scaffold2173 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2173 |
2 |
355 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold2173 |
5 |
332 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold2173 |
572 |
753 |
- |
PL911 |
Unspecified |
| scaffold2173 |
2250 |
2641 |
+ |
RS4060 |
Unspecified |
| scaffold2173 |
2974 |
2991 |
+ |
(C)n |
Simple_repeat |
| scaffold2173 |
4469 |
4588 |
+ |
LINE1J_MT |
LINE/L1 |
| scaffold2173 |
4577 |
5816 |
+ |
L1-15_GM |
LINE/L1 |
| scaffold2173 |
6611 |
6628 |
+ |
(A)n |
Simple_repeat |
| scaffold2173 |
7000 |
7038 |
+ |
(TATT)n |
Simple_repeat |
| scaffold2173 |
7990 |
8050 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold2173 |
8131 |
8161 |
+ |
(T)n |
Simple_repeat |
| scaffold2173 |
8487 |
9663 |
- |
RS306 |
Unspecified |
| scaffold2173 |
11449 |
11485 |
+ |
(T)n |
Simple_repeat |
| scaffold2173 |
11585 |
11644 |
+ |
PL701 |
Unspecified |
| scaffold2173 |
11780 |
11912 |
+ |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold2173 |
12745 |
12914 |
- |
RS6484 |
Unspecified |
| scaffold2173 |
13193 |
13288 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
| scaffold2173 |
13310 |
13401 |
+ |
(TAA)n |
Simple_repeat |
| scaffold2173 |
13403 |
13429 |
+ |
RS969 |
Unspecified |
| scaffold2173 |
13430 |
14021 |
+ |
RS2432 |
Unspecified |
| scaffold2173 |
13509 |
14181 |
+ |
RS969 |
Unspecified |
| scaffold2173 |
16426 |
16466 |
+ |
A-rich |
Low_complexity |
| scaffold2173 |
18018 |
18105 |
+ |
LINE1-24_ZM |
LINE/L1 |
| scaffold2173 |
18272 |
19097 |
+ |
L1-14_STu |
LINE/L1 |
| scaffold2173 |
19600 |
19701 |
+ |
L1-14_STu |
LINE/L1 |
| scaffold2173 |
20862 |
21363 |
- |
RS922 |
Unspecified |
| scaffold2173 |
21637 |
21675 |
+ |
(CTATAA)n |
Simple_repeat |
| scaffold2173 |
21877 |
21911 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold2173 |
21971 |
22205 |
+ |
RS1 |
Unspecified |
| scaffold2173 |
22671 |
22741 |
+ |
(AATATAA)n |
Simple_repeat |
| scaffold2173 |
23963 |
24262 |
- |
RS922 |
Unspecified |
| scaffold2173 |
24536 |
24574 |
+ |
(CTATAA)n |
Simple_repeat |
| scaffold2173 |
24776 |
24810 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold2173 |
24870 |
24978 |
+ |
RS1 |
Unspecified |
| scaffold2173 |
25204 |
25338 |
- |
Athila6B_I-int |
LTR/Gypsy |
| scaffold2173 |
25582 |
25613 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold2173 |
25806 |
25939 |
+ |
RS1 |
Unspecified |
| scaffold2173 |
26405 |
26475 |
+ |
(AATATAA)n |
Simple_repeat |
| scaffold2173 |
28015 |
28407 |
+ |
PL822 |
Unspecified |
| scaffold2173 |
29257 |
29337 |
+ |
(TGTTTA)n |
Simple_repeat |
| scaffold2173 |
29777 |
29813 |
+ |
(TGTACGTT)n |
Simple_repeat |
| scaffold2173 |
31664 |
31757 |
+ |
(A)n |
Simple_repeat |
| scaffold2173 |
32257 |
32486 |
+ |
RS18 |
Unspecified |
| scaffold2173 |
32741 |
32773 |
+ |
(TGTTA)n |
Simple_repeat |
| scaffold2173 |
34260 |
34297 |
+ |
(AATC)n |
Simple_repeat |
| scaffold2173 |
35130 |
35211 |
+ |
RS164 |
Unspecified |
| scaffold2173 |
35141 |
35209 |
- |
RS1716 |
Unspecified |
| scaffold2173 |
35208 |
35473 |
- |
RS3651 |
Unspecified |
| scaffold2173 |
35472 |
36071 |
- |
PL757 |
Unspecified |
| scaffold2173 |
36210 |
36236 |
+ |
(AAT)n |
Simple_repeat |
| scaffold2173 |
36599 |
37545 |
+ |
PL530 |
Unspecified |
| scaffold2173 |
37574 |
37634 |
+ |
(TTTCTCTC)n |
Simple_repeat |
| scaffold2173 |
37900 |
37971 |
+ |
(TTTTT)n |
Simple_repeat |
| scaffold2173 |
38170 |
38318 |
+ |
RS387 |
Unspecified |
| scaffold2173 |
39164 |
39207 |
+ |
(TTTTGA)n |
Simple_repeat |
| scaffold2173 |
39476 |
39525 |
+ |
(TAC)n |
Simple_repeat |
| scaffold2173 |
39610 |
40023 |
- |
RS6195 |
Unspecified |
| scaffold2173 |
40438 |
40491 |
+ |
A-rich |
Low_complexity |
| scaffold2173 |
40510 |
40563 |
- |
PL350 |
Unspecified |
| scaffold2173 |
40701 |
40754 |
+ |
A-rich |
Low_complexity |
| scaffold2173 |
40773 |
41256 |
- |
PL350 |
Unspecified |
| scaffold2173 |
41295 |
41379 |
+ |
A-rich |
Low_complexity |
| scaffold2173 |
41389 |
41930 |
+ |
PL628 |
Unspecified |
| scaffold2173 |
41887 |
42339 |
+ |
(TAAGTA)n |
Simple_repeat |
| scaffold2173 |
42349 |
42435 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold2173 |
44749 |
44803 |
+ |
(ATAGATC)n |
Simple_repeat |
| scaffold2173 |
45234 |
45413 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold2173 |
45418 |
45918 |
- |
RS9215 |
Unspecified |
| scaffold2173 |
45919 |
46121 |
+ |
PL959 |
Unspecified |
| scaffold2173 |
50792 |
51499 |
+ |
RS17978 |
Unspecified |