scaffold20874 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold20874 |
1 |
778 |
+ |
PL475 |
Unspecified |
| scaffold20874 |
875 |
905 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold20874 |
1039 |
2326 |
+ |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold20874 |
1406 |
2055 |
+ |
RS446 |
Unspecified |
| scaffold20874 |
3426 |
3646 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold20874 |
3732 |
3842 |
- |
RS3966 |
Unspecified |
| scaffold20874 |
4363 |
4382 |
+ |
(A)n |
Simple_repeat |
| scaffold20874 |
4406 |
4441 |
+ |
(TCTCTT)n |
Simple_repeat |
| scaffold20874 |
7792 |
7814 |
+ |
(A)n |
Simple_repeat |
| scaffold20874 |
7922 |
7944 |
+ |
(T)n |
Simple_repeat |
| scaffold20874 |
8099 |
8519 |
+ |
RS14836 |
Unspecified |
| scaffold20874 |
8992 |
9151 |
+ |
RS16572 |
Unspecified |
| scaffold20874 |
9905 |
10012 |
+ |
RS9794 |
Unspecified |
| scaffold20874 |
10328 |
10748 |
+ |
RS14836 |
Unspecified |
| scaffold20874 |
11221 |
11380 |
+ |
RS16572 |
Unspecified |
| scaffold20874 |
11628 |
11668 |
+ |
(CT)n |
Simple_repeat |
| scaffold20874 |
11715 |
11841 |
+ |
RS16056 |
Unspecified |
| scaffold20874 |
12222 |
12355 |
+ |
RS15434 |
Unspecified |
| scaffold20874 |
13064 |
13162 |
- |
MuDR-8_Mad |
DNA/MULE-MuDR |
| scaffold20874 |
13314 |
13458 |
- |
MuDR-8_Mad |
DNA/MULE-MuDR |
| scaffold20874 |
13648 |
13678 |
+ |
(CTTTC)n |
Simple_repeat |
| scaffold20874 |
13715 |
13763 |
+ |
G-rich |
Low_complexity |
| scaffold20874 |
13764 |
13780 |
+ |
GA-rich |
Low_complexity |
| scaffold20874 |
14466 |
14502 |
+ |
(TCTGT)n |
Simple_repeat |
| scaffold20874 |
18199 |
18240 |
+ |
(T)n |
Simple_repeat |
| scaffold20874 |
19334 |
20124 |
+ |
RS724 |
Unspecified |
| scaffold20874 |
20148 |
20189 |
- |
RS152 |
Unspecified |
| scaffold20874 |
20350 |
20402 |
+ |
(AATTTA)n |
Simple_repeat |
| scaffold20874 |
21244 |
21617 |
- |
RS614 |
Unspecified |
| scaffold20874 |
21642 |
21689 |
+ |
(T)n |
Simple_repeat |
| scaffold20874 |
22180 |
22257 |
+ |
(AATT)n |
Simple_repeat |
| scaffold20874 |
22337 |
22376 |
+ |
(TAGGTT)n |
Simple_repeat |
| scaffold20874 |
22580 |
22626 |
+ |
(TATA)n |
Simple_repeat |
| scaffold20874 |
24337 |
24389 |
+ |
A-rich |
Low_complexity |
| scaffold20874 |
25208 |
25239 |
+ |
(T)n |
Simple_repeat |
| scaffold20874 |
25888 |
25942 |
+ |
BARE-2_HV_LTR |
LTR/Copia |
| scaffold20874 |
26147 |
26164 |
+ |
(A)n |
Simple_repeat |
| scaffold20874 |
26496 |
26527 |
+ |
(TTTGCT)n |
Simple_repeat |
| scaffold20874 |
26551 |
26585 |
+ |
A-rich |
Low_complexity |
| scaffold20874 |
26638 |
26683 |
+ |
A-rich |
Low_complexity |
| scaffold20874 |
26802 |
26899 |
+ |
RS2064 |
Unspecified |
| scaffold20874 |
26968 |
27194 |
- |
RS18 |
Unspecified |
| scaffold20874 |
27615 |
27790 |
+ |
RS2064 |
Unspecified |
| scaffold20874 |
28804 |
28863 |
+ |
RS908 |
Unspecified |
| scaffold20874 |
28881 |
28916 |
+ |
(GACAC)n |
Simple_repeat |
| scaffold20874 |
29524 |
29845 |
- |
RS3221 |
Unspecified |
| scaffold20874 |
29945 |
30089 |
- |
RS1082 |
Unspecified |
| scaffold20874 |
30262 |
30316 |
+ |
A-rich |
Low_complexity |
| scaffold20874 |
30444 |
30499 |
- |
RS10224 |
Unspecified |
| scaffold20874 |
31197 |
31278 |
+ |
(ATT)n |
Simple_repeat |
| scaffold20874 |
31596 |
31844 |
+ |
RS1092 |
Unspecified |
| scaffold20874 |
31868 |
31938 |
+ |
RS1092 |
Unspecified |
| scaffold20874 |
32881 |
33027 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold20874 |
35744 |
35838 |
+ |
(ATA)n |
Simple_repeat |
| scaffold20874 |
35840 |
35928 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold20874 |
37678 |
37810 |
- |
RS2962 |
Unspecified |
| scaffold20874 |
37806 |
37968 |
+ |
RS26 |
Unspecified |
| scaffold20874 |
39344 |
39713 |
- |
PL488 |
Unspecified |
| scaffold20874 |
39683 |
40432 |
+ |
Copia52-PTR_I-int |
LTR/Copia |
| scaffold20874 |
40853 |
42442 |
+ |
Copia52-PTR_I-int |
LTR/Copia |
| scaffold20874 |
42706 |
42949 |
+ |
RS13726 |
Unspecified |
| scaffold20874 |
43077 |
43173 |
- |
RS453 |
Unspecified |
| scaffold20874 |
43266 |
43310 |
+ |
A-rich |
Low_complexity |
| scaffold20874 |
44174 |
44212 |
+ |
A-rich |
Low_complexity |
| scaffold20874 |
44372 |
44421 |
+ |
(ATTTTCT)n |
Simple_repeat |
| scaffold20874 |
44468 |
44501 |
+ |
(T)n |
Simple_repeat |
| scaffold20874 |
44706 |
44734 |
+ |
(T)n |
Simple_repeat |
| scaffold20874 |
44901 |
45076 |
+ |
RS295 |
Unspecified |
| scaffold20874 |
45113 |
45138 |
+ |
(A)n |
Simple_repeat |
| scaffold20874 |
45572 |
45591 |
+ |
(T)n |
Simple_repeat |
| scaffold20874 |
46251 |
46323 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold20874 |
46525 |
46610 |
+ |
(AGGTGGC)n |
Simple_repeat |
| scaffold20874 |
46630 |
46687 |
+ |
(T)n |
Simple_repeat |
| scaffold20874 |
46720 |
46754 |
+ |
(T)n |
Simple_repeat |
| scaffold20874 |
46767 |
46815 |
+ |
A-rich |
Low_complexity |
| scaffold20874 |
47325 |
47341 |
+ |
(T)n |
Simple_repeat |
| scaffold20874 |
48431 |
48695 |
+ |
RS356 |
Unspecified |
| scaffold20874 |
49267 |
49308 |
+ |
(CGAGTCC)n |
Simple_repeat |
| scaffold20874 |
50611 |
50737 |
+ |
RS16806 |
Unspecified |
| scaffold20874 |
51720 |
51756 |
+ |
(T)n |
Simple_repeat |
| scaffold20874 |
51720 |
51850 |
+ |
(T)n |
Simple_repeat |
| scaffold20874 |
51750 |
51850 |
+ |
RS17402 |
Unspecified |
| scaffold20874 |
52258 |
52301 |
+ |
PL108 |
Unspecified |
| scaffold20874 |
52263 |
52319 |
- |
PL32 |
Unspecified |
| scaffold20874 |
52357 |
52387 |
+ |
(CCACGA)n |
Simple_repeat |
| scaffold20874 |
52719 |
52859 |
+ |
RS15849 |
Unspecified |
| scaffold20874 |
53587 |
53611 |
+ |
(GCA)n |
Simple_repeat |
| scaffold20874 |
53928 |
53965 |
+ |
A-rich |
Low_complexity |
| scaffold20874 |
54346 |
54419 |
+ |
GA-rich |
Low_complexity |
| scaffold20874 |
54382 |
54444 |
+ |
(ATGAAGA)n |
Simple_repeat |
| scaffold20874 |
54588 |
54730 |
- |
RS18111 |
Unspecified |
| scaffold20874 |
54993 |
55142 |
- |
RS18111 |
Unspecified |
| scaffold20874 |
55947 |
56209 |
- |
RS18232 |
Unspecified |
| scaffold20874 |
56277 |
56333 |
+ |
RS3756 |
Unspecified |
| scaffold20874 |
56776 |
56807 |
+ |
(T)n |
Simple_repeat |
| scaffold20874 |
56959 |
57221 |
- |
RS18232 |
Unspecified |
| scaffold20874 |
57289 |
57345 |
+ |
RS3756 |
Unspecified |
| scaffold20874 |
57891 |
57953 |
+ |
A-rich |
Low_complexity |
| scaffold20874 |
58079 |
58120 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold20874 |
60934 |
61304 |
+ |
PL509 |
Unspecified |
| scaffold20874 |
61300 |
61471 |
+ |
RS6754 |
Unspecified |