
288 |
- |
Copia26-VV_I-int |
LTR/Copia |
| scaffold20073 |
494 |
1105 |
- |
COP2_I_MT-int |
LTR/Copia |
| scaffold20073 |
2101 |
2126 |
+ |
(CAATAG)n |
Simple_repeat |
| scaffold20073 |
2485 |
2637 |
+ |
RS14792 |
Unspecified |
| scaffold20073 |
2560 |
2652 |
+ |
RS1361 |
Unspecified |
| scaffold20073 |
2894 |
2912 |
+ |
(C)n |
Simple_repeat |
| scaffold20073 |
4065 |
4427 |
+ |
PL56 |
Unspecified |
| scaffold20073 |
5097 |
5613 |
- |
RS443 |
Unspecified |
| scaffold20073 |
5708 |
5747 |
+ |
(TCGTGTT)n |
Simple_repeat |
| scaffold20073 |
6715 |
6739 |
+ |
(T)n |
Simple_repeat |
| scaffold20073 |
6833 |
6872 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold20073 |
8431 |
8500 |
+ |
(TAT)n |
Simple_repeat |
| scaffold20073 |
8713 |
8730 |
+ |
(A)n |
Simple_repeat |
| scaffold20073 |
9340 |
9372 |
+ |
(TCTA)n |
Simple_repeat |
| scaffold20073 |
11296 |
12285 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold20073 |
11403 |
12174 |
- |
Copia-6_PD-I |
LTR/Copia |
| scaffold20073 |
12546 |
13368 |
- |
Copia-6_PD-I |
LTR/Copia |
| scaffold20073 |
13733 |
13803 |
- |
Copia-6_PD-I |
LTR/Copia |
| scaffold20073 |
13906 |
13956 |
- |
Copia-92_GM-I |
LTR/Copia |
| scaffold20073 |
14796 |
14976 |
- |
Copia-92_GM-I |
LTR/Copia |
| scaffold20073 |
15698 |
15741 |
+ |
(CTAA)n |
Simple_repeat |
| scaffold20073 |
16421 |
16483 |
+ |
(CAA)n |
Simple_repeat |
| scaffold20073 |
16457 |
16485 |
+ |
(CAAT)n |
Simple_repeat |
| scaffold20073 |
16498 |
17252 |
+ |
RS1838 |
Unspecified |
| scaffold20073 |
17986 |
18011 |
+ |
(T)n |
Simple_repeat |
| scaffold20073 |
18016 |
18070 |
+ |
(A)n |
Simple_repeat |
| scaffold20073 |
18220 |
18331 |
- |
RS1967 |
Unspecified |
| scaffold20073 |
18911 |
19016 |
- |
RS562 |
Unspecified |
| scaffold20073 |
18968 |
19055 |
- |
RS562 |
Unspecified |
| scaffold20073 |
19093 |
19634 |
- |
RS562 |
Unspecified |
| scaffold20073 |
20411 |
20441 |
+ |
(TTTCT)n |
Simple_repeat |
| scaffold20073 |
23657 |
23697 |
+ |
(ACGGAC)n |
Simple_repeat |
| scaffold20073 |
25767 |
26229 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold20073 |
26823 |
27152 |
+ |
RS600 |
Unspecified |
| scaffold20073 |
27159 |
27431 |
+ |
RS1 |
Unspecified |
| scaffold20073 |
27836 |
27891 |
+ |
(TTTAGGAT)n |
Simple_repeat |
| scaffold20073 |
28554 |
28724 |
+ |
RS9463 |
Unspecified |
| scaffold20073 |
28897 |
28918 |
+ |
(T)n |
Simple_repeat |
| scaffold20073 |
30520 |
30591 |
+ |
(TTTTTAA)n |
Simple_repeat |
| scaffold20073 |
31646 |
31670 |
+ |
(A)n |
Simple_repeat |
| scaffold20073 |
31821 |
32894 |
+ |
RS646 |
Unspecified |
| scaffold20073 |
33776 |
34070 |
+ |
(TTATAC)n |
Simple_repeat |
| scaffold20073 |
34113 |
34130 |
+ |
(A)n |
Simple_repeat |
| scaffold20073 |
34153 |
34304 |
+ |
(TTA)n |
Simple_repeat |
| scaffold20073 |
34671 |
34711 |
+ |
A-rich |
Low_complexity |
| scaffold20073 |
35644 |
35679 |
+ |
(TCCGG)n |
Simple_repeat |
| scaffold20073 |
36171 |
36577 |
+ |
RS1834 |
Unspecified |
| scaffold20073 |
37079 |
37743 |
- |
RS695 |
Unspecified |
| scaffold20073 |
37079 |
37667 |
+ |
PL60 |
Unspecified |
| scaffold20073 |
37106 |
37833 |
- |
RS530 |
Unspecified |
| scaffold20073 |
38320 |
38388 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold20073 |
38608 |
38649 |
+ |
(CTTTTT)n |
Simple_repeat |
| scaffold20073 |
39039 |
39095 |
- |
PL394 |
Unspecified |
| scaffold20073 |
39527 |
39588 |
+ |
A-rich |
Low_complexity |
| scaffold20073 |
40101 |
40625 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold20073 |
40781 |
41314 |
- |
RS3329 |
Unspecified |
| scaffold20073 |
42375 |
43127 |
- |
RS695 |
Unspecified |
| scaffold20073 |
42443 |
43078 |
- |
PL219 |
Unspecified |
| scaffold20073 |
42484 |
43217 |
- |
RS530 |
Unspecified |
| scaffold20073 |
44897 |
45041 |
+ |
RS8848 |
Unspecified |
| scaffold20073 |
44997 |
45156 |
+ |
RS8848 |
Unspecified |
| scaffold20073 |
45535 |
45618 |
- |
Copia-90_Mad-I |
LTR/Copia |
| scaffold20073 |
45555 |
45631 |
- |
ATGP5LTR |
LTR/Gypsy |
| scaffold20073 |
48364 |
48389 |
+ |
(A)n |
Simple_repeat |
| scaffold20073 |
49234 |
49403 |
+ |
RS9463 |
Unspecified |
| scaffold20073 |
51151 |
51674 |
- |
PL386 |
Unspecified |
| scaffold20073 |
52568 |
52597 |
+ |
(A)n |
Simple_repeat |
| scaffold20073 |
52732 |
52750 |
+ |
(G)n |
Simple_repeat |
| scaffold20073 |
53173 |
53782 |
+ |
RS265 |
Unspecified |
| scaffold20073 |
53819 |
54865 |
+ |
RS266 |
Unspecified |
| scaffold20073 |
55192 |
55226 |
+ |
A-rich |
Low_complexity |
| scaffold20073 |
55642 |
55837 |
+ |
RS3094 |
Unspecified |
| scaffold20073 |
56590 |
56646 |
+ |
(ACATACT)n |
Simple_repeat |
| scaffold20073 |
56641 |
56843 |
+ |
RS5718 |
Unspecified |
| scaffold20073 |
56836 |
56912 |
+ |
A-rich |
Low_complexity |
| scaffold20073 |
57029 |
57261 |
+ |
RS976 |
Unspecified |
| scaffold20073 |
57280 |
57542 |
+ |
RS109 |
Unspecified |
| scaffold20073 |
57561 |
57826 |
+ |
RS106 |
Unspecified |
| scaffold20073 |
57827 |
58015 |
- |
RS5479 |
Unspecified |
| scaffold20073 |
58071 |
58099 |
+ |
(AT)n |
Simple_repeat |
| scaffold20073 |
58190 |
58233 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold20073 |
59449 |
59540 |
+ |
(TGT)n |
Simple_repeat |
| scaffold20073 |
60305 |
60498 |
+ |
PL171 |
Unspecified |
| scaffold20073 |
60492 |
60789 |
- |
RS513 |
Unspecified |
| scaffold20073 |
61158 |
61210 |
+ |
(TTTTAGA)n |
Simple_repeat |
| scaffold20073 |
62109 |
62269 |
+ |
RS573 |
Unspecified |
| scaffold20073 |
62262 |
62356 |
+ |
SINE2-1_PD |
SINE/tRNA-RTE |
| scaffold20073 |
62793 |
62820 |
+ |
(GTTT)n |
Simple_repeat |
| scaffold20073 |
64113 |
64131 |
+ |
(T)n |
Simple_repeat |
| scaffold20073 |
65250 |
65429 |
- |
RS38 |
Unspecified |
| scaffold20073 |
65636 |
65690 |
+ |
(TATT)n |
Simple_repeat |
| scaffold20073 |
65928 |
66269 |
- |
RS221 |
Unspecified |
| scaffold20073 |
67836 |
68017 |
+ |
RS681 |
Unspecified |
| scaffold20073 |
68719 |
68804 |
+ |
(TATCAGA)n |
Simple_repeat |
| scaffold20073 |
69814 |
69847 |
+ |
A-rich |
Low_complexity |
| scaffold20073 |
71417 |
71631 |
+ |
RS9214 |
Unspecified |
| scaffold20073 |
71647 |
71690 |
+ |
(AAT)n |
Simple_repeat |
| scaffold20073 |
71713 |
71746 |
+ |
A-rich |
Low_complexity |
| scaffold20073 |
71841 |
71874 |
+ |
(T)n |
Simple_repeat |
| scaffold20073 |
71884 |
71938 |
+ |
A-rich |
Low_complexity |
| scaffold20073 |
72326 |
72387 |
+ |
A-rich |
Low_complexity |
| scaffold20073 |
72952 |
73130 |
- |
RS8450 |
Unspecified |
| scaffold20073 |
73134 |
73204 |
+ |
(TTC)n |
Simple_repeat |
| scaffold20073 |
73274 |
73587 |
+ |
RS5273 |
Unspecified |
| scaffold20073 |
73695 |
73722 |
+ |
(GAT)n |
Simple_repeat |
| scaffold20073 |
73825 |
73943 |
+ |
RS8450 |
Unspecified |
| scaffold20073 |
74536 |
74797 |
+ |
RS26 |
Unspecified |
| scaffold20073 |
74850 |
75031 |
+ |
RS128 |
Unspecified |
| scaffold20073 |
75293 |
75333 |
+ |
A-rich |
Low_complexity |
| scaffold20073 |
75573 |
75629 |
+ |
(TA)n |
Simple_repeat |
| scaffold20073 |
75712 |
75742 |
+ |
(TATTTA)n |
Simple_repeat |
| scaffold20073 |
75925 |
76095 |
- |
RS2072 |
Unspecified |
| scaffold20073 |
76216 |
76383 |
- |
RS18 |
Unspecified |
| scaffold20073 |
76414 |
76456 |
- |
RS18 |
Unspecified |
| scaffold20073 |
76597 |
76694 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold20073 |
76717 |
76805 |
+ |
(ATT)n |
Simple_repeat |
| scaffold20073 |
76808 |
76942 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold20073 |
76943 |
77023 |
+ |
(GTTCA)n |
Simple_repeat |
| scaffold20073 |
77024 |
77043 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold20073 |
77549 |
77762 |
- |
PL271 |
Unspecified |
| scaffold20073 |
77757 |
77916 |
+ |
PL271 |
Unspecified |
| scaffold20073 |
77917 |
77954 |
+ |
(A)n |
Simple_repeat |
| scaffold20073 |
78312 |
78466 |
- |
Copia-62_GM-LTR |
LTR/Copia |
| scaffold20073 |
78847 |
78892 |
+ |
(CCTGGA)n |
Simple_repeat |
| scaffold20073 |
78978 |
79021 |
+ |
(CCTGAG)n |
Simple_repeat |
| scaffold20073 |
79971 |
80010 |
+ |
(CTTCTTG)n |
Simple_repeat |
| scaffold20073 |
81738 |
81772 |
+ |
(TATGT)n |
Simple_repeat |
| scaffold20073 |
82194 |
83262 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold20073 |
83449 |
84619 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |